RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 TREM1Q9NP99 234 aa9.05□□□□□ -0.96
SPG7-221ENST00000569720 ICOSQ9Y6W8 199 aa9.05□□□□□ -0.96
SPG7-221ENST00000569720 SIVA1O15304 175 aa9.04□□□□□ -0.96
SPG7-221ENST00000569720 PAX4O43316 350 aa9.04□□□□□ -0.96
SPG7-221ENST00000569720 GNG4P50150 75 aa9.04□□□□□ -0.96
SPG7-221ENST00000569720 GNG5P63218 68 aa9.04□□□□□ -0.96
SPG7-221ENST00000569720 SLAQ13239 276 aa9.04□□□□□ -0.96
SPG7-221ENST00000569720 SMUG1Q53HV7 270 aa9.04□□□□□ -0.96
SPG7-221ENST00000569720 COMMD7Q86VX2 200 aa9.04□□□□□ -0.96
SPG7-221ENST00000569720 BAGE2Q86Y30 109 aa9.04□□□□□ -0.96
SPG7-221ENST00000569720 VGLL1Q99990 258 aa9.04□□□□□ -0.96
SPG7-221ENST00000569720 RPH3ALQ9UNE2 315 aa9.04□□□□□ -0.96
SPG7-221ENST00000569720 IGHV1OR15-1A0A075B7D0 117 aa9.03□□□□□ -0.96
SPG7-221ENST00000569720 IGKV2-40A0A087WW87 121 aaPredicted RBP9.03□□□□□ -0.96
SPG7-221ENST00000569720 ZNF727A8MUV8 499 aa9.03□□□□□ -0.96
SPG7-221ENST00000569720 IGKV2D-40P01614 121 aaPredicted RBP9.03□□□□□ -0.96
SPG7-221ENST00000569720 Q8N1X5 172 aa9.03□□□□□ -0.96
SPG7-221ENST00000569720 MLST8Q9BVC4 326 aa9.03□□□□□ -0.96
SPG7-221ENST00000569720 PARLQ9H300 379 aa9.03□□□□□ -0.96
SPG7-221ENST00000569720 PRO0255Q9UI72 69 aa9.03□□□□□ -0.96
SPG7-221ENST00000569720 TMEM218A2RU14 115 aa9.02□□□□□ -0.97
SPG7-221ENST00000569720 KRBOX1C9JBD0 128 aa9.02□□□□□ -0.97
SPG7-221ENST00000569720 EREGO14944 169 aa9.02□□□□□ -0.97
SPG7-221ENST00000569720 LINC00315P59091 139 aa9.02□□□□□ -0.97
SPG7-221ENST00000569720 PNRC1Q12796 327 aaPredicted RBP9.02□□□□□ -0.97
SPG7-221ENST00000569720 TMEM241Q24JQ0 296 aa9.02□□□□□ -0.97
SPG7-221ENST00000569720 PRNTQ86SH4 94 aa9.02□□□□□ -0.97
SPG7-221ENST00000569720 Q86TA4 180 aa9.02□□□□□ -0.97
SPG7-221ENST00000569720 ZFAND2AQ8N6M9 145 aa9.02□□□□□ -0.97
SPG7-221ENST00000569720 SMIM7Q9BQ49 75 aa9.02□□□□□ -0.97
SPG7-221ENST00000569720 SEC11CQ9BY50 192 aa9.02□□□□□ -0.97
SPG7-221ENST00000569720 TRAV21A0A0B4J279 112 aa9.01□□□□□ -0.97
SPG7-221ENST00000569720 FABP5P3A8MUU1 101 aa9.01□□□□□ -0.97
SPG7-221ENST00000569720 NXPH4O95158 308 aa9.01□□□□□ -0.97
SPG7-221ENST00000569720 IGHV3-53P01767 116 aa9.01□□□□□ -0.97
SPG7-221ENST00000569720 KRTAP10-2P60368 255 aa9.01□□□□□ -0.97
SPG7-221ENST00000569720 ZNF415Q09FC8 603 aa9.01□□□□□ -0.97
SPG7-221ENST00000569720 Q6AWC8 147 aa9.01□□□□□ -0.97
SPG7-221ENST00000569720 SCRT2Q9NQ03 307 aa9.01□□□□□ -0.97
SPG7-221ENST00000569720 MRPL16Q9NX20 251 aaKnown RBP9.01□□□□□ -0.97
SPG7-221ENST00000569720 NAT8Q9UHE5 227 aa9.01□□□□□ -0.97
SPG7-221ENST00000569720 TP53TG3Q9ULZ0 132 aa9.01□□□□□ -0.97
SPG7-221ENST00000569720 HHLA3Q9XRX5 114 aa9.01□□□□□ -0.97
SPG7-221ENST00000569720 TRAV8-1A0A0A6YYK1 113 aa9□□□□□ -0.97
SPG7-221ENST00000569720 TRAV34A0A0B4J273 112 aa9□□□□□ -0.97
SPG7-221ENST00000569720 PFN1P07737 140 aaKnown RBP9□□□□□ -0.97
SPG7-221ENST00000569720 SFTA3P0C7M3 94 aa9□□□□□ -0.97
SPG7-221ENST00000569720 SRSF3P84103 164 aaKnown RBP9□□□□□ -0.97
SPG7-221ENST00000569720 MRPL23Q16540 153 aaKnown RBP9□□□□□ -0.97
SPG7-221ENST00000569720 PRR9Q5T870 116 aa9□□□□□ -0.97
SPG7-221ENST00000569720 LINC00479Q96M42 142 aa9□□□□□ -0.97
SPG7-221ENST00000569720 TRAV9-2A0A087WT02 112 aa8.99□□□□□ -0.97
SPG7-221ENST00000569720 CRYBA4P53673 196 aa8.99□□□□□ -0.97
SPG7-221ENST00000569720 ERVFC1-1P60608 527 aa8.99□□□□□ -0.97
SPG7-221ENST00000569720 ZNF674Q2M3X9 581 aa8.99□□□□□ -0.97
SPG7-221ENST00000569720 CENPWQ5EE01 88 aa8.99□□□□□ -0.97
SPG7-221ENST00000569720 FAM162BQ5T6X4 162 aa8.99□□□□□ -0.97
SPG7-221ENST00000569720 NFE4Q86UQ8 179 aa8.99□□□□□ -0.97
SPG7-221ENST00000569720 DAZAP1Q96EP5 407 aaKnown RBP8.99□□□□□ -0.97
SPG7-221ENST00000569720 KCNS1Q96KK3 526 aa8.99□□□□□ -0.97
SPG7-221ENST00000569720 C8orf49Q96NF6 230 aa8.99□□□□□ -0.97
SPG7-221ENST00000569720 TRGV4A0A0C4DH28 118 aa8.98□□□□□ -0.97
SPG7-221ENST00000569720 B4DEV8 164 aa8.98□□□□□ -0.97
SPG7-221ENST00000569720 C9JQL5 133 aa8.98□□□□□ -0.97
SPG7-221ENST00000569720 GCGP01275 180 aa8.98□□□□□ -0.97
SPG7-221ENST00000569720 FHL2Q14192 279 aa8.98□□□□□ -0.97
SPG7-221ENST00000569720 C10orf91Q5T1B1 145 aa8.98□□□□□ -0.97
SPG7-221ENST00000569720 LYPD5Q6UWN5 251 aa8.98□□□□□ -0.97
SPG7-221ENST00000569720 Q6ZQT7 251 aa8.98□□□□□ -0.97
SPG7-221ENST00000569720 FAM231DQ6ZW35 169 aa8.98□□□□□ -0.97
SPG7-221ENST00000569720 NEGR1Q7Z3B1 354 aa8.98□□□□□ -0.97
SPG7-221ENST00000569720 Q8TAT8 98 aa8.98□□□□□ -0.97
SPG7-221ENST00000569720 DERL1Q9BUN8 251 aa8.98□□□□□ -0.97
SPG7-221ENST00000569720 SDF2L1Q9HCN8 221 aa8.98□□□□□ -0.97
SPG7-221ENST00000569720 PGPEP1Q9NXJ5 209 aa8.98□□□□□ -0.97
SPG7-221ENST00000569720 XKRY2A2RUG3 117 aa8.97□□□□□ -0.97
SPG7-221ENST00000569720 F8W036 122 aa8.97□□□□□ -0.97
SPG7-221ENST00000569720 CXCL1P09341 107 aa8.97□□□□□ -0.97
SPG7-221ENST00000569720 SRIP30626 198 aa8.97□□□□□ -0.97
SPG7-221ENST00000569720 CEBPGP53567 150 aa8.97□□□□□ -0.97
SPG7-221ENST00000569720 TDRG1Q3Y452 100 aa8.97□□□□□ -0.97
SPG7-221ENST00000569720 MUC21Q5SSG8 566 aa8.97□□□□□ -0.97
SPG7-221ENST00000569720 FAM159AQ6UWV7 190 aa8.97□□□□□ -0.97
SPG7-221ENST00000569720 Q6ZRN7 208 aaPredicted RBP8.97□□□□□ -0.97
SPG7-221ENST00000569720 OCC1Q8TAD7 63 aa8.97□□□□□ -0.97
SPG7-221ENST00000569720 TVP23CQ96ET8 276 aa8.97□□□□□ -0.97
SPG7-221ENST00000569720 SPXQ9BT56 116 aa8.97□□□□□ -0.97
SPG7-221ENST00000569720 TRBV20OR9-2A0A075B6H5 130 aa8.96□□□□□ -0.98
SPG7-221ENST00000569720 TRGV11A0A075B6L2 103 aa8.96□□□□□ -0.98
SPG7-221ENST00000569720 K7EP13 123 aa8.96□□□□□ -0.98
SPG7-221ENST00000569720 PPP1R2P9O14990 202 aa8.96□□□□□ -0.98
SPG7-221ENST00000569720 IGLV2-8P01709 118 aa8.96□□□□□ -0.98
SPG7-221ENST00000569720 RPS20P60866 119 aaKnown RBP8.96□□□□□ -0.98
SPG7-221ENST00000569720 CDPF1Q6NVV7 123 aa8.96□□□□□ -0.98
SPG7-221ENST00000569720 LINC01551Q86U37 167 aa8.96□□□□□ -0.98
SPG7-221ENST00000569720 C15orf54Q8N8G6 183 aa8.96□□□□□ -0.98
SPG7-221ENST00000569720 SGK494Q96LW2 274 aa8.96□□□□□ -0.98
SPG7-221ENST00000569720 CARHSP1Q9Y2V2 147 aaKnown RBP8.96□□□□□ -0.98
SPG7-221ENST00000569720 ORM1P02763 201 aa8.95□□□□□ -0.98
SPG7-221ENST00000569720 CT83Q5H943 113 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms