RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 MAP1LC3B2A6NCE7 125 aa-0.4□□□□□ -2.47
USP8-218ENST00000561330 M0QZK8 103 aa-0.4□□□□□ -2.47
USP8-218ENST00000561330 COX4I1P13073 169 aa-0.4□□□□□ -2.47
USP8-218ENST00000561330 SRP9P49458 86 aaKnown RBP-0.4□□□□□ -2.47
USP8-218ENST00000561330 PCBD1P61457 104 aa-0.4□□□□□ -2.47
USP8-218ENST00000561330 EMX2Q04743 252 aa-0.4□□□□□ -2.47
USP8-218ENST00000561330 DCUN1D2Q6PH85 259 aa-0.4□□□□□ -2.47
USP8-218ENST00000561330 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.4□□□□□ -2.47
USP8-218ENST00000561330 MORN4Q8NDC4 146 aa-0.4□□□□□ -2.47
USP8-218ENST00000561330 BRK1Q8WUW1 75 aa-0.4□□□□□ -2.47
USP8-218ENST00000561330 UFC1Q9Y3C8 167 aa-0.4□□□□□ -2.47
USP8-218ENST00000561330 APC2O95996 2303 aa-0.4□□□□□ -2.47
USP8-218ENST00000561330 FAM135BQ49AJ0 1406 aa-0.4□□□□□ -2.47
USP8-218ENST00000561330 TCRBV3S1A0A5B6 114 aa-0.41□□□□□ -2.48
USP8-218ENST00000561330 RBAKDNA6NC62 111 aa-0.41□□□□□ -2.48
USP8-218ENST00000561330 PFDN1O60925 122 aa-0.41□□□□□ -2.48
USP8-218ENST00000561330 OR2H2O95918 312 aa-0.41□□□□□ -2.48
USP8-218ENST00000561330 HBDP02042 147 aa-0.41□□□□□ -2.48
USP8-218ENST00000561330 SERPINB1P30740 379 aa-0.41□□□□□ -2.48
USP8-218ENST00000561330 C3orf33Q6P1S2 294 aa-0.41□□□□□ -2.48
USP8-218ENST00000561330 HRCT1Q6UXD1 115 aa-0.41□□□□□ -2.48
USP8-218ENST00000561330 STX12Q86Y82 276 aa-0.41□□□□□ -2.48
USP8-218ENST00000561330 VPS25Q9BRG1 176 aa-0.41□□□□□ -2.48
USP8-218ENST00000561330 CCDC32Q9BV29 185 aa-0.41□□□□□ -2.48
USP8-218ENST00000561330 TRAPPC2LQ9UL33 140 aa-0.41□□□□□ -2.48
USP8-218ENST00000561330 ARFGEF1Q9Y6D6 1849 aa-0.41□□□□□ -2.48
USP8-218ENST00000561330 SRRM2Q9UQ35 2752 aaKnown RBP-0.41□□□□□ -2.48
USP8-218ENST00000561330 MYO7BQ6PIF6 2116 aa-0.41□□□□□ -2.48
USP8-218ENST00000561330 ALMS1Q8TCU4 4167 aa-0.42□□□□□ -2.48
USP8-218ENST00000561330 BSNQ9UPA5 3926 aa-0.42□□□□□ -2.48
USP8-218ENST00000561330 DEFB109BQ30KR1 87 aa-0.42□□□□□ -2.48
USP8-218ENST00000561330 CYP2G1PQ6ZSU1 146 aa-0.42□□□□□ -2.48
USP8-218ENST00000561330 OR4S1Q8NGB4 309 aa-0.42□□□□□ -2.48
USP8-218ENST00000561330 TMEM242Q9NWH2 141 aa-0.42□□□□□ -2.48
USP8-218ENST00000561330 NEBP20929 6669 aa-0.42□□□□□ -2.48
USP8-218ENST00000561330 YTHDC2Q9H6S0 1430 aaKnown RBP-0.42□□□□□ -2.48
USP8-218ENST00000561330 TNXBP22105 4242 aa-0.42□□□□□ -2.48
USP8-218ENST00000561330 CASZ1Q86V15 1759 aa-0.42□□□□□ -2.48
USP8-218ENST00000561330 USF3Q68DE3 2245 aa-0.42□□□□□ -2.48
USP8-218ENST00000561330 PHIPQ8WWQ0 1821 aa-0.43□□□□□ -2.48
USP8-218ENST00000561330 PIEZO2Q9H5I5 2752 aa-0.43□□□□□ -2.48
USP8-218ENST00000561330 SSC5DA1L4H1 1573 aa-0.43□□□□□ -2.48
USP8-218ENST00000561330 TRBV7-1A0A0A6YYK4 115 aa-0.43□□□□□ -2.48
USP8-218ENST00000561330 LOC107984640A0A0U1RRK4 108 aa-0.43□□□□□ -2.48
USP8-218ENST00000561330 PNMA8CA0A1B0GUJ8 204 aa-0.43□□□□□ -2.48
USP8-218ENST00000561330 M0R3E3 92 aa-0.43□□□□□ -2.48
USP8-218ENST00000561330 ACYP2P14621 99 aa-0.43□□□□□ -2.48
USP8-218ENST00000561330 GCHFRP30047 84 aa-0.43□□□□□ -2.48
USP8-218ENST00000561330 UBE2DNLQ8IWF7 75 aa-0.43□□□□□ -2.48
USP8-218ENST00000561330 C4orf33Q8N1A6 199 aa-0.43□□□□□ -2.48
USP8-218ENST00000561330 PPDPFLQ8WWR9 84 aa-0.43□□□□□ -2.48
USP8-218ENST00000561330 HOPXQ9BPY8 73 aaPredicted RBP-0.43□□□□□ -2.48
USP8-218ENST00000561330 CBLN4Q9NTU7 201 aa-0.43□□□□□ -2.48
USP8-218ENST00000561330 GID8Q9NWU2 228 aa-0.43□□□□□ -2.48
USP8-218ENST00000561330 PRO0255Q9UI72 69 aa-0.43□□□□□ -2.48
USP8-218ENST00000561330 MED31Q9Y3C7 131 aa-0.43□□□□□ -2.48
USP8-218ENST00000561330 MYH13Q9UKX3 1938 aa-0.43□□□□□ -2.48
USP8-218ENST00000561330 NHSL1Q5SYE7 1610 aa-0.43□□□□□ -2.48
USP8-218ENST00000561330 A2MP01023 1474 aa-0.43□□□□□ -2.48
USP8-218ENST00000561330 PTPRGP23470 1445 aa-0.44□□□□□ -2.48
USP8-218ENST00000561330 ZNF815PA8K554 130 aa-0.44□□□□□ -2.48
USP8-218ENST00000561330 PGRMC1O00264 195 aaKnown RBP-0.44□□□□□ -2.48
USP8-218ENST00000561330 FAM107AO95990 144 aa-0.44□□□□□ -2.48
USP8-218ENST00000561330 SLC25A5P05141 298 aaKnown RBP-0.44□□□□□ -2.48
USP8-218ENST00000561330 SPRR2DP22532 72 aa-0.44□□□□□ -2.48
USP8-218ENST00000561330 AKR1D1P51857 326 aa-0.44□□□□□ -2.48
USP8-218ENST00000561330 PSPHP78330 225 aa-0.44□□□□□ -2.48
USP8-218ENST00000561330 FAM74A4Q5TZK3 123 aa-0.44□□□□□ -2.48
USP8-218ENST00000561330 TRIQKQ629K1 86 aa-0.44□□□□□ -2.48
USP8-218ENST00000561330 SLC48A1Q6P1K1 146 aa-0.44□□□□□ -2.48
USP8-218ENST00000561330 Q6ZRX8 168 aa-0.44□□□□□ -2.48
USP8-218ENST00000561330 SLC25A26Q70HW3 274 aa-0.44□□□□□ -2.48
USP8-218ENST00000561330 SSBP3-AS1Q7Z2R9 100 aa-0.44□□□□□ -2.48
USP8-218ENST00000561330 ZNF142P52746 1687 aaPredicted RBP-0.44□□□□□ -2.48
USP8-218ENST00000561330 FAT2Q9NYQ8 4349 aa-0.44□□□□□ -2.48
USP8-218ENST00000561330 VWFP04275 2813 aa-0.44□□□□□ -2.48
USP8-218ENST00000561330 SYNMO15061 1565 aa-0.45□□□□□ -2.48
USP8-218ENST00000561330 A0A0D9SFI3 127 aa-0.45□□□□□ -2.48
USP8-218ENST00000561330 TRBV7-6A0A0J9YX20 115 aa-0.45□□□□□ -2.48
USP8-218ENST00000561330 CXorf51AA0A1B0GTR3 108 aa-0.45□□□□□ -2.48
USP8-218ENST00000561330 UQCRQO14949 82 aa-0.45□□□□□ -2.48
USP8-218ENST00000561330 HIST1H1BP16401 226 aaKnown RBP-0.45□□□□□ -2.48
USP8-218ENST00000561330 PLGLB1Q02325 96 aa-0.45□□□□□ -2.48
USP8-218ENST00000561330 SPAG11BQ08648 103 aa-0.45□□□□□ -2.48
USP8-218ENST00000561330 WFDC2Q14508 124 aa-0.45□□□□□ -2.48
USP8-218ENST00000561330 KRTAP19-7Q3SYF9 63 aa-0.45□□□□□ -2.48
USP8-218ENST00000561330 CYP4F30PQ9H0H9 118 aa-0.45□□□□□ -2.48
USP8-218ENST00000561330 SLC35B3Q9H1N7 401 aa-0.45□□□□□ -2.48
USP8-218ENST00000561330 TAS2R8Q9NYW2 309 aa-0.45□□□□□ -2.48
USP8-218ENST00000561330 V9GYV3 84 aa-0.45□□□□□ -2.48
USP8-218ENST00000561330 MYH8P13535 1937 aa-0.45□□□□□ -2.48
USP8-218ENST00000561330 XIRP1Q702N8 1843 aaKnown RBP-0.45□□□□□ -2.48
USP8-218ENST00000561330 BIVM-ERCC5R4GMW8 1640 aa-0.46□□□□□ -2.48
USP8-218ENST00000561330 NRXN2Q9P2S2 1712 aa-0.46□□□□□ -2.48
USP8-218ENST00000561330 CHD6Q8TD26 2715 aa-0.46□□□□□ -2.48
USP8-218ENST00000561330 A0A1B0GW64 132 aa-0.46□□□□□ -2.48
USP8-218ENST00000561330 TMEM14DPA8MWL7 114 aa-0.46□□□□□ -2.48
USP8-218ENST00000561330 E7EQ34 232 aa-0.46□□□□□ -2.48
USP8-218ENST00000561330 TCRAP04437 139 aa-0.46□□□□□ -2.48
USP8-218ENST00000561330 RPL22P35268 128 aaKnown RBP-0.46□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms