RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 APLNQ9ULZ1 77 aa9.64□□□□□ -0.87
SHMT2-234ENST00000557703 PHLDA3Q9Y5J5 127 aa9.64□□□□□ -0.87
SHMT2-234ENST00000557703 A0A1W2PPQ1 181 aa9.63□□□□□ -0.87
SHMT2-234ENST00000557703 ZNF727A8MUV8 499 aa9.63□□□□□ -0.87
SHMT2-234ENST00000557703 F2Z2F3 143 aa9.63□□□□□ -0.87
SHMT2-234ENST00000557703 M0R036 132 aa9.63□□□□□ -0.87
SHMT2-234ENST00000557703 ARMS2P0C7Q2 107 aa9.63□□□□□ -0.87
SHMT2-234ENST00000557703 P0DMU3 169 aa9.63□□□□□ -0.87
SHMT2-234ENST00000557703 FAM231AP0DMU4 169 aa9.63□□□□□ -0.87
SHMT2-234ENST00000557703 FAM231CP0DMU5 169 aa9.63□□□□□ -0.87
SHMT2-234ENST00000557703 ZFP2Q6ZN57 461 aa9.63□□□□□ -0.87
SHMT2-234ENST00000557703 FAM231DQ6ZW35 169 aa9.63□□□□□ -0.87
SHMT2-234ENST00000557703 ZFP82Q8N141 532 aa9.63□□□□□ -0.87
SHMT2-234ENST00000557703 OR4C5Q8NGB2 326 aa9.63□□□□□ -0.87
SHMT2-234ENST00000557703 OCC1Q8TAD7 63 aa9.63□□□□□ -0.87
SHMT2-234ENST00000557703 MRPL16Q9NX20 251 aaKnown RBP9.63□□□□□ -0.87
SHMT2-234ENST00000557703 LCE6AA0A183 80 aa9.62□□□□□ -0.87
SHMT2-234ENST00000557703 SNAI2O43623 268 aa9.62□□□□□ -0.87
SHMT2-234ENST00000557703 FAM3BP58499 235 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-234ENST00000557703 TMEM88Q6PEY1 159 aa9.62□□□□□ -0.87
SHMT2-234ENST00000557703 ZNF575Q86XF7 245 aa9.62□□□□□ -0.87
SHMT2-234ENST00000557703 STARD9Q9P2P6 4700 aa9.61□□□□□ -0.87
SHMT2-234ENST00000557703 DYNC2H1Q8NCM8 4307 aaKnown RBP9.61□□□□□ -0.87
SHMT2-234ENST00000557703 RHODO00212 210 aa9.61□□□□□ -0.87
SHMT2-234ENST00000557703 RS1O15537 224 aa9.61□□□□□ -0.87
SHMT2-234ENST00000557703 TMEM241Q24JQ0 296 aa9.61□□□□□ -0.87
SHMT2-234ENST00000557703 RNF212Q495C1 297 aa9.61□□□□□ -0.87
SHMT2-234ENST00000557703 CT83Q5H943 113 aa9.61□□□□□ -0.87
SHMT2-234ENST00000557703 SOHLH1Q5JUK2 328 aa9.61□□□□□ -0.87
SHMT2-234ENST00000557703 WDR73Q6P4I2 378 aa9.61□□□□□ -0.87
SHMT2-234ENST00000557703 OR2D3Q8NGH3 330 aa9.61□□□□□ -0.87
SHMT2-234ENST00000557703 HHLA3Q9XRX5 114 aa9.61□□□□□ -0.87
SHMT2-234ENST00000557703 TRGV4A0A0C4DH28 118 aa9.6□□□□□ -0.87
SHMT2-234ENST00000557703 PGPEP1LA6NFU8 196 aa9.6□□□□□ -0.87
SHMT2-234ENST00000557703 H3BVH4 76 aa9.6□□□□□ -0.87
SHMT2-234ENST00000557703 HOXA5P20719 270 aa9.6□□□□□ -0.87
SHMT2-234ENST00000557703 CEBPGP53567 150 aa9.6□□□□□ -0.87
SHMT2-234ENST00000557703 IFITM2Q01629 132 aa9.6□□□□□ -0.87
SHMT2-234ENST00000557703 FHL2Q14192 279 aa9.6□□□□□ -0.87
SHMT2-234ENST00000557703 CFAP126Q5VTH2 177 aa9.6□□□□□ -0.87
SHMT2-234ENST00000557703 UQCC3Q6UW78 93 aa9.6□□□□□ -0.87
SHMT2-234ENST00000557703 SH2D6Q7Z4S9 175 aa9.6□□□□□ -0.87
SHMT2-234ENST00000557703 LINC01551Q86U37 167 aa9.6□□□□□ -0.87
SHMT2-234ENST00000557703 NUDT10Q8NFP7 164 aa9.6□□□□□ -0.87
SHMT2-234ENST00000557703 NUDT11Q96G61 164 aa9.6□□□□□ -0.87
SHMT2-234ENST00000557703 TRAV26-1A0A087WT03 109 aa9.59□□□□□ -0.87
SHMT2-234ENST00000557703 TRBV6-4A0A1B0GX49 114 aa9.59□□□□□ -0.87
SHMT2-234ENST00000557703 GRIFINA4D1Z8 144 aa9.59□□□□□ -0.87
SHMT2-234ENST00000557703 FAM231BA6NCW3 169 aa9.59□□□□□ -0.87
SHMT2-234ENST00000557703 A8MWL6 223 aa9.59□□□□□ -0.87
SHMT2-234ENST00000557703 PAX4O43316 350 aa9.59□□□□□ -0.87
SHMT2-234ENST00000557703 NXPH4O95158 308 aa9.59□□□□□ -0.87
SHMT2-234ENST00000557703 CACNG7P62955 275 aa9.59□□□□□ -0.87
SHMT2-234ENST00000557703 POM121L12Q8N7R1 296 aa9.59□□□□□ -0.87
SHMT2-234ENST00000557703 PCNPQ8WW12 178 aaKnown RBP9.59□□□□□ -0.87
SHMT2-234ENST00000557703 LINC00476Q8WZB0 136 aa9.59□□□□□ -0.87
SHMT2-234ENST00000557703 RPP21Q9H633 154 aaKnown RBP9.59□□□□□ -0.87
SHMT2-234ENST00000557703 NAT8Q9UHE5 227 aa9.59□□□□□ -0.87
SHMT2-234ENST00000557703 TMSB15BA0A087X1C1 80 aa9.58□□□□□ -0.88
SHMT2-234ENST00000557703 K7EN84 100 aa9.58□□□□□ -0.88
SHMT2-234ENST00000557703 IGLC6P0CF74 106 aa9.58□□□□□ -0.88
SHMT2-234ENST00000557703 CRYBA4P53673 196 aa9.58□□□□□ -0.88
SHMT2-234ENST00000557703 MRPL23Q16540 153 aaKnown RBP9.58□□□□□ -0.88
SHMT2-234ENST00000557703 DMRTA1Q5VZB9 504 aa9.58□□□□□ -0.88
SHMT2-234ENST00000557703 FER1L6-AS1Q8NA97 138 aa9.58□□□□□ -0.88
SHMT2-234ENST00000557703 SFRP2Q96HF1 295 aa9.58□□□□□ -0.88
SHMT2-234ENST00000557703 ZNF479Q96JC4 524 aa9.58□□□□□ -0.88
SHMT2-234ENST00000557703 OSTCQ9NRP0 149 aa9.58□□□□□ -0.88
SHMT2-234ENST00000557703 GATA1P15976 413 aaPredicted RBP9.57□□□□□ -0.88
SHMT2-234ENST00000557703 FOXA3P55318 350 aaPredicted RBP9.57□□□□□ -0.88
SHMT2-234ENST00000557703 CCL18P55774 89 aa9.57□□□□□ -0.88
SHMT2-234ENST00000557703 ERVFC1-1P60608 527 aa9.57□□□□□ -0.88
SHMT2-234ENST00000557703 RPL19P84098 196 aaKnown RBP9.57□□□□□ -0.88
SHMT2-234ENST00000557703 SPANXN1Q5VSR9 72 aa9.57□□□□□ -0.88
SHMT2-234ENST00000557703 C15orf54Q8N8G6 183 aa9.57□□□□□ -0.88
SHMT2-234ENST00000557703 PRADC1Q9BSG0 188 aa9.57□□□□□ -0.88
SHMT2-234ENST00000557703 GFRA4Q9GZZ7 299 aa9.57□□□□□ -0.88
SHMT2-234ENST00000557703 ICOSQ9Y6W8 199 aa9.57□□□□□ -0.88
SHMT2-234ENST00000557703 GATCO43716 136 aaKnown RBP9.56□□□□□ -0.88
SHMT2-234ENST00000557703 PNRC1Q12796 327 aaPredicted RBP9.56□□□□□ -0.88
SHMT2-234ENST00000557703 RHOHQ15669 191 aa9.56□□□□□ -0.88
SHMT2-234ENST00000557703 VSIG2Q96IQ7 327 aa9.56□□□□□ -0.88
SHMT2-234ENST00000557703 CNFNQ9BYD5 112 aa9.56□□□□□ -0.88
SHMT2-234ENST00000557703 C9JQL5 133 aa9.55□□□□□ -0.88
SHMT2-234ENST00000557703 M0R381 172 aa9.55□□□□□ -0.88
SHMT2-234ENST00000557703 LY6G6CO95867 125 aa9.55□□□□□ -0.88
SHMT2-234ENST00000557703 NUDT3O95989 172 aa9.55□□□□□ -0.88
SHMT2-234ENST00000557703 IGHV3-53P01767 116 aa9.55□□□□□ -0.88
SHMT2-234ENST00000557703 SFTA3P0C7M3 94 aa9.55□□□□□ -0.88
SHMT2-234ENST00000557703 SRSF3P84103 164 aaKnown RBP9.55□□□□□ -0.88
SHMT2-234ENST00000557703 UFSP1Q6NVU6 142 aa9.55□□□□□ -0.88
SHMT2-234ENST00000557703 RNASE7Q9H1E1 156 aaKnown RBP9.55□□□□□ -0.88
SHMT2-234ENST00000557703 NACAE9PAV3 2078 aa9.55□□□□□ -0.88
SHMT2-234ENST00000557703 LYSTQ99698 3801 aa9.54□□□□□ -0.88
SHMT2-234ENST00000557703 TRGC1P0CF51 173 aa9.54□□□□□ -0.88
SHMT2-234ENST00000557703 CTRLP40313 264 aa9.54□□□□□ -0.88
SHMT2-234ENST00000557703 RPL23P62829 140 aaKnown RBP9.54□□□□□ -0.88
SHMT2-234ENST00000557703 NEGR1Q7Z3B1 354 aa9.54□□□□□ -0.88
SHMT2-234ENST00000557703 TSKUQ8WUA8 353 aa9.54□□□□□ -0.88
SHMT2-234ENST00000557703 ISOC2Q96AB3 205 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms