RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 A0A1B0GW15 77 aa7.05□□□□□ -1.28
LINC00838-201ENST00000562956 K7EQG2 157 aa7.05□□□□□ -1.28
LINC00838-201ENST00000562956 CD28P10747 220 aa7.05□□□□□ -1.28
LINC00838-201ENST00000562956 SCGB2A2Q13296 93 aa7.05□□□□□ -1.28
LINC00838-201ENST00000562956 PSMG4Q5JS54 123 aa7.05□□□□□ -1.28
LINC00838-201ENST00000562956 SAMD13Q5VXD3 122 aa7.05□□□□□ -1.28
LINC00838-201ENST00000562956 SLC25A34Q6PIV7 304 aa7.05□□□□□ -1.28
LINC00838-201ENST00000562956 GATD1Q8NB37 220 aa7.05□□□□□ -1.28
LINC00838-201ENST00000562956 LINC01006Q8NI28 216 aa7.05□□□□□ -1.28
LINC00838-201ENST00000562956 DPF1Q92782 380 aa7.05□□□□□ -1.28
LINC00838-201ENST00000562956 DLX4Q92988 240 aaPredicted RBP7.05□□□□□ -1.28
LINC00838-201ENST00000562956 GAGE10A6NGK3 116 aa7.05□□□□□ -1.28
LINC00838-201ENST00000562956 CIDEAO60543 219 aa7.05□□□□□ -1.28
LINC00838-201ENST00000562956 HILS1P60008 231 aa7.05□□□□□ -1.28
LINC00838-201ENST00000562956 OR9G4Q8NGQ1 327 aa7.05□□□□□ -1.28
LINC00838-201ENST00000562956 ZNF418Q8TF45 676 aaPredicted RBP7.05□□□□□ -1.28
LINC00838-201ENST00000562956 RAB37Q96AX2 223 aa7.05□□□□□ -1.28
LINC00838-201ENST00000562956 TMEM70Q9BUB7 260 aa7.05□□□□□ -1.28
LINC00838-201ENST00000562956 A0A1W2PRX2 142 aa7.04□□□□□ -1.28
LINC00838-201ENST00000562956 ZNF493Q6ZR52 646 aa7.04□□□□□ -1.28
LINC00838-201ENST00000562956 MSRB1Q9NZV6 116 aa7.04□□□□□ -1.28
LINC00838-201ENST00000562956 C7orf71A4D174 169 aa7.04□□□□□ -1.28
LINC00838-201ENST00000562956 CSN3P07498 182 aa7.04□□□□□ -1.28
LINC00838-201ENST00000562956 RNASE4P34096 147 aaKnown RBP7.04□□□□□ -1.28
LINC00838-201ENST00000562956 SNRPD3P62318 126 aaKnown RBP7.04□□□□□ -1.28
LINC00838-201ENST00000562956 TWIST1Q15672 202 aa7.04□□□□□ -1.28
LINC00838-201ENST00000562956 DEFB125Q8N687 156 aa7.04□□□□□ -1.28
LINC00838-201ENST00000562956 WFDC12Q8WWY7 111 aa7.04□□□□□ -1.28
LINC00838-201ENST00000562956 C16orf95Q9H693 158 aa7.04□□□□□ -1.28
LINC00838-201ENST00000562956 RAX2Q96IS3 184 aa7.04□□□□□ -1.28
LINC00838-201ENST00000562956 CNFNQ9BYD5 112 aa7.04□□□□□ -1.28
LINC00838-201ENST00000562956 HSBP1L1C9JCN9 74 aa7.03□□□□□ -1.28
LINC00838-201ENST00000562956 APRG1Q8IVJ8 170 aa7.03□□□□□ -1.28
LINC00838-201ENST00000562956 AMN1Q8IY45 258 aa7.03□□□□□ -1.28
LINC00838-201ENST00000562956 PEMTQ9UBM1 199 aa7.03□□□□□ -1.28
LINC00838-201ENST00000562956 H3BUT2 72 aa7.03□□□□□ -1.28
LINC00838-201ENST00000562956 URB1-AS1Q96HZ7 61 aa7.03□□□□□ -1.28
LINC00838-201ENST00000562956 AP1S3Q96PC3 154 aa7.03□□□□□ -1.28
LINC00838-201ENST00000562956 CITED2Q99967 270 aaPredicted RBP7.03□□□□□ -1.28
LINC00838-201ENST00000562956 CHTOPQ9Y3Y2 248 aaKnown RBP7.03□□□□□ -1.28
LINC00838-201ENST00000562956 TRAV21A0A0B4J279 112 aa7.02□□□□□ -1.29
LINC00838-201ENST00000562956 TRBV7-9A0A0J9YWB2 115 aa7.02□□□□□ -1.29
LINC00838-201ENST00000562956 FAM104BQ5XKR9 115 aa7.02□□□□□ -1.29
LINC00838-201ENST00000562956 A0A0J9YX75 114 aa7.02□□□□□ -1.29
LINC00838-201ENST00000562956 OR10AG1Q8NH19 301 aa7.02□□□□□ -1.29
LINC00838-201ENST00000562956 HIVEP2P31629 2446 aa7.02□□□□□ -1.29
LINC00838-201ENST00000562956 KLLNB2CW77 178 aa7.01□□□□□ -1.29
LINC00838-201ENST00000562956 SYS1-DBNDD2H3BUS1 97 aa7.01□□□□□ -1.29
LINC00838-201ENST00000562956 LEPROTL1O95214 131 aa7.01□□□□□ -1.29
LINC00838-201ENST00000562956 IGKV3-20P01619 116 aa7.01□□□□□ -1.29
LINC00838-201ENST00000562956 RPL24P83731 157 aaKnown RBP7.01□□□□□ -1.29
LINC00838-201ENST00000562956 FHL3Q13643 280 aa7.01□□□□□ -1.29
LINC00838-201ENST00000562956 C12orf54Q6X4T0 127 aa7.01□□□□□ -1.29
LINC00838-201ENST00000562956 TMEM61Q8N0U2 210 aa7.01□□□□□ -1.29
LINC00838-201ENST00000562956 JMJD8Q96S16 334 aa7.01□□□□□ -1.29
LINC00838-201ENST00000562956 GTSF1LQ9H1H1 148 aa7.01□□□□□ -1.29
LINC00838-201ENST00000562956 ANXA2RQ3ZCQ2 193 aa7.01□□□□□ -1.29
LINC00838-201ENST00000562956 IGHV1-24A0A0C4DH33 117 aa7□□□□□ -1.29
LINC00838-201ENST00000562956 INAFM1C9JVW0 142 aa7□□□□□ -1.29
LINC00838-201ENST00000562956 D6R8Y8 96 aa7□□□□□ -1.29
LINC00838-201ENST00000562956 H3BVH4 76 aa7□□□□□ -1.29
LINC00838-201ENST00000562956 CCL24O00175 119 aa7□□□□□ -1.29
LINC00838-201ENST00000562956 SMAGPQ0VAQ4 97 aa7□□□□□ -1.29
LINC00838-201ENST00000562956 MRPL51Q4U2R6 128 aaKnown RBP7□□□□□ -1.29
LINC00838-201ENST00000562956 TMEM191AQ9H0A3 160 aa7□□□□□ -1.29
LINC00838-201ENST00000562956 TSSC4Q9Y5U2 329 aaPredicted RBP7□□□□□ -1.29
LINC00838-201ENST00000562956 SPRY2O43597 315 aa7□□□□□ -1.29
LINC00838-201ENST00000562956 OR5AL1P0C617 328 aa7□□□□□ -1.29
LINC00838-201ENST00000562956 ST20Q9HBF5 79 aa7□□□□□ -1.29
LINC00838-201ENST00000562956 U3KQK5 164 aa7□□□□□ -1.29
LINC00838-201ENST00000562956 GNRH2O43555 120 aa7□□□□□ -1.29
LINC00838-201ENST00000562956 DEFB114Q30KQ6 69 aa7□□□□□ -1.29
LINC00838-201ENST00000562956 DYNLRB2Q8TF09 96 aa7□□□□□ -1.29
LINC00838-201ENST00000562956 RNF185Q96GF1 192 aa7□□□□□ -1.29
LINC00838-201ENST00000562956 TRAV12-2A0A075B6T6 113 aa6.99□□□□□ -1.29
LINC00838-201ENST00000562956 SMKR1H3BMG3 65 aa6.99□□□□□ -1.29
LINC00838-201ENST00000562956 NDUFA7O95182 113 aa6.99□□□□□ -1.29
LINC00838-201ENST00000562956 CD300EQ496F6 205 aaPredicted RBP6.99□□□□□ -1.29
LINC00838-201ENST00000562956 TRAV12-3A0A0B4J271 114 aa6.99□□□□□ -1.29
LINC00838-201ENST00000562956 DEFB131AP59861 70 aa6.99□□□□□ -1.29
LINC00838-201ENST00000562956 FOXI2Q6ZQN5 318 aa6.99□□□□□ -1.29
LINC00838-201ENST00000562956 ORMDL3Q8N138 153 aa6.99□□□□□ -1.29
LINC00838-201ENST00000562956 ODF3Q96PU9 254 aa6.99□□□□□ -1.29
LINC00838-201ENST00000562956 SCRT2Q9NQ03 307 aa6.99□□□□□ -1.29
LINC00838-201ENST00000562956 SETD2Q9BYW2 2564 aaPredicted RBP6.98□□□□□ -1.29
LINC00838-201ENST00000562956 KNCNA6PVL3 124 aa6.98□□□□□ -1.29
LINC00838-201ENST00000562956 G3V4G9 280 aa6.98□□□□□ -1.29
LINC00838-201ENST00000562956 GAS8-AS1O95177 125 aa6.98□□□□□ -1.29
LINC00838-201ENST00000562956 NCR2O95944 276 aa6.98□□□□□ -1.29
LINC00838-201ENST00000562956 EVI2AP22794 236 aa6.98□□□□□ -1.29
LINC00838-201ENST00000562956 LEPP41159 167 aa6.98□□□□□ -1.29
LINC00838-201ENST00000562956 ASIPP42127 132 aa6.98□□□□□ -1.29
LINC00838-201ENST00000562956 PROK1P58294 105 aa6.98□□□□□ -1.29
LINC00838-201ENST00000562956 SPANXN1Q5VSR9 72 aa6.98□□□□□ -1.29
LINC00838-201ENST00000562956 PRELID3AQ96N28 172 aa6.98□□□□□ -1.29
LINC00838-201ENST00000562956 IGHV4-4A0A075B6R2 117 aa6.98□□□□□ -1.29
LINC00838-201ENST00000562956 S100A4P26447 101 aaKnown RBP6.98□□□□□ -1.29
LINC00838-201ENST00000562956 CKS2P33552 79 aa6.98□□□□□ -1.29
LINC00838-201ENST00000562956 FXYD7P58549 80 aa6.98□□□□□ -1.29
LINC00838-201ENST00000562956 SPINK13Q1W4C9 94 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms