RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 CFAP161Q6P656 301 aa10.2□□□□□ -0.78
PCDHGB3-201ENST00000576222 KIAA1549Q9HCM3 1950 aa10.2□□□□□ -0.78
PCDHGB3-201ENST00000576222 TCTEX1D4Q5JR98 221 aa10.2□□□□□ -0.78
PCDHGB3-201ENST00000576222 LTBP2Q14767 1821 aa10.2□□□□□ -0.78
PCDHGB3-201ENST00000576222 IGHV1OR15-1A0A075B7D0 117 aa10.19□□□□□ -0.78
PCDHGB3-201ENST00000576222 IGFL3Q6UXB1 125 aa10.19□□□□□ -0.78
PCDHGB3-201ENST00000576222 CHCHD5Q9BSY4 110 aa10.19□□□□□ -0.78
PCDHGB3-201ENST00000576222 MYCNOSP40205 109 aa10.19□□□□□ -0.78
PCDHGB3-201ENST00000576222 IGFBPL1Q8WX77 278 aa10.19□□□□□ -0.78
PCDHGB3-201ENST00000576222 ATG2AQ2TAZ0 1938 aa10.19□□□□□ -0.78
PCDHGB3-201ENST00000576222 BUB3O43684 328 aa10.19□□□□□ -0.78
PCDHGB3-201ENST00000576222 LINC01620Q4KN68 170 aa10.19□□□□□ -0.78
PCDHGB3-201ENST00000576222 CITED1Q99966 193 aa10.19□□□□□ -0.78
PCDHGB3-201ENST00000576222 IGKV2D-26A0A0A0MRZ7 120 aa10.19□□□□□ -0.78
PCDHGB3-201ENST00000576222 F6UB75 175 aa10.19□□□□□ -0.78
PCDHGB3-201ENST00000576222 IGHG4P01861 327 aa10.19□□□□□ -0.78
PCDHGB3-201ENST00000576222 S100A7L2Q5SY68 101 aa10.19□□□□□ -0.78
PCDHGB3-201ENST00000576222 BAALCQ8WXS3 180 aa10.19□□□□□ -0.78
PCDHGB3-201ENST00000576222 TRAV12-2A0A075B6T6 113 aa10.18□□□□□ -0.78
PCDHGB3-201ENST00000576222 MUSTN1Q8IVN3 82 aa10.18□□□□□ -0.78
PCDHGB3-201ENST00000576222 TOMM6Q96B49 74 aa10.18□□□□□ -0.78
PCDHGB3-201ENST00000576222 TRGV1A0A0A0MS02 117 aa10.18□□□□□ -0.78
PCDHGB3-201ENST00000576222 TRGV4A0A0C4DH28 118 aa10.18□□□□□ -0.78
PCDHGB3-201ENST00000576222 IGLV1-47P01700 117 aa10.18□□□□□ -0.78
PCDHGB3-201ENST00000576222 RHOHQ15669 191 aa10.18□□□□□ -0.78
PCDHGB3-201ENST00000576222 Q6ZUT4 128 aa10.18□□□□□ -0.78
PCDHGB3-201ENST00000576222 LINC00574Q9H8X3 128 aa10.18□□□□□ -0.78
PCDHGB3-201ENST00000576222 BPESC1Q9GZL8 116 aa10.17□□□□□ -0.78
PCDHGB3-201ENST00000576222 ZNF80P51504 273 aaPredicted RBP10.17□□□□□ -0.78
PCDHGB3-201ENST00000576222 ZFP2Q6ZN57 461 aa10.17□□□□□ -0.78
PCDHGB3-201ENST00000576222 NPBQ8NG41 125 aa10.17□□□□□ -0.78
PCDHGB3-201ENST00000576222 RNF183Q96D59 192 aa10.17□□□□□ -0.78
PCDHGB3-201ENST00000576222 MUC22E2RYF6 1773 aaPredicted RBP10.17□□□□□ -0.78
PCDHGB3-201ENST00000576222 TANC2Q9HCD6 1990 aa10.17□□□□□ -0.78
PCDHGB3-201ENST00000576222 VWC2LB2RUY7 222 aa10.16□□□□□ -0.78
PCDHGB3-201ENST00000576222 MT-ATP8P03928 68 aa10.16□□□□□ -0.78
PCDHGB3-201ENST00000576222 NAV3Q8IVL0 2385 aa10.16□□□□□ -0.78
PCDHGB3-201ENST00000576222 C11orf86A6NJI1 115 aa10.16□□□□□ -0.78
PCDHGB3-201ENST00000576222 MSRB2Q9Y3D2 182 aa10.16□□□□□ -0.78
PCDHGB3-201ENST00000576222 ANKHD1Q8IWZ3 2542 aaKnown RBP10.16□□□□□ -0.78
PCDHGB3-201ENST00000576222 RHODO00212 210 aa10.16□□□□□ -0.78
PCDHGB3-201ENST00000576222 IGHV3-53P01767 116 aa10.16□□□□□ -0.78
PCDHGB3-201ENST00000576222 RNASE13Q5GAN3 156 aaKnown RBP10.16□□□□□ -0.78
PCDHGB3-201ENST00000576222 COX6B1P14854 86 aa10.16□□□□□ -0.78
PCDHGB3-201ENST00000576222 PIP4P2Q8N4L2 257 aa10.16□□□□□ -0.78
PCDHGB3-201ENST00000576222 IGHV7-81A0A0B4J1V7 117 aa10.15□□□□□ -0.78
PCDHGB3-201ENST00000576222 IGLC6P0CF74 106 aa10.15□□□□□ -0.78
PCDHGB3-201ENST00000576222 RUSC1-AS1Q66K80 236 aa10.15□□□□□ -0.78
PCDHGB3-201ENST00000576222 URB1-AS1Q96HZ7 61 aa10.15□□□□□ -0.78
PCDHGB3-201ENST00000576222 A0A0J9YXV3 536 aa10.15□□□□□ -0.78
PCDHGB3-201ENST00000576222 SYNJ2BPP57105 145 aa10.15□□□□□ -0.78
PCDHGB3-201ENST00000576222 PIFOQ8TCI5 191 aa10.15□□□□□ -0.78
PCDHGB3-201ENST00000576222 PRSS47A8MTI9 375 aa10.15□□□□□ -0.79
PCDHGB3-201ENST00000576222 SOCS3O14543 225 aa10.15□□□□□ -0.79
PCDHGB3-201ENST00000576222 DEFB131AP59861 70 aa10.15□□□□□ -0.79
PCDHGB3-201ENST00000576222 RPL39P62891 51 aaKnown RBP10.15□□□□□ -0.79
PCDHGB3-201ENST00000576222 SRSF2Q01130 221 aaKnown RBP10.15□□□□□ -0.79
PCDHGB3-201ENST00000576222 NDUFA11Q86Y39 141 aa10.15□□□□□ -0.79
PCDHGB3-201ENST00000576222 DNAJC30Q96LL9 226 aa10.15□□□□□ -0.79
PCDHGB3-201ENST00000576222 SPRY4Q9C004 299 aa10.15□□□□□ -0.79
PCDHGB3-201ENST00000576222 WISP2O76076 250 aa10.14□□□□□ -0.79
PCDHGB3-201ENST00000576222 CRIP1P50238 77 aa10.14□□□□□ -0.79
PCDHGB3-201ENST00000576222 C11orf68Q9H3H3 251 aaKnown RBP10.14□□□□□ -0.79
PCDHGB3-201ENST00000576222 C6orf226Q5I0X4 101 aa10.14□□□□□ -0.79
PCDHGB3-201ENST00000576222 GHRHP01286 108 aa10.14□□□□□ -0.79
PCDHGB3-201ENST00000576222 SUMO4Q6EEV6 95 aa10.14□□□□□ -0.79
PCDHGB3-201ENST00000576222 MAPKAPK5-AS1Q8N8E1 139 aa10.14□□□□□ -0.79
PCDHGB3-201ENST00000576222 TTC28Q96AY4 2481 aa10.14□□□□□ -0.79
PCDHGB3-201ENST00000576222 TCL1BO95988 128 aa10.14□□□□□ -0.79
PCDHGB3-201ENST00000576222 SPG11Q96JI7 2443 aa10.13□□□□□ -0.79
PCDHGB3-201ENST00000576222 IGHV3-38A0A0C4DH36 116 aa10.13□□□□□ -0.79
PCDHGB3-201ENST00000576222 MALP21145 153 aa10.13□□□□□ -0.79
PCDHGB3-201ENST00000576222 PRR30Q53SZ7 412 aaPredicted RBP10.13□□□□□ -0.79
PCDHGB3-201ENST00000576222 IGHV3-16A0A0C4DH30 117 aa10.13□□□□□ -0.79
PCDHGB3-201ENST00000576222 IGHV7-4-1A0A0J9YVY3 117 aa10.13□□□□□ -0.79
PCDHGB3-201ENST00000576222 IGFL2Q6UWQ7 119 aa10.13□□□□□ -0.79
PCDHGB3-201ENST00000576222 WT1P19544 449 aaPredicted RBP10.13□□□□□ -0.79
PCDHGB3-201ENST00000576222 SEM1Q6ZVN7 128 aa10.13□□□□□ -0.79
PCDHGB3-201ENST00000576222 FANCD2OSQ96PS1 177 aa10.13□□□□□ -0.79
PCDHGB3-201ENST00000576222 ACYP1P07311 99 aa10.12□□□□□ -0.79
PCDHGB3-201ENST00000576222 C9orf47Q6ZRZ4 202 aa10.12□□□□□ -0.79
PCDHGB3-201ENST00000576222 U3KQK5 164 aa10.12□□□□□ -0.79
PCDHGB3-201ENST00000576222 TRACP01848 142 aa10.12□□□□□ -0.79
PCDHGB3-201ENST00000576222 ICOSQ9Y6W8 199 aa10.12□□□□□ -0.79
PCDHGB3-201ENST00000576222 INSP01308 110 aa10.12□□□□□ -0.79
PCDHGB3-201ENST00000576222 UFSP1Q6NVU6 142 aa10.12□□□□□ -0.79
PCDHGB3-201ENST00000576222 LAMTOR3Q9UHA4 124 aa10.12□□□□□ -0.79
PCDHGB3-201ENST00000576222 NACAE9PAV3 2078 aa10.12□□□□□ -0.79
PCDHGB3-201ENST00000576222 TRBV10-2A0A0K0K1G8 114 aa10.11□□□□□ -0.79
PCDHGB3-201ENST00000576222 IGLV2-11P01706 119 aa10.11□□□□□ -0.79
PCDHGB3-201ENST00000576222 TIMM17AQ99595 171 aa10.11□□□□□ -0.79
PCDHGB3-201ENST00000576222 JPT2Q9H910 190 aa10.11□□□□□ -0.79
PCDHGB3-201ENST00000576222 A0A1W2PRX2 142 aa10.11□□□□□ -0.79
PCDHGB3-201ENST00000576222 UBE2E2Q96LR5 201 aa10.11□□□□□ -0.79
PCDHGB3-201ENST00000576222 BAALC-AS2P0C853 105 aa10.11□□□□□ -0.79
PCDHGB3-201ENST00000576222 IGHV1-69P01742 117 aa10.1□□□□□ -0.79
PCDHGB3-201ENST00000576222 FAM236AA0A1B0GUQ0 79 aa10.09□□□□□ -0.79
PCDHGB3-201ENST00000576222 FAM236BA0A1B0GV22 79 aa10.09□□□□□ -0.79
PCDHGB3-201ENST00000576222 A0A1W2PNU3 283 aaPredicted RBP10.09□□□□□ -0.79
PCDHGB3-201ENST00000576222 PLA2G2CQ5R387 149 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms