RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 TMEM183BQ1AE95 376 aa6.64□□□□□ -1.35
NPLOC4-219ENST00000576713 COX8CQ7Z4L0 72 aa6.64□□□□□ -1.35
NPLOC4-219ENST00000576713 TMEM183AQ8IXX5 376 aa6.64□□□□□ -1.35
NPLOC4-219ENST00000576713 ZNF680Q8NEM1 530 aa6.64□□□□□ -1.35
NPLOC4-219ENST00000576713 LYPD6BQ8NI32 183 aa6.64□□□□□ -1.35
NPLOC4-219ENST00000576713 NKX6-2Q9C056 277 aaPredicted RBP6.64□□□□□ -1.35
NPLOC4-219ENST00000576713 MANBALQ9NQG1 85 aa6.64□□□□□ -1.35
NPLOC4-219ENST00000576713 MRPL16Q9NX20 251 aaKnown RBP6.64□□□□□ -1.35
NPLOC4-219ENST00000576713 TRBV20OR9-2A0A075B6H5 130 aa6.63□□□□□ -1.35
NPLOC4-219ENST00000576713 TRAV21A0A0B4J279 112 aa6.63□□□□□ -1.35
NPLOC4-219ENST00000576713 TRBV6-1A0A0K0K1D8 114 aa6.63□□□□□ -1.35
NPLOC4-219ENST00000576713 SNURFLB1AK76 121 aa6.63□□□□□ -1.35
NPLOC4-219ENST00000576713 TEX46H3BTG2 121 aa6.63□□□□□ -1.35
NPLOC4-219ENST00000576713 K7EQM0 130 aa6.63□□□□□ -1.35
NPLOC4-219ENST00000576713 PFN1P07737 140 aaKnown RBP6.63□□□□□ -1.35
NPLOC4-219ENST00000576713 AKR1C3P42330 323 aa6.63□□□□□ -1.35
NPLOC4-219ENST00000576713 SMUG1Q53HV7 270 aa6.63□□□□□ -1.35
NPLOC4-219ENST00000576713 IBA57Q5T440 356 aaKnown RBP6.63□□□□□ -1.35
NPLOC4-219ENST00000576713 TMEM88Q6PEY1 159 aa6.63□□□□□ -1.35
NPLOC4-219ENST00000576713 FAM159AQ6UWV7 190 aa6.63□□□□□ -1.35
NPLOC4-219ENST00000576713 C11orf52Q96A22 123 aa6.63□□□□□ -1.35
NPLOC4-219ENST00000576713 FMC1Q96HJ9 113 aa6.63□□□□□ -1.35
NPLOC4-219ENST00000576713 TRGV1A0A0A0MS02 117 aa6.62□□□□□ -1.35
NPLOC4-219ENST00000576713 TEX48A0A1B0GUV7 120 aa6.62□□□□□ -1.35
NPLOC4-219ENST00000576713 RAB19A4D1S5 217 aa6.62□□□□□ -1.35
NPLOC4-219ENST00000576713 PGPEP1LA6NFU8 196 aa6.62□□□□□ -1.35
NPLOC4-219ENST00000576713 SH2D1AO60880 128 aa6.62□□□□□ -1.35
NPLOC4-219ENST00000576713 IGLV2-8P01709 118 aa6.62□□□□□ -1.35
NPLOC4-219ENST00000576713 BCL2P10415 239 aa6.62□□□□□ -1.35
NPLOC4-219ENST00000576713 RPL35P42766 123 aaKnown RBP6.62□□□□□ -1.35
NPLOC4-219ENST00000576713 UBE2G1P62253 170 aa6.62□□□□□ -1.35
NPLOC4-219ENST00000576713 MEF2BQ02080 365 aaPredicted RBP6.62□□□□□ -1.35
NPLOC4-219ENST00000576713 SAPCD1Q5SSQ6 148 aa6.62□□□□□ -1.35
NPLOC4-219ENST00000576713 POM121L12Q8N7R1 296 aa6.62□□□□□ -1.35
NPLOC4-219ENST00000576713 TCEAL7Q9BRU2 100 aa6.62□□□□□ -1.35
NPLOC4-219ENST00000576713 NDFIP1Q9BT67 221 aa6.62□□□□□ -1.35
NPLOC4-219ENST00000576713 KLK5Q9Y337 293 aaPredicted RBP6.62□□□□□ -1.35
NPLOC4-219ENST00000576713 DNAH11Q96DT5 4516 aa6.61□□□□□ -1.35
NPLOC4-219ENST00000576713 HECTD4Q9Y4D8 3996 aa6.61□□□□□ -1.35
NPLOC4-219ENST00000576713 FBLL1A6NHQ2 334 aaKnown RBP6.61□□□□□ -1.35
NPLOC4-219ENST00000576713 M0R036 132 aa6.61□□□□□ -1.35
NPLOC4-219ENST00000576713 IGHV3-53P01767 116 aa6.61□□□□□ -1.35
NPLOC4-219ENST00000576713 RNASE3P12724 160 aaKnown RBP6.61□□□□□ -1.35
NPLOC4-219ENST00000576713 PPT1P50897 306 aa6.61□□□□□ -1.35
NPLOC4-219ENST00000576713 ZNF415Q09FC8 603 aa6.61□□□□□ -1.35
NPLOC4-219ENST00000576713 ZNF674Q2M3X9 581 aa6.61□□□□□ -1.35
NPLOC4-219ENST00000576713 TEX261Q6UWH6 196 aa6.61□□□□□ -1.35
NPLOC4-219ENST00000576713 ZFP30Q9Y2G7 519 aa6.61□□□□□ -1.35
NPLOC4-219ENST00000576713 PKD1P98161 4303 aa6.6□□□□□ -1.35
NPLOC4-219ENST00000576713 GRIFINA4D1Z8 144 aa6.6□□□□□ -1.35
NPLOC4-219ENST00000576713 KRBOX1C9JBD0 128 aa6.6□□□□□ -1.35
NPLOC4-219ENST00000576713 F5H768 121 aa6.6□□□□□ -1.35
NPLOC4-219ENST00000576713 LY6G6CO95867 125 aa6.6□□□□□ -1.35
NPLOC4-219ENST00000576713 ATP5G1P05496 136 aa6.6□□□□□ -1.35
NPLOC4-219ENST00000576713 NPSP0C0P6 89 aa6.6□□□□□ -1.35
NPLOC4-219ENST00000576713 SFTA3P0C7M3 94 aa6.6□□□□□ -1.35
NPLOC4-219ENST00000576713 SUMO2P61956 95 aaKnown RBP6.6□□□□□ -1.35
NPLOC4-219ENST00000576713 RPL19P84098 196 aaKnown RBP6.6□□□□□ -1.35
NPLOC4-219ENST00000576713 CENPWQ5EE01 88 aa6.6□□□□□ -1.35
NPLOC4-219ENST00000576713 VSIG2Q96IQ7 327 aa6.6□□□□□ -1.35
NPLOC4-219ENST00000576713 C9orf85Q96MD7 179 aa6.6□□□□□ -1.35
NPLOC4-219ENST00000576713 KRTAP4-7Q9BYR0 210 aa6.6□□□□□ -1.35
NPLOC4-219ENST00000576713 VAX2Q9UIW0 290 aa6.6□□□□□ -1.35
NPLOC4-219ENST00000576713 TMSB15BA0A087X1C1 80 aa6.59□□□□□ -1.35
NPLOC4-219ENST00000576713 A0A0J9YY99 117 aa6.59□□□□□ -1.35
NPLOC4-219ENST00000576713 FABP5P3A8MUU1 101 aa6.59□□□□□ -1.35
NPLOC4-219ENST00000576713 BAGE2Q86Y30 109 aa6.59□□□□□ -1.35
NPLOC4-219ENST00000576713 ZNF479Q96JC4 524 aa6.59□□□□□ -1.35
NPLOC4-219ENST00000576713 C18orf15Q96N68 181 aa6.59□□□□□ -1.35
NPLOC4-219ENST00000576713 SDF2L1Q9HCN8 221 aa6.59□□□□□ -1.35
NPLOC4-219ENST00000576713 TRGV2A0A075B6R0 118 aa6.58□□□□□ -1.36
NPLOC4-219ENST00000576713 TRAV26-1A0A087WT03 109 aa6.58□□□□□ -1.36
NPLOC4-219ENST00000576713 RBFOX3A6NFN3 312 aa6.58□□□□□ -1.36
NPLOC4-219ENST00000576713 B4DEV8 164 aa6.58□□□□□ -1.36
NPLOC4-219ENST00000576713 C9JQL5 133 aa6.58□□□□□ -1.36
NPLOC4-219ENST00000576713 ORM1P02763 201 aa6.58□□□□□ -1.36
NPLOC4-219ENST00000576713 OR5I1Q13606 314 aa6.58□□□□□ -1.36
NPLOC4-219ENST00000576713 LGALS9BQ3B8N2 356 aa6.58□□□□□ -1.36
NPLOC4-219ENST00000576713 ZNF506Q5JVG8 444 aa6.58□□□□□ -1.36
NPLOC4-219ENST00000576713 FAM162BQ5T6X4 162 aa6.58□□□□□ -1.36
NPLOC4-219ENST00000576713 PRR27Q6MZM9 219 aa6.58□□□□□ -1.36
NPLOC4-219ENST00000576713 RASL10AQ92737 203 aa6.58□□□□□ -1.36
NPLOC4-219ENST00000576713 KCNS1Q96KK3 526 aa6.58□□□□□ -1.36
NPLOC4-219ENST00000576713 NDUFAF3Q9BU61 184 aa6.58□□□□□ -1.36
NPLOC4-219ENST00000576713 MED9Q9NWA0 146 aa6.58□□□□□ -1.36
NPLOC4-219ENST00000576713 MUC4Q99102 2169 aa6.57□□□□□ -1.36
NPLOC4-219ENST00000576713 H3BVH4 76 aa6.57□□□□□ -1.36
NPLOC4-219ENST00000576713 K7EN84 100 aa6.57□□□□□ -1.36
NPLOC4-219ENST00000576713 M0R2P5 195 aa6.57□□□□□ -1.36
NPLOC4-219ENST00000576713 PDE6DO43924 150 aa6.57□□□□□ -1.36
NPLOC4-219ENST00000576713 IFNA1P01562 189 aa6.57□□□□□ -1.36
NPLOC4-219ENST00000576713 LGALS9CQ6DKI2 356 aa6.57□□□□□ -1.36
NPLOC4-219ENST00000576713 TXNDC17Q9BRA2 123 aa6.57□□□□□ -1.36
NPLOC4-219ENST00000576713 SPXQ9BT56 116 aa6.57□□□□□ -1.36
NPLOC4-219ENST00000576713 KRTAP4-9Q9BYQ8 210 aa6.57□□□□□ -1.36
NPLOC4-219ENST00000576713 JPT2Q9H910 190 aa6.57□□□□□ -1.36
NPLOC4-219ENST00000576713 C19orf71A6NCJ1 209 aa6.56□□□□□ -1.36
NPLOC4-219ENST00000576713 C9JCJ5 164 aa6.56□□□□□ -1.36
NPLOC4-219ENST00000576713 S100A9P06702 114 aaKnown RBP6.56□□□□□ -1.36
NPLOC4-219ENST00000576713 ARMS2P0C7Q2 107 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms