RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 MAP1LC3B2A6NCE7 125 aa11.98□□□□□ -0.49
NME3-205ENST00000563854 G3V3Q6 166 aa11.98□□□□□ -0.49
NME3-205ENST00000563854 RNASE3P12724 160 aaKnown RBP11.98□□□□□ -0.49
NME3-205ENST00000563854 MAP1LC3BQ9GZQ8 125 aa11.98□□□□□ -0.49
NME3-205ENST00000563854 FAM74A7A6NL05 159 aa11.97□□□□□ -0.49
NME3-205ENST00000563854 ASIPP42127 132 aa11.97□□□□□ -0.49
NME3-205ENST00000563854 OR10J3Q5JRS4 329 aa11.97□□□□□ -0.49
NME3-205ENST00000563854 IGKV3D-20A0A0C4DH25 116 aa11.96□□□□□ -0.49
NME3-205ENST00000563854 IGHV3-38A0A0C4DH36 116 aa11.96□□□□□ -0.49
NME3-205ENST00000563854 TRBV6-4A0A1B0GX49 114 aa11.96□□□□□ -0.49
NME3-205ENST00000563854 FABP5P3A8MUU1 101 aa11.96□□□□□ -0.49
NME3-205ENST00000563854 LGALSLQ3ZCW2 172 aaPredicted RBP11.96□□□□□ -0.49
NME3-205ENST00000563854 CYTL1Q9NRR1 136 aa11.96□□□□□ -0.49
NME3-205ENST00000563854 APOBP04114 4563 aaKnown RBP11.95□□□□□ -0.5
NME3-205ENST00000563854 A0A087WTM6 91 aa11.95□□□□□ -0.5
NME3-205ENST00000563854 TRAV8-6A0A0B4J262 113 aa11.95□□□□□ -0.5
NME3-205ENST00000563854 B4DEV8 164 aa11.95□□□□□ -0.5
NME3-205ENST00000563854 K7EP13 123 aa11.95□□□□□ -0.5
NME3-205ENST00000563854 M0R036 132 aa11.95□□□□□ -0.5
NME3-205ENST00000563854 CIDEAO60543 219 aa11.95□□□□□ -0.5
NME3-205ENST00000563854 UBE2G1P62253 170 aa11.95□□□□□ -0.5
NME3-205ENST00000563854 C10orf126Q8N4M7 172 aa11.95□□□□□ -0.5
NME3-205ENST00000563854 HIST1H2BAQ96A08 127 aa11.95□□□□□ -0.5
NME3-205ENST00000563854 H3BVH4 76 aa11.94□□□□□ -0.5
NME3-205ENST00000563854 MGST1P10620 155 aaKnown RBP11.94□□□□□ -0.5
NME3-205ENST00000563854 TIRAPP58753 221 aa11.94□□□□□ -0.5
NME3-205ENST00000563854 CST9LP1Q5W188 147 aa11.94□□□□□ -0.5
NME3-205ENST00000563854 STOML3Q8TAV4 291 aa11.94□□□□□ -0.5
NME3-205ENST00000563854 ZC2HC1AQ96GY0 325 aa11.94□□□□□ -0.5
NME3-205ENST00000563854 NKX6-2Q9C056 277 aaPredicted RBP11.94□□□□□ -0.5
NME3-205ENST00000563854 PARLQ9H300 379 aa11.94□□□□□ -0.5
NME3-205ENST00000563854 SCRT2Q9NQ03 307 aa11.94□□□□□ -0.5
NME3-205ENST00000563854 PGPEP1Q9NXJ5 209 aa11.94□□□□□ -0.5
NME3-205ENST00000563854 GRIFINA4D1Z8 144 aa11.93□□□□□ -0.5
NME3-205ENST00000563854 GAGE12JA6NER3 117 aa11.93□□□□□ -0.5
NME3-205ENST00000563854 PSCAO43653 123 aa11.93□□□□□ -0.5
NME3-205ENST00000563854 IGHV3-30P01768 117 aa11.93□□□□□ -0.5
NME3-205ENST00000563854 IGHV3-33P01772 117 aa11.93□□□□□ -0.5
NME3-205ENST00000563854 IGHV3-30-3P0DP02 117 aa11.93□□□□□ -0.5
NME3-205ENST00000563854 IGHV3-30-5P0DP03 117 aa11.93□□□□□ -0.5
NME3-205ENST00000563854 FHITP49789 147 aa11.93□□□□□ -0.5
NME3-205ENST00000563854 GAGE1Q13065 139 aa11.93□□□□□ -0.5
NME3-205ENST00000563854 GAGE4Q13068 117 aa11.93□□□□□ -0.5
NME3-205ENST00000563854 GAGE5Q13069 117 aa11.93□□□□□ -0.5
NME3-205ENST00000563854 GAGE13Q4V321 117 aa11.93□□□□□ -0.5
NME3-205ENST00000563854 ATP6V0E2Q8NHE4 81 aa11.93□□□□□ -0.5
NME3-205ENST00000563854 PTH2Q96A98 100 aa11.93□□□□□ -0.5
NME3-205ENST00000563854 Q9HAA7 133 aa11.93□□□□□ -0.5
NME3-205ENST00000563854 DNAH5Q8TE73 4624 aa11.92□□□□□ -0.5
NME3-205ENST00000563854 TMSB15BA0A087X1C1 80 aa11.92□□□□□ -0.5
NME3-205ENST00000563854 A0A1B0GV50 99 aa11.92□□□□□ -0.5
NME3-205ENST00000563854 A8MWV9 139 aa11.92□□□□□ -0.5
NME3-205ENST00000563854 SH2D1AO60880 128 aa11.92□□□□□ -0.5
NME3-205ENST00000563854 LINC01556Q5JQF7 62 aa11.92□□□□□ -0.5
NME3-205ENST00000563854 Q6ZSN1 163 aa11.92□□□□□ -0.5
NME3-205ENST00000563854 Q8N1X5 172 aa11.92□□□□□ -0.5
NME3-205ENST00000563854 FMC1Q96HJ9 113 aa11.92□□□□□ -0.5
NME3-205ENST00000563854 JPT2Q9H910 190 aa11.92□□□□□ -0.5
NME3-205ENST00000563854 AKR1C3P42330 323 aa11.91□□□□□ -0.5
NME3-205ENST00000563854 LELP1Q5T871 98 aa11.91□□□□□ -0.5
NME3-205ENST00000563854 CDPF1Q6NVV7 123 aa11.91□□□□□ -0.5
NME3-205ENST00000563854 FAM213BQ8TBF2 198 aa11.91□□□□□ -0.5
NME3-205ENST00000563854 GTSF1LQ9H1H1 148 aa11.91□□□□□ -0.5
NME3-205ENST00000563854 KRBOX1C9JBD0 128 aa11.9□□□□□ -0.5
NME3-205ENST00000563854 ARMS2P0C7Q2 107 aa11.9□□□□□ -0.5
NME3-205ENST00000563854 CRIP1P50238 77 aa11.9□□□□□ -0.5
NME3-205ENST00000563854 FAM162BQ5T6X4 162 aa11.9□□□□□ -0.5
NME3-205ENST00000563854 FAM74A4Q5TZK3 123 aa11.9□□□□□ -0.5
NME3-205ENST00000563854 KCNRGQ8N5I3 272 aa11.9□□□□□ -0.5
NME3-205ENST00000563854 SYT8Q8NBV8 401 aa11.9□□□□□ -0.5
NME3-205ENST00000563854 SAMD10Q9BYL1 202 aa11.9□□□□□ -0.5
NME3-205ENST00000563854 IL36BQ9NZH7 164 aa11.9□□□□□ -0.5
NME3-205ENST00000563854 ZFP30Q9Y2G7 519 aa11.9□□□□□ -0.5
NME3-205ENST00000563854 PAGE4O60829 102 aa11.89□□□□□ -0.51
NME3-205ENST00000563854 DMRTA1Q5VZB9 504 aa11.89□□□□□ -0.51
NME3-205ENST00000563854 ZFP2Q6ZN57 461 aa11.89□□□□□ -0.51
NME3-205ENST00000563854 OR11H4Q8NGC9 324 aa11.89□□□□□ -0.51
NME3-205ENST00000563854 ZNF345Q14585 488 aa11.88□□□□□ -0.51
NME3-205ENST00000563854 C14orf178Q8N769 122 aaPredicted RBP11.88□□□□□ -0.51
NME3-205ENST00000563854 SFT2D1Q8WV19 159 aa11.88□□□□□ -0.51
NME3-205ENST00000563854 ZNF471Q9BX82 626 aaPredicted RBP11.88□□□□□ -0.51
NME3-205ENST00000563854 A0A087WWL8 130 aa11.87□□□□□ -0.51
NME3-205ENST00000563854 KANTRA0A1W2PQU2 76 aa11.87□□□□□ -0.51
NME3-205ENST00000563854 IBA57-AS1B1ANH7 110 aa11.87□□□□□ -0.51
NME3-205ENST00000563854 M0R381 172 aa11.87□□□□□ -0.51
NME3-205ENST00000563854 TPT1P13693 172 aaKnown RBP11.87□□□□□ -0.51
NME3-205ENST00000563854 PIK3CD-AS1Q5SR53 167 aa11.87□□□□□ -0.51
NME3-205ENST00000563854 Q8N3U1 123 aa11.87□□□□□ -0.51
NME3-205ENST00000563854 PHLDA3Q9Y5J5 127 aa11.87□□□□□ -0.51
NME3-205ENST00000563854 RHODO00212 210 aa11.86□□□□□ -0.51
NME3-205ENST00000563854 LTAP01374 205 aa11.86□□□□□ -0.51
NME3-205ENST00000563854 KRTAP10-1P60331 282 aa11.86□□□□□ -0.51
NME3-205ENST00000563854 TCEAL7Q9BRU2 100 aa11.86□□□□□ -0.51
NME3-205ENST00000563854 Q9UF83 564 aa11.86□□□□□ -0.51
NME3-205ENST00000563854 BOLA1Q9Y3E2 137 aa11.86□□□□□ -0.51
NME3-205ENST00000563854 SCO2A0A1W2PP80 73 aa11.85□□□□□ -0.51
NME3-205ENST00000563854 BCL2L11O43521 198 aa11.85□□□□□ -0.51
NME3-205ENST00000563854 PFDN1O60925 122 aa11.85□□□□□ -0.51
NME3-205ENST00000563854 SEC11BP0C7V7 166 aa11.85□□□□□ -0.51
NME3-205ENST00000563854 ZNF674Q2M3X9 581 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms