RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 FAM107BQ9H098 131 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 TMEM191AQ9H0A3 160 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 NIT2Q9NQR4 276 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 TAS2R8Q9NYW2 309 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 COMMD3Q9UBI1 195 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 BOKQ9UMX3 212 aaPredicted RBP0.72□□□□□ -2.29
LINC00557-201ENST00000563184 DNAJC15Q9Y5T4 150 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 ZDBF2Q9HCK1 2354 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 AGLP35573 1532 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 ERICH3Q5RHP9 1530 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 DLC1Q96QB1 1528 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 NINQ8N4C6 2090 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 MED14O60244 1454 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 TCOF1Q13428 1488 aaKnown RBP0.72□□□□□ -2.29
LINC00557-201ENST00000563184 SHANK2Q9UPX8 1470 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 RAPGEF2Q9Y4G8 1499 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 ERBINQ96RT1 1412 aa0.72□□□□□ -2.29
LINC00557-201ENST00000563184 A0A0C4DFX4 3053 aa0.71□□□□□ -2.3
LINC00557-201ENST00000563184 CUX1P39880 1505 aa0.71□□□□□ -2.3
LINC00557-201ENST00000563184 ARHGEF12Q9NZN5 1544 aa0.71□□□□□ -2.3
LINC00557-201ENST00000563184 CCDC179H3BU77 68 aa0.71□□□□□ -2.3
LINC00557-201ENST00000563184 NPFFO15130 113 aa0.71□□□□□ -2.3
LINC00557-201ENST00000563184 EDF1O60869 148 aaKnown RBP0.71□□□□□ -2.3
LINC00557-201ENST00000563184 LINC00694P0DN24 101 aa0.71□□□□□ -2.3
LINC00557-201ENST00000563184 PYYP10082 97 aa0.71□□□□□ -2.3
LINC00557-201ENST00000563184 RRAS2P62070 204 aaPredicted RBP0.71□□□□□ -2.3
LINC00557-201ENST00000563184 NDUFA11Q86Y39 141 aa0.71□□□□□ -2.3
LINC00557-201ENST00000563184 TSTD1Q8NFU3 115 aa0.71□□□□□ -2.3
LINC00557-201ENST00000563184 OTOSQ8NHW6 89 aa0.71□□□□□ -2.3
LINC00557-201ENST00000563184 PPDPFLQ8WWR9 84 aa0.71□□□□□ -2.3
LINC00557-201ENST00000563184 SPANXDQ9BXN6 97 aa0.71□□□□□ -2.3
LINC00557-201ENST00000563184 FKBP11Q9NYL4 201 aa0.71□□□□□ -2.3
LINC00557-201ENST00000563184 ERG28Q9UKR5 140 aa0.71□□□□□ -2.3
LINC00557-201ENST00000563184 RALGAPBQ86X10 1494 aa0.71□□□□□ -2.3
LINC00557-201ENST00000563184 CHD8Q9HCK8 2581 aa0.71□□□□□ -2.3
LINC00557-201ENST00000563184 NUP210Q8TEM1 1887 aaPredicted RBP0.71□□□□□ -2.3
LINC00557-201ENST00000563184 BLMP54132 1417 aaPredicted RBP0.71□□□□□ -2.3
LINC00557-201ENST00000563184 KIF13AQ9H1H9 1805 aa0.71□□□□□ -2.3
LINC00557-201ENST00000563184 TTC37Q6PGP7 1564 aa0.7□□□□□ -2.3
LINC00557-201ENST00000563184 TANC2Q9HCD6 1990 aa0.7□□□□□ -2.3
LINC00557-201ENST00000563184 ABCC3O15438 1527 aa0.7□□□□□ -2.3
LINC00557-201ENST00000563184 TOP2AP11388 1531 aaKnown RBP0.7□□□□□ -2.3
LINC00557-201ENST00000563184 PIEZO1Q92508 2521 aa0.7□□□□□ -2.3
LINC00557-201ENST00000563184 CFAP43Q8NDM7 1665 aa0.7□□□□□ -2.3
LINC00557-201ENST00000563184 A2ML1A8K2U0 1454 aa0.7□□□□□ -2.3
LINC00557-201ENST00000563184 LRRC9Q6ZRR7 1453 aa0.7□□□□□ -2.3
LINC00557-201ENST00000563184 LOC107984156A0A0G2JMH3 177 aa0.7□□□□□ -2.3
LINC00557-201ENST00000563184 CD3DP04234 171 aa0.7□□□□□ -2.3
LINC00557-201ENST00000563184 CD14P08571 375 aa0.7□□□□□ -2.3
LINC00557-201ENST00000563184 EMX2Q04743 252 aa0.7□□□□□ -2.3
LINC00557-201ENST00000563184 SPATA8Q6RVD6 105 aa0.7□□□□□ -2.3
LINC00557-201ENST00000563184 ZCCHC23Q6ZST2 131 aa0.7□□□□□ -2.3
LINC00557-201ENST00000563184 SLC25A26Q70HW3 274 aa0.7□□□□□ -2.3
LINC00557-201ENST00000563184 ARL17AQ8IVW1 177 aa0.7□□□□□ -2.3
LINC00557-201ENST00000563184 KCNRGQ8N5I3 272 aa0.7□□□□□ -2.3
LINC00557-201ENST00000563184 ARL11Q969Q4 196 aa0.7□□□□□ -2.3
LINC00557-201ENST00000563184 RERGLQ9H628 205 aa0.7□□□□□ -2.3
LINC00557-201ENST00000563184 SPAG17Q6Q759 2223 aa0.7□□□□□ -2.3
LINC00557-201ENST00000563184 MAP3K4Q9Y6R4 1608 aa0.7□□□□□ -2.3
LINC00557-201ENST00000563184 CACNA1AO00555 2505 aa0.7□□□□□ -2.3
LINC00557-201ENST00000563184 ABCA8O94911 1581 aa0.7□□□□□ -2.3
LINC00557-201ENST00000563184 NWD1Q149M9 1564 aa0.7□□□□□ -2.3
LINC00557-201ENST00000563184 PKD1L2Q7Z442 2459 aa0.7□□□□□ -2.3
LINC00557-201ENST00000563184 BCORL1Q5H9F3 1711 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 UNC79Q9P2D8 2635 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 EFCAB5A4FU69 1503 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 ZMYM4Q5VZL5 1548 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 LRRC7Q96NW7 1537 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 FAM135AQ9P2D6 1515 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 ATP10BO94823 1461 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 GOLGA3Q08378 1498 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 NLRP1Q9C000 1473 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 MLH3Q9UHC1 1453 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 NHSL1Q5SYE7 1610 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 ADCY10Q96PN6 1610 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 PIGBOS1A0A0B4J2F0 54 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 A0A0G2JMM0 328 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 TMEM30CPA0ZSE6 113 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 APOC1P02654 83 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 PDE6GP18545 87 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 SNRPD3P62318 126 aaKnown RBP0.69□□□□□ -2.3
LINC00557-201ENST00000563184 NEDD8Q15843 81 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 WHAMMP3Q1A5X7 153 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 CLLU1Q5K131 121 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 DYNLRB2Q8TF09 96 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 PPP1R1CQ8WVI7 109 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 TMEM203Q969S6 136 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 DMAC1Q96GE9 116 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 PSMG3Q9BT73 122 aaPredicted RBP0.69□□□□□ -2.3
LINC00557-201ENST00000563184 LINC00470Q9BZP3 86 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 NOP16Q9Y3C1 178 aaKnown RBP0.69□□□□□ -2.3
LINC00557-201ENST00000563184 NAIPQ13075 1403 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 SCAPERQ9BY12 1400 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 CHD1O14646 1710 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 CEP152O94986 1710 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 CDK13Q14004 1512 aaKnown RBP0.69□□□□□ -2.3
LINC00557-201ENST00000563184 UGGT2Q9NYU1 1516 aa0.69□□□□□ -2.3
LINC00557-201ENST00000563184 PPRC1Q5VV67 1664 aaKnown RBP0.69□□□□□ -2.3
LINC00557-201ENST00000563184 ZNF518AQ6AHZ1 1483 aa0.68□□□□□ -2.3
LINC00557-201ENST00000563184 BCL9LQ86UU0 1499 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms