RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 DTX2Q86UW9 622 aa10.81□□□□□ -0.68
GTF3C1-203ENST00000562609 OR10J6PQ8NGY7 276 aa10.81□□□□□ -0.68
GTF3C1-203ENST00000562609 TMEM30BQ3MIR4 351 aa10.8□□□□□ -0.68
GTF3C1-203ENST00000562609 Q8TAT8 98 aa10.8□□□□□ -0.68
GTF3C1-203ENST00000562609 SHANK2-AS3Q9BTD1 123 aa10.8□□□□□ -0.68
GTF3C1-203ENST00000562609 MYO18BQ8IUG5 2567 aa10.8□□□□□ -0.68
GTF3C1-203ENST00000562609 SLC25A16P16260 332 aa10.8□□□□□ -0.68
GTF3C1-203ENST00000562609 NTN5Q8WTR8 489 aaPredicted RBP10.8□□□□□ -0.68
GTF3C1-203ENST00000562609 PRR25Q96S07 402 aa10.8□□□□□ -0.68
GTF3C1-203ENST00000562609 KLK15Q9H2R5 256 aa10.8□□□□□ -0.68
GTF3C1-203ENST00000562609 PLGLAQ15195 96 aa10.8□□□□□ -0.68
GTF3C1-203ENST00000562609 ZNF575Q86XF7 245 aa10.8□□□□□ -0.68
GTF3C1-203ENST00000562609 ODF3Q96PU9 254 aa10.8□□□□□ -0.68
GTF3C1-203ENST00000562609 CENPEQ02224 2701 aa10.8□□□□□ -0.68
GTF3C1-203ENST00000562609 VMA21Q3ZAQ7 101 aa10.79□□□□□ -0.68
GTF3C1-203ENST00000562609 TRPT1Q86TN4 253 aaKnown RBP10.79□□□□□ -0.68
GTF3C1-203ENST00000562609 Q8N1Y9 231 aa10.79□□□□□ -0.68
GTF3C1-203ENST00000562609 KLHL30-AS1Q8NEE0 82 aa10.79□□□□□ -0.68
GTF3C1-203ENST00000562609 CELSR2Q9HCU4 2923 aa10.79□□□□□ -0.68
GTF3C1-203ENST00000562609 TRAV26-2A0A0B4J265 109 aa10.79□□□□□ -0.68
GTF3C1-203ENST00000562609 MDFICQ9P1T7 246 aa10.79□□□□□ -0.68
GTF3C1-203ENST00000562609 CFC1BP0CG36 223 aa10.78□□□□□ -0.68
GTF3C1-203ENST00000562609 CFC1P0CG37 223 aa10.78□□□□□ -0.68
GTF3C1-203ENST00000562609 TMEM126AQ9H061 195 aa10.78□□□□□ -0.68
GTF3C1-203ENST00000562609 TRAV12-1A0A0B4J245 112 aa10.78□□□□□ -0.68
GTF3C1-203ENST00000562609 MRGPRG-AS1Q2M3A8 158 aa10.78□□□□□ -0.68
GTF3C1-203ENST00000562609 PVRIGQ6DKI7 326 aa10.78□□□□□ -0.68
GTF3C1-203ENST00000562609 C10orf126Q8N4M7 172 aa10.78□□□□□ -0.68
GTF3C1-203ENST00000562609 CHCHD5Q9BSY4 110 aa10.78□□□□□ -0.68
GTF3C1-203ENST00000562609 USP9XQ93008 2570 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-203ENST00000562609 TRAV8-4A0A0B4J246 113 aa10.77□□□□□ -0.68
GTF3C1-203ENST00000562609 H3BRN7 92 aa10.77□□□□□ -0.68
GTF3C1-203ENST00000562609 IGKV1-17P01599 117 aa10.77□□□□□ -0.68
GTF3C1-203ENST00000562609 RPL27AP46776 148 aaKnown RBP10.77□□□□□ -0.68
GTF3C1-203ENST00000562609 LINC00311Q8N616 119 aa10.77□□□□□ -0.68
GTF3C1-203ENST00000562609 CSDC2Q9Y534 153 aaKnown RBP10.77□□□□□ -0.68
GTF3C1-203ENST00000562609 TMEM190Q8WZ59 177 aa10.77□□□□□ -0.69
GTF3C1-203ENST00000562609 CNFNQ9BYD5 112 aa10.77□□□□□ -0.69
GTF3C1-203ENST00000562609 IGLV1-47P01700 117 aa10.76□□□□□ -0.69
GTF3C1-203ENST00000562609 BUB1B-PAK6H3BSN5 160 aa10.76□□□□□ -0.69
GTF3C1-203ENST00000562609 TRGV3P03979 118 aa10.76□□□□□ -0.69
GTF3C1-203ENST00000562609 IGHV1-3A0A0C4DH29 117 aa10.76□□□□□ -0.69
GTF3C1-203ENST00000562609 TEX49A0A1B0GTD5 131 aa10.76□□□□□ -0.69
GTF3C1-203ENST00000562609 MRPS12O15235 138 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-203ENST00000562609 IGHG4P01861 327 aa10.76□□□□□ -0.69
GTF3C1-203ENST00000562609 NRGNQ92686 78 aa10.76□□□□□ -0.69
GTF3C1-203ENST00000562609 SCGB3A1Q96QR1 104 aa10.76□□□□□ -0.69
GTF3C1-203ENST00000562609 PRO1854Q9UHT4 67 aa10.76□□□□□ -0.69
GTF3C1-203ENST00000562609 GNLYP22749 145 aa10.75□□□□□ -0.69
GTF3C1-203ENST00000562609 NRACQ8N912 160 aa10.75□□□□□ -0.69
GTF3C1-203ENST00000562609 LINC01587Q99440 93 aa10.75□□□□□ -0.69
GTF3C1-203ENST00000562609 TRAV2A0A0B4J234 112 aa10.75□□□□□ -0.69
GTF3C1-203ENST00000562609 COX6B1P14854 86 aa10.75□□□□□ -0.69
GTF3C1-203ENST00000562609 C21orf62Q9NYP8 219 aa10.75□□□□□ -0.69
GTF3C1-203ENST00000562609 C19orf84I3L1E1 186 aa10.74□□□□□ -0.69
GTF3C1-203ENST00000562609 A0A0J9YY99 117 aa10.74□□□□□ -0.69
GTF3C1-203ENST00000562609 C5orf47Q569G3 176 aa10.74□□□□□ -0.69
GTF3C1-203ENST00000562609 COX8CQ7Z4L0 72 aa10.74□□□□□ -0.69
GTF3C1-203ENST00000562609 NEXN-AS1Q8NBZ9 246 aa10.74□□□□□ -0.69
GTF3C1-203ENST00000562609 PRORYQ9H606 182 aa10.74□□□□□ -0.69
GTF3C1-203ENST00000562609 UBTD1Q9HAC8 227 aa10.74□□□□□ -0.69
GTF3C1-203ENST00000562609 H7C2G1 150 aa10.73□□□□□ -0.69
GTF3C1-203ENST00000562609 LINC00694P0DN24 101 aa10.73□□□□□ -0.69
GTF3C1-203ENST00000562609 C11orf71Q6IPW1 123 aa10.73□□□□□ -0.69
GTF3C1-203ENST00000562609 C8orf31Q8N9H6 132 aa10.73□□□□□ -0.69
GTF3C1-203ENST00000562609 RNF125Q96EQ8 232 aa10.73□□□□□ -0.69
GTF3C1-203ENST00000562609 HLA-DMBP28068 263 aa10.73□□□□□ -0.69
GTF3C1-203ENST00000562609 IGFL4Q6B9Z1 124 aa10.73□□□□□ -0.69
GTF3C1-203ENST00000562609 Q6ZS46 218 aa10.73□□□□□ -0.69
GTF3C1-203ENST00000562609 ZNF491Q8N8L2 437 aa10.73□□□□□ -0.69
GTF3C1-203ENST00000562609 I3L2K1 104 aa10.72□□□□□ -0.69
GTF3C1-203ENST00000562609 TIMD4Q96H15 378 aa10.72□□□□□ -0.69
GTF3C1-203ENST00000562609 TIMM23O14925 209 aa10.72□□□□□ -0.69
GTF3C1-203ENST00000562609 IGHV3-30P01768 117 aa10.72□□□□□ -0.69
GTF3C1-203ENST00000562609 IGHV3-30-5P0DP03 117 aa10.72□□□□□ -0.69
GTF3C1-203ENST00000562609 PDE6HQ13956 83 aa10.72□□□□□ -0.69
GTF3C1-203ENST00000562609 FAM208BQ5VWN6 2430 aa10.72□□□□□ -0.69
GTF3C1-203ENST00000562609 LOC107984640A0A0U1RRK4 108 aa10.71□□□□□ -0.69
GTF3C1-203ENST00000562609 RPL7P18124 248 aaKnown RBP10.71□□□□□ -0.69
GTF3C1-203ENST00000562609 SIGLEC9Q9Y336 463 aa10.71□□□□□ -0.69
GTF3C1-203ENST00000562609 PSMG3-AS1Q96PY0 264 aa10.71□□□□□ -0.69
GTF3C1-203ENST00000562609 BAALCQ8WXS3 180 aa10.71□□□□□ -0.7
GTF3C1-203ENST00000562609 DNAJC30Q96LL9 226 aa10.71□□□□□ -0.7
GTF3C1-203ENST00000562609 ZNF56Q15929 161 aa10.7□□□□□ -0.7
GTF3C1-203ENST00000562609 TEX22C9J3V5 150 aa10.7□□□□□ -0.7
GTF3C1-203ENST00000562609 DUSP14O95147 198 aaKnown RBP10.7□□□□□ -0.7
GTF3C1-203ENST00000562609 IGHV4-39P01824 125 aa10.7□□□□□ -0.7
GTF3C1-203ENST00000562609 ZFP36P26651 326 aaKnown RBP10.7□□□□□ -0.7
GTF3C1-203ENST00000562609 ITLN2Q8WWU7 325 aaPredicted RBP10.7□□□□□ -0.7
GTF3C1-203ENST00000562609 SPXQ9BT56 116 aa10.7□□□□□ -0.7
GTF3C1-203ENST00000562609 S4R3C0 116 aa10.7□□□□□ -0.7
GTF3C1-203ENST00000562609 POLQO75417 2590 aa10.69□□□□□ -0.7
GTF3C1-203ENST00000562609 ELANEP08246 267 aa10.69□□□□□ -0.7
GTF3C1-203ENST00000562609 HES1Q14469 280 aa10.69□□□□□ -0.7
GTF3C1-203ENST00000562609 LINC01620Q4KN68 170 aa10.69□□□□□ -0.7
GTF3C1-203ENST00000562609 TOMM6Q96B49 74 aa10.69□□□□□ -0.7
GTF3C1-203ENST00000562609 SMIM2Q9BVW6 85 aa10.69□□□□□ -0.7
GTF3C1-203ENST00000562609 H3BMM0 161 aa10.69□□□□□ -0.7
GTF3C1-203ENST00000562609 LGALS9O00182 355 aa10.69□□□□□ -0.7
GTF3C1-203ENST00000562609 RPL13AP40429 203 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms