RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 PTH2Q96A98 100 aa8.43□□□□□ -1.06
CDC42BPB-202ENST00000558321 ZFP30Q9Y2G7 519 aa8.43□□□□□ -1.06
CDC42BPB-202ENST00000558321 PKD1P98161 4303 aa8.42□□□□□ -1.06
CDC42BPB-202ENST00000558321 HERC2O95714 4834 aa8.42□□□□□ -1.06
CDC42BPB-202ENST00000558321 IGKV3D-20A0A0C4DH25 116 aa8.42□□□□□ -1.06
CDC42BPB-202ENST00000558321 A0A0D9SG52 128 aa8.42□□□□□ -1.06
CDC42BPB-202ENST00000558321 TRBV6-4A0A1B0GX49 114 aa8.42□□□□□ -1.06
CDC42BPB-202ENST00000558321 KANTRA0A1W2PQU2 76 aa8.42□□□□□ -1.06
CDC42BPB-202ENST00000558321 SEC11BP0C7V7 166 aa8.42□□□□□ -1.06
CDC42BPB-202ENST00000558321 FHITP49789 147 aa8.42□□□□□ -1.06
CDC42BPB-202ENST00000558321 ZNF345Q14585 488 aa8.42□□□□□ -1.06
CDC42BPB-202ENST00000558321 RHOHQ15669 191 aa8.42□□□□□ -1.06
CDC42BPB-202ENST00000558321 FAM213BQ8TBF2 198 aa8.42□□□□□ -1.06
CDC42BPB-202ENST00000558321 SFT2D1Q8WV19 159 aa8.42□□□□□ -1.06
CDC42BPB-202ENST00000558321 FMC1Q96HJ9 113 aa8.42□□□□□ -1.06
CDC42BPB-202ENST00000558321 ZNF471Q9BX82 626 aaPredicted RBP8.42□□□□□ -1.06
CDC42BPB-202ENST00000558321 KIAA1109Q2LD37 5005 aa8.42□□□□□ -1.06
CDC42BPB-202ENST00000558321 TRAV8-6A0A0B4J262 113 aa8.41□□□□□ -1.06
CDC42BPB-202ENST00000558321 A0A1B0GV50 99 aa8.41□□□□□ -1.06
CDC42BPB-202ENST00000558321 HMSDA8MTL9 139 aa8.41□□□□□ -1.06
CDC42BPB-202ENST00000558321 UMAD1C9J7I0 102 aa8.41□□□□□ -1.06
CDC42BPB-202ENST00000558321 K7EP13 123 aa8.41□□□□□ -1.06
CDC42BPB-202ENST00000558321 M0R036 132 aa8.41□□□□□ -1.06
CDC42BPB-202ENST00000558321 PAGE4O60829 102 aa8.41□□□□□ -1.06
CDC42BPB-202ENST00000558321 CRYGDP07320 174 aa8.41□□□□□ -1.06
CDC42BPB-202ENST00000558321 MGST1P10620 155 aaKnown RBP8.41□□□□□ -1.06
CDC42BPB-202ENST00000558321 FAM162BQ5T6X4 162 aa8.41□□□□□ -1.06
CDC42BPB-202ENST00000558321 Q6ZRN7 208 aaPredicted RBP8.41□□□□□ -1.06
CDC42BPB-202ENST00000558321 OR11H4Q8NGC9 324 aa8.41□□□□□ -1.06
CDC42BPB-202ENST00000558321 ZC2HC1AQ96GY0 325 aa8.41□□□□□ -1.06
CDC42BPB-202ENST00000558321 MSRB1Q9NZV6 116 aa8.41□□□□□ -1.06
CDC42BPB-202ENST00000558321 IGHV3-38A0A0C4DH36 116 aa8.4□□□□□ -1.06
CDC42BPB-202ENST00000558321 GRIFINA4D1Z8 144 aa8.4□□□□□ -1.06
CDC42BPB-202ENST00000558321 A8MWV9 139 aa8.4□□□□□ -1.06
CDC42BPB-202ENST00000558321 SH2D1AO60880 128 aa8.4□□□□□ -1.06
CDC42BPB-202ENST00000558321 PFDN1O60925 122 aa8.4□□□□□ -1.06
CDC42BPB-202ENST00000558321 DNAH10OSP0CZ25 163 aa8.4□□□□□ -1.06
CDC42BPB-202ENST00000558321 AKR1C3P42330 323 aa8.4□□□□□ -1.06
CDC42BPB-202ENST00000558321 TIRAPP58753 221 aa8.4□□□□□ -1.06
CDC42BPB-202ENST00000558321 KRTAP10-2P60368 255 aa8.4□□□□□ -1.06
CDC42BPB-202ENST00000558321 ERVFC1-1P60608 527 aa8.4□□□□□ -1.06
CDC42BPB-202ENST00000558321 EIF5AP63241 154 aaKnown RBP8.4□□□□□ -1.06
CDC42BPB-202ENST00000558321 OR10J3Q5JRS4 329 aa8.4□□□□□ -1.06
CDC42BPB-202ENST00000558321 C10orf126Q8N4M7 172 aa8.4□□□□□ -1.06
CDC42BPB-202ENST00000558321 SYT8Q8NBV8 401 aa8.4□□□□□ -1.06
CDC42BPB-202ENST00000558321 TCEAL7Q9BRU2 100 aa8.4□□□□□ -1.06
CDC42BPB-202ENST00000558321 KRBOX1C9JBD0 128 aa8.39□□□□□ -1.07
CDC42BPB-202ENST00000558321 H3BVH4 76 aa8.39□□□□□ -1.07
CDC42BPB-202ENST00000558321 BCL2L11O43521 198 aa8.39□□□□□ -1.07
CDC42BPB-202ENST00000558321 CDK2AP2O75956 126 aa8.39□□□□□ -1.07
CDC42BPB-202ENST00000558321 ARMS2P0C7Q2 107 aa8.39□□□□□ -1.07
CDC42BPB-202ENST00000558321 CRIP1P50238 77 aa8.39□□□□□ -1.07
CDC42BPB-202ENST00000558321 PIK3CD-AS1Q5SR53 167 aa8.39□□□□□ -1.07
CDC42BPB-202ENST00000558321 ATP6V0E2Q8NHE4 81 aa8.39□□□□□ -1.07
CDC42BPB-202ENST00000558321 MBD3L1Q8WWY6 194 aa8.39□□□□□ -1.07
CDC42BPB-202ENST00000558321 PARLQ9H300 379 aa8.39□□□□□ -1.07
CDC42BPB-202ENST00000558321 PGPEP1Q9NXJ5 209 aa8.39□□□□□ -1.07
CDC42BPB-202ENST00000558321 IL36BQ9NZH7 164 aa8.39□□□□□ -1.07
CDC42BPB-202ENST00000558321 PKHD1P08F94 4074 aa8.39□□□□□ -1.07
CDC42BPB-202ENST00000558321 TMSB15BA0A087X1C1 80 aa8.38□□□□□ -1.07
CDC42BPB-202ENST00000558321 TRBV6-1A0A0K0K1D8 114 aa8.38□□□□□ -1.07
CDC42BPB-202ENST00000558321 S100A9P06702 114 aaKnown RBP8.38□□□□□ -1.07
CDC42BPB-202ENST00000558321 H2AFB1P0C5Y9 115 aa8.38□□□□□ -1.07
CDC42BPB-202ENST00000558321 ZFP2Q6ZN57 461 aa8.38□□□□□ -1.07
CDC42BPB-202ENST00000558321 Q6ZSN1 163 aa8.38□□□□□ -1.07
CDC42BPB-202ENST00000558321 COX8CQ7Z4L0 72 aa8.38□□□□□ -1.07
CDC42BPB-202ENST00000558321 GTSF1LQ9H1H1 148 aa8.38□□□□□ -1.07
CDC42BPB-202ENST00000558321 PHLDA3Q9Y5J5 127 aa8.38□□□□□ -1.07
CDC42BPB-202ENST00000558321 GAGE12JA6NER3 117 aa8.37□□□□□ -1.07
CDC42BPB-202ENST00000558321 LTAP01374 205 aa8.37□□□□□ -1.07
CDC42BPB-202ENST00000558321 TPT1P13693 172 aaKnown RBP8.37□□□□□ -1.07
CDC42BPB-202ENST00000558321 GAGE1Q13065 139 aa8.37□□□□□ -1.07
CDC42BPB-202ENST00000558321 GAGE4Q13068 117 aa8.37□□□□□ -1.07
CDC42BPB-202ENST00000558321 GAGE5Q13069 117 aa8.37□□□□□ -1.07
CDC42BPB-202ENST00000558321 ZNF674Q2M3X9 581 aa8.37□□□□□ -1.07
CDC42BPB-202ENST00000558321 GAGE13Q4V321 117 aa8.37□□□□□ -1.07
CDC42BPB-202ENST00000558321 LELP1Q5T871 98 aa8.37□□□□□ -1.07
CDC42BPB-202ENST00000558321 TMUB2Q71RG4 321 aa8.37□□□□□ -1.07
CDC42BPB-202ENST00000558321 JPT2Q9H910 190 aa8.37□□□□□ -1.07
CDC42BPB-202ENST00000558321 M0R381 172 aa8.36□□□□□ -1.07
CDC42BPB-202ENST00000558321 PSCAO43653 123 aa8.36□□□□□ -1.07
CDC42BPB-202ENST00000558321 IGHV3-30P01768 117 aa8.36□□□□□ -1.07
CDC42BPB-202ENST00000558321 IGHV3-33P01772 117 aa8.36□□□□□ -1.07
CDC42BPB-202ENST00000558321 IGHV3-30-3P0DP02 117 aa8.36□□□□□ -1.07
CDC42BPB-202ENST00000558321 IGHV3-30-5P0DP03 117 aa8.36□□□□□ -1.07
CDC42BPB-202ENST00000558321 LINC01556Q5JQF7 62 aa8.36□□□□□ -1.07
CDC42BPB-202ENST00000558321 DNLZQ5SXM8 178 aa8.36□□□□□ -1.07
CDC42BPB-202ENST00000558321 MAPKAPK5-AS1Q8N8E1 139 aa8.36□□□□□ -1.07
CDC42BPB-202ENST00000558321 SAMD10Q9BYL1 202 aa8.36□□□□□ -1.07
CDC42BPB-202ENST00000558321 DNAH11Q96DT5 4516 aa8.35□□□□□ -1.07
CDC42BPB-202ENST00000558321 A0A087WTM6 91 aa8.35□□□□□ -1.07
CDC42BPB-202ENST00000558321 SCO2A0A1W2PP80 73 aa8.35□□□□□ -1.07
CDC42BPB-202ENST00000558321 RHODO00212 210 aa8.35□□□□□ -1.07
CDC42BPB-202ENST00000558321 FUSP35637 526 aaKnown RBP eCLIP8.35□□□□□ -1.07
CDC42BPB-202ENST00000558321 LINC01559Q495D7 138 aa8.35□□□□□ -1.07
CDC42BPB-202ENST00000558321 FAM74A4Q5TZK3 123 aa8.35□□□□□ -1.07
CDC42BPB-202ENST00000558321 BAGE2Q86Y30 109 aa8.35□□□□□ -1.07
CDC42BPB-202ENST00000558321 C14orf178Q8N769 122 aaPredicted RBP8.35□□□□□ -1.07
CDC42BPB-202ENST00000558321 A0A087WWL8 130 aa8.34□□□□□ -1.07
CDC42BPB-202ENST00000558321 IBA57-AS1B1ANH7 110 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms