RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 GAFA1Q96PS6 74 aa4.05□□□□□ -1.76
SMG1-211ENST00000565324 TRAV4A0A0B4J268 109 aa4.05□□□□□ -1.76
SMG1-211ENST00000565324 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.05□□□□□ -1.76
SMG1-211ENST00000565324 PRB3Q04118 309 aaPredicted RBP4.05□□□□□ -1.76
SMG1-211ENST00000565324 C3orf22Q8N5N4 141 aa4.05□□□□□ -1.76
SMG1-211ENST00000565324 LINC00311Q8N616 119 aa4.05□□□□□ -1.76
SMG1-211ENST00000565324 FAM236DA0A1B0GTK5 79 aa4.04□□□□□ -1.76
SMG1-211ENST00000565324 FAM236CP0DP71 79 aa4.04□□□□□ -1.76
SMG1-211ENST00000565324 CD59P13987 128 aa4.04□□□□□ -1.76
SMG1-211ENST00000565324 DKK4Q9UBT3 224 aa4.04□□□□□ -1.76
SMG1-211ENST00000565324 MUC4Q99102 2169 aa4.04□□□□□ -1.76
SMG1-211ENST00000565324 IGHV3-16A0A0C4DH30 117 aa4.04□□□□□ -1.76
SMG1-211ENST00000565324 E9PLD3 99 aa4.04□□□□□ -1.76
SMG1-211ENST00000565324 ETV2O00321 342 aaPredicted RBP4.04□□□□□ -1.76
SMG1-211ENST00000565324 XCL1P47992 114 aa4.04□□□□□ -1.76
SMG1-211ENST00000565324 ZMAT4Q9H898 229 aa4.04□□□□□ -1.76
SMG1-211ENST00000565324 IGHV7-4-1A0A0J9YVY3 117 aa4.04□□□□□ -1.76
SMG1-211ENST00000565324 BUB3O43684 328 aa4.04□□□□□ -1.76
SMG1-211ENST00000565324 DEFB105AQ8NG35 78 aa4.04□□□□□ -1.76
SMG1-211ENST00000565324 ZNF503Q96F45 646 aa4.04□□□□□ -1.76
SMG1-211ENST00000565324 DSCAMO60469 2012 aa4.04□□□□□ -1.76
SMG1-211ENST00000565324 Q6ZRM9 215 aa4.04□□□□□ -1.76
SMG1-211ENST00000565324 PCP2Q8IVA1 136 aa4.04□□□□□ -1.76
SMG1-211ENST00000565324 TFF1P04155 84 aa4.04□□□□□ -1.76
SMG1-211ENST00000565324 C11orf86A6NJI1 115 aa4.04□□□□□ -1.76
SMG1-211ENST00000565324 LYNX1G3V0Z9 82 aa4.04□□□□□ -1.76
SMG1-211ENST00000565324 LYNX1P0DP58 116 aa4.04□□□□□ -1.76
SMG1-211ENST00000565324 ATP1A1-AS1Q5TC04 95 aa4.04□□□□□ -1.76
SMG1-211ENST00000565324 Q8N1Y9 231 aa4.04□□□□□ -1.76
SMG1-211ENST00000565324 Q8TCH9 128 aa4.04□□□□□ -1.76
SMG1-211ENST00000565324 FGF23Q9GZV9 251 aaPredicted RBP4.04□□□□□ -1.76
SMG1-211ENST00000565324 H3BUA1 57 aa4.04□□□□□ -1.76
SMG1-211ENST00000565324 C9orf47Q6ZRZ4 202 aa4.04□□□□□ -1.76
SMG1-211ENST00000565324 SRCAPQ6ZRS2 3230 aa4.03□□□□□ -1.76
SMG1-211ENST00000565324 DEFB121Q5J5C9 76 aa4.03□□□□□ -1.76
SMG1-211ENST00000565324 TMEM61Q8N0U2 210 aa4.03□□□□□ -1.76
SMG1-211ENST00000565324 KLK9Q9UKQ9 250 aa4.03□□□□□ -1.76
SMG1-211ENST00000565324 HIST2H2BCQ6DN03 193 aa4.03□□□□□ -1.76
SMG1-211ENST00000565324 EFNA2O43921 213 aa4.03□□□□□ -1.76
SMG1-211ENST00000565324 RPL18AQ02543 176 aaKnown RBP4.03□□□□□ -1.76
SMG1-211ENST00000565324 CFHR3Q02985 330 aa4.03□□□□□ -1.76
SMG1-211ENST00000565324 FOXE3Q13461 319 aa4.03□□□□□ -1.76
SMG1-211ENST00000565324 MBD3L4A6NDZ8 208 aaPredicted RBP4.03□□□□□ -1.76
SMG1-211ENST00000565324 MBD3L3A6NE82 208 aaPredicted RBP4.03□□□□□ -1.76
SMG1-211ENST00000565324 MBD3L5A6NJ08 208 aaPredicted RBP4.03□□□□□ -1.76
SMG1-211ENST00000565324 WFDC2Q14508 124 aa4.03□□□□□ -1.76
SMG1-211ENST00000565324 FOXL2NBQ6ZUU3 175 aa4.03□□□□□ -1.76
SMG1-211ENST00000565324 MBD3L2Q8NHZ7 208 aaPredicted RBP4.03□□□□□ -1.76
SMG1-211ENST00000565324 TRAV12-2A0A075B6T6 113 aa4.03□□□□□ -1.76
SMG1-211ENST00000565324 TIRAPP58753 221 aa4.03□□□□□ -1.76
SMG1-211ENST00000565324 IGF2BP2-AS1Q96M15 143 aa4.03□□□□□ -1.76
SMG1-211ENST00000565324 CASC2Q6XLA1 102 aa4.03□□□□□ -1.76
SMG1-211ENST00000565324 KIR2DL5BQ8NHK3 375 aa4.03□□□□□ -1.76
SMG1-211ENST00000565324 IGKV1-39P01597 117 aa4.02□□□□□ -1.77
SMG1-211ENST00000565324 IGKV1D-39P04432 117 aa4.02□□□□□ -1.77
SMG1-211ENST00000565324 FAM120AOSQ5T036 256 aa4.02□□□□□ -1.77
SMG1-211ENST00000565324 DIRC1Q969H9 104 aa4.02□□□□□ -1.77
SMG1-211ENST00000565324 MED14OSP0DP75 135 aa4.02□□□□□ -1.77
SMG1-211ENST00000565324 UPK3BQ9BT76 320 aa4.02□□□□□ -1.77
SMG1-211ENST00000565324 TM2D2Q9BX73 214 aa4.02□□□□□ -1.77
SMG1-211ENST00000565324 ATP6V0E1O15342 81 aa4.02□□□□□ -1.77
SMG1-211ENST00000565324 PRR31Q5SQ13 230 aa4.02□□□□□ -1.77
SMG1-211ENST00000565324 TIMM17AQ99595 171 aa4.02□□□□□ -1.77
SMG1-211ENST00000565324 MRPS36P82909 103 aaKnown RBP4.02□□□□□ -1.77
SMG1-211ENST00000565324 K7EQD1 137 aa4.02□□□□□ -1.77
SMG1-211ENST00000565324 IGKV4-1P06312 121 aa4.02□□□□□ -1.77
SMG1-211ENST00000565324 CSRP1P21291 193 aaKnown RBP4.02□□□□□ -1.77
SMG1-211ENST00000565324 C3orf56Q8N813 242 aa4.02□□□□□ -1.77
SMG1-211ENST00000565324 USP17L23D6RBM5 183 aa4.02□□□□□ -1.77
SMG1-211ENST00000565324 NDUFA1O15239 70 aa4.02□□□□□ -1.77
SMG1-211ENST00000565324 ZNF726P1Q15940 193 aa4.02□□□□□ -1.77
SMG1-211ENST00000565324 IGFL4Q6B9Z1 124 aa4.02□□□□□ -1.77
SMG1-211ENST00000565324 RNASE8Q8TDE3 154 aaKnown RBP4.02□□□□□ -1.77
SMG1-211ENST00000565324 TOMM6Q96B49 74 aa4.02□□□□□ -1.77
SMG1-211ENST00000565324 PRR30Q53SZ7 412 aaPredicted RBP4.02□□□□□ -1.77
SMG1-211ENST00000565324 TEX36Q5VZQ5 186 aa4.01□□□□□ -1.77
SMG1-211ENST00000565324 IGHV1-69P01742 117 aa4.01□□□□□ -1.77
SMG1-211ENST00000565324 ELANEP08246 267 aa4.01□□□□□ -1.77
SMG1-211ENST00000565324 WT1-ASQ06250 92 aa4.01□□□□□ -1.77
SMG1-211ENST00000565324 CAMK2N2Q96S95 79 aa4.01□□□□□ -1.77
SMG1-211ENST00000565324 IGHV3-38A0A0C4DH36 116 aa4.01□□□□□ -1.77
SMG1-211ENST00000565324 IGKV1-6A0A0C4DH72 117 aa4.01□□□□□ -1.77
SMG1-211ENST00000565324 CTRLP40313 264 aa4.01□□□□□ -1.77
SMG1-211ENST00000565324 FLVCR1-AS1Q8TAF5 88 aa4.01□□□□□ -1.77
SMG1-211ENST00000565324 IGKV2D-24A0A075B6R9 120 aa4.01□□□□□ -1.77
SMG1-211ENST00000565324 K7EN84 100 aa4.01□□□□□ -1.77
SMG1-211ENST00000565324 CLPSP04118 112 aa4.01□□□□□ -1.77
SMG1-211ENST00000565324 PRB4P10163 310 aaPredicted RBP4.01□□□□□ -1.77
SMG1-211ENST00000565324 TET2Q6N021 2002 aaPredicted RBP4.01□□□□□ -1.77
SMG1-211ENST00000565324 RIF1Q5UIP0 2472 aaKnown RBP4.01□□□□□ -1.77
SMG1-211ENST00000565324 TRBV7-3A0A075B6L6 115 aa4.01□□□□□ -1.77
SMG1-211ENST00000565324 IGHV4-28A0A0C4DH34 117 aa4.01□□□□□ -1.77
SMG1-211ENST00000565324 CSPG4Q6UVK1 2322 aa4.01□□□□□ -1.77
SMG1-211ENST00000565324 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.01□□□□□ -1.77
SMG1-211ENST00000565324 IGKV2-29A2NJV5 120 aaPredicted RBP4.01□□□□□ -1.77
SMG1-211ENST00000565324 FXYD2P54710 66 aa4.01□□□□□ -1.77
SMG1-211ENST00000565324 BRD3OSQ6XYD6 125 aa4.01□□□□□ -1.77
SMG1-211ENST00000565324 PCNX3Q9H6A9 2034 aa4.01□□□□□ -1.77
SMG1-211ENST00000565324 MSMBP08118 114 aa4.01□□□□□ -1.77
SMG1-211ENST00000565324 ODF1Q14990 250 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 583.4 ms