RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 MBD3L1Q8WWY6 194 aa12.15□□□□□ -0.46
CTDNEP1-207ENST00000572043 TMSB15BA0A087X1C1 80 aa12.14□□□□□ -0.47
CTDNEP1-207ENST00000572043 GRIFINA4D1Z8 144 aa12.14□□□□□ -0.47
CTDNEP1-207ENST00000572043 TPT1P13693 172 aaKnown RBP12.14□□□□□ -0.47
CTDNEP1-207ENST00000572043 EIF5AP63241 154 aaKnown RBP12.14□□□□□ -0.47
CTDNEP1-207ENST00000572043 LGALSLQ3ZCW2 172 aaPredicted RBP12.14□□□□□ -0.47
CTDNEP1-207ENST00000572043 SLC25A29Q8N8R3 303 aa12.14□□□□□ -0.47
CTDNEP1-207ENST00000572043 ZFP30Q9Y2G7 519 aa12.14□□□□□ -0.47
CTDNEP1-207ENST00000572043 TNFRSF18Q9Y5U5 241 aa12.14□□□□□ -0.47
CTDNEP1-207ENST00000572043 SCO2A0A1W2PP80 73 aa12.13□□□□□ -0.47
CTDNEP1-207ENST00000572043 C16orf90A8MZG2 172 aa12.13□□□□□ -0.47
CTDNEP1-207ENST00000572043 H3BVH4 76 aa12.13□□□□□ -0.47
CTDNEP1-207ENST00000572043 H2AFB1P0C5Y9 115 aa12.13□□□□□ -0.47
CTDNEP1-207ENST00000572043 PRADC1Q9BSG0 188 aa12.13□□□□□ -0.47
CTDNEP1-207ENST00000572043 MUC4Q99102 2169 aa12.13□□□□□ -0.47
CTDNEP1-207ENST00000572043 KRBOX1C9JBD0 128 aa12.12□□□□□ -0.47
CTDNEP1-207ENST00000572043 LTAP01374 205 aa12.12□□□□□ -0.47
CTDNEP1-207ENST00000572043 MED14OSP0DP75 135 aa12.12□□□□□ -0.47
CTDNEP1-207ENST00000572043 FAM162BQ5T6X4 162 aa12.12□□□□□ -0.47
CTDNEP1-207ENST00000572043 TCEAL7Q9BRU2 100 aa12.12□□□□□ -0.47
CTDNEP1-207ENST00000572043 LY96Q9Y6Y9 160 aa12.12□□□□□ -0.47
CTDNEP1-207ENST00000572043 RHOHQ15669 191 aa12.11□□□□□ -0.47
CTDNEP1-207ENST00000572043 PTH2Q96A98 100 aa12.11□□□□□ -0.47
CTDNEP1-207ENST00000572043 JPT2Q9H910 190 aa12.11□□□□□ -0.47
CTDNEP1-207ENST00000572043 TRBV6-1A0A0K0K1D8 114 aa12.1□□□□□ -0.47
CTDNEP1-207ENST00000572043 ARMS2P0C7Q2 107 aa12.1□□□□□ -0.47
CTDNEP1-207ENST00000572043 DMRTA1Q5VZB9 504 aa12.1□□□□□ -0.47
CTDNEP1-207ENST00000572043 SPATA12Q7Z6I5 190 aa12.1□□□□□ -0.47
CTDNEP1-207ENST00000572043 PARLQ9H300 379 aa12.1□□□□□ -0.47
CTDNEP1-207ENST00000572043 TRBV6-4A0A1B0GX49 114 aa12.09□□□□□ -0.47
CTDNEP1-207ENST00000572043 CIDEAO60543 219 aa12.09□□□□□ -0.47
CTDNEP1-207ENST00000572043 CCL20P78556 96 aa12.09□□□□□ -0.47
CTDNEP1-207ENST00000572043 ZNF674Q2M3X9 581 aa12.09□□□□□ -0.47
CTDNEP1-207ENST00000572043 Q6ZSN1 163 aa12.09□□□□□ -0.47
CTDNEP1-207ENST00000572043 COX8CQ7Z4L0 72 aa12.09□□□□□ -0.47
CTDNEP1-207ENST00000572043 SH2D6Q7Z4S9 175 aa12.09□□□□□ -0.47
CTDNEP1-207ENST00000572043 SAMD10Q9BYL1 202 aa12.09□□□□□ -0.47
CTDNEP1-207ENST00000572043 IL36BQ9NZH7 164 aa12.09□□□□□ -0.47
CTDNEP1-207ENST00000572043 GNG13Q9P2W3 67 aa12.09□□□□□ -0.47
CTDNEP1-207ENST00000572043 TRAV9-2A0A087WT02 112 aa12.08□□□□□ -0.48
CTDNEP1-207ENST00000572043 A8MWV9 139 aa12.08□□□□□ -0.48
CTDNEP1-207ENST00000572043 MGST1P10620 155 aaKnown RBP12.08□□□□□ -0.48
CTDNEP1-207ENST00000572043 BTF3P20290 206 aaKnown RBP12.08□□□□□ -0.48
CTDNEP1-207ENST00000572043 TCTE3Q8IZS6 198 aa12.08□□□□□ -0.48
CTDNEP1-207ENST00000572043 hCG_2014768A0A024R1R8 64 aa12.07□□□□□ -0.48
CTDNEP1-207ENST00000572043 GAGE12JA6NER3 117 aa12.07□□□□□ -0.48
CTDNEP1-207ENST00000572043 M0R381 172 aa12.07□□□□□ -0.48
CTDNEP1-207ENST00000572043 EVI2AP22794 236 aa12.07□□□□□ -0.48
CTDNEP1-207ENST00000572043 GAGE1Q13065 139 aa12.07□□□□□ -0.48
CTDNEP1-207ENST00000572043 GAGE4Q13068 117 aa12.07□□□□□ -0.48
CTDNEP1-207ENST00000572043 GAGE5Q13069 117 aa12.07□□□□□ -0.48
CTDNEP1-207ENST00000572043 KIAA1109Q2LD37 5005 aa12.07□□□□□ -0.48
CTDNEP1-207ENST00000572043 LINC01559Q495D7 138 aa12.07□□□□□ -0.48
CTDNEP1-207ENST00000572043 GAGE13Q4V321 117 aa12.07□□□□□ -0.48
CTDNEP1-207ENST00000572043 Q6ZRN7 208 aaPredicted RBP12.07□□□□□ -0.48
CTDNEP1-207ENST00000572043 BAGE2Q86Y30 109 aa12.07□□□□□ -0.48
CTDNEP1-207ENST00000572043 SYT8Q8NBV8 401 aa12.07□□□□□ -0.48
CTDNEP1-207ENST00000572043 PHLDA3Q9Y5J5 127 aa12.07□□□□□ -0.48
CTDNEP1-207ENST00000572043 PKD1P98161 4303 aa12.07□□□□□ -0.48
CTDNEP1-207ENST00000572043 HERC2O95714 4834 aa12.07□□□□□ -0.48
CTDNEP1-207ENST00000572043 DNAH10OSP0CZ25 163 aa12.06□□□□□ -0.48
CTDNEP1-207ENST00000572043 KRTAP10-2P60368 255 aa12.06□□□□□ -0.48
CTDNEP1-207ENST00000572043 RPL19P84098 196 aaKnown RBP12.06□□□□□ -0.48
CTDNEP1-207ENST00000572043 OR10J3Q5JRS4 329 aa12.06□□□□□ -0.48
CTDNEP1-207ENST00000572043 FAM74A4Q5TZK3 123 aa12.06□□□□□ -0.48
CTDNEP1-207ENST00000572043 PRR27Q6MZM9 219 aa12.06□□□□□ -0.48
CTDNEP1-207ENST00000572043 DYNC1H1Q14204 4646 aaKnown RBP12.05□□□□□ -0.48
CTDNEP1-207ENST00000572043 A0A087WWL8 130 aa12.05□□□□□ -0.48
CTDNEP1-207ENST00000572043 S100A9P06702 114 aaKnown RBP12.05□□□□□ -0.48
CTDNEP1-207ENST00000572043 CRYGDP07320 174 aa12.05□□□□□ -0.48
CTDNEP1-207ENST00000572043 DNLZQ5SXM8 178 aa12.05□□□□□ -0.48
CTDNEP1-207ENST00000572043 EIF5AL1Q6IS14 154 aaKnown RBP12.05□□□□□ -0.48
CTDNEP1-207ENST00000572043 Q6ZNX1 250 aa12.05□□□□□ -0.48
CTDNEP1-207ENST00000572043 C14orf178Q8N769 122 aaPredicted RBP12.05□□□□□ -0.48
CTDNEP1-207ENST00000572043 ATP6V0E2Q8NHE4 81 aa12.05□□□□□ -0.48
CTDNEP1-207ENST00000572043 MSRB1Q9NZV6 116 aa12.05□□□□□ -0.48
CTDNEP1-207ENST00000572043 DNAH11Q96DT5 4516 aa12.05□□□□□ -0.48
CTDNEP1-207ENST00000572043 TRAV8-6A0A0B4J262 113 aa12.04□□□□□ -0.48
CTDNEP1-207ENST00000572043 IGHV3-38A0A0C4DH36 116 aa12.04□□□□□ -0.48
CTDNEP1-207ENST00000572043 FUSP35637 526 aaKnown RBP eCLIP12.04□□□□□ -0.48
CTDNEP1-207ENST00000572043 TIRAPP58753 221 aa12.04□□□□□ -0.48
CTDNEP1-207ENST00000572043 PIK3CD-AS1Q5SR53 167 aa12.04□□□□□ -0.48
CTDNEP1-207ENST00000572043 UFSP1Q6NVU6 142 aa12.04□□□□□ -0.48
CTDNEP1-207ENST00000572043 ZFP2Q6ZN57 461 aa12.04□□□□□ -0.48
CTDNEP1-207ENST00000572043 MANBALQ9NQG1 85 aa12.04□□□□□ -0.48
CTDNEP1-207ENST00000572043 Q9UF83 564 aa12.04□□□□□ -0.48
CTDNEP1-207ENST00000572043 IGHV3-30P01768 117 aa12.03□□□□□ -0.48
CTDNEP1-207ENST00000572043 IGHV3-33P01772 117 aa12.03□□□□□ -0.48
CTDNEP1-207ENST00000572043 C1QBP02746 253 aa12.03□□□□□ -0.48
CTDNEP1-207ENST00000572043 IGHV3-30-3P0DP02 117 aa12.03□□□□□ -0.48
CTDNEP1-207ENST00000572043 IGHV3-30-5P0DP03 117 aa12.03□□□□□ -0.48
CTDNEP1-207ENST00000572043 RAB5CP51148 216 aa12.03□□□□□ -0.48
CTDNEP1-207ENST00000572043 NFE4Q86UQ8 179 aa12.03□□□□□ -0.48
CTDNEP1-207ENST00000572043 DERL1Q9BUN8 251 aa12.03□□□□□ -0.48
CTDNEP1-207ENST00000572043 SCRT2Q9NQ03 307 aa12.03□□□□□ -0.48
CTDNEP1-207ENST00000572043 PKHD1P08F94 4074 aa12.02□□□□□ -0.49
CTDNEP1-207ENST00000572043 RPL35P42766 123 aaKnown RBP12.02□□□□□ -0.49
CTDNEP1-207ENST00000572043 SULT1A2P50226 295 aa12.02□□□□□ -0.49
CTDNEP1-207ENST00000572043 LELP1Q5T871 98 aa12.02□□□□□ -0.49
CTDNEP1-207ENST00000572043 ZFP82Q8N141 532 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms