RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 AJUBAQ96IF1 538 aa8.35□□□□□ -1.07
ACTN1-216ENST00000556083 LINC00574Q9H8X3 128 aa8.35□□□□□ -1.07
ACTN1-216ENST00000556083 GPR179Q6PRD1 2367 aa8.35□□□□□ -1.07
ACTN1-216ENST00000556083 KIAA2026Q5HYC2 2103 aa8.35□□□□□ -1.07
ACTN1-216ENST00000556083 CFHR3Q02985 330 aa8.35□□□□□ -1.07
ACTN1-216ENST00000556083 FAM120AOSQ5T036 256 aa8.35□□□□□ -1.07
ACTN1-216ENST00000556083 K7EP13 123 aa8.35□□□□□ -1.07
ACTN1-216ENST00000556083 TNFRSF13BO14836 293 aaPredicted RBP8.35□□□□□ -1.07
ACTN1-216ENST00000556083 CRYBA4P53673 196 aa8.35□□□□□ -1.07
ACTN1-216ENST00000556083 DUX4L9Q6RFH8 374 aaPredicted RBP8.35□□□□□ -1.07
ACTN1-216ENST00000556083 MPDZO75970 2070 aa8.34□□□□□ -1.07
ACTN1-216ENST00000556083 TRBV7-3A0A075B6L6 115 aa8.34□□□□□ -1.07
ACTN1-216ENST00000556083 NXPH4O95158 308 aa8.34□□□□□ -1.07
ACTN1-216ENST00000556083 Q9H8V8 135 aa8.34□□□□□ -1.07
ACTN1-216ENST00000556083 PTPRDP23468 1912 aa8.34□□□□□ -1.07
ACTN1-216ENST00000556083 CTRLP40313 264 aa8.34□□□□□ -1.07
ACTN1-216ENST00000556083 C12orf74Q32Q52 190 aa8.34□□□□□ -1.07
ACTN1-216ENST00000556083 H7C423 109 aa8.33□□□□□ -1.08
ACTN1-216ENST00000556083 ARFGEF3Q5TH69 2177 aa8.33□□□□□ -1.08
ACTN1-216ENST00000556083 C2orf70A6NJV1 201 aa8.33□□□□□ -1.08
ACTN1-216ENST00000556083 TRACP01848 142 aa8.33□□□□□ -1.08
ACTN1-216ENST00000556083 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.33□□□□□ -1.084e-7■■■■□ 20.9
ACTN1-216ENST00000556083 MALRD1Q5VYJ5 2156 aa8.33□□□□□ -1.08
ACTN1-216ENST00000556083 Q71RC1 249 aaPredicted RBP8.33□□□□□ -1.08
ACTN1-216ENST00000556083 PHF3Q92576 2039 aaKnown RBP8.32□□□□□ -1.08
ACTN1-216ENST00000556083 LYPD6Q86Y78 171 aa8.32□□□□□ -1.08
ACTN1-216ENST00000556083 GTSF1LQ9H1H1 148 aa8.32□□□□□ -1.08
ACTN1-216ENST00000556083 GYPEP15421 78 aa8.32□□□□□ -1.08
ACTN1-216ENST00000556083 TIRAPP58753 221 aa8.32□□□□□ -1.08
ACTN1-216ENST00000556083 SMAD5-AS1Q9Y6J3 95 aa8.32□□□□□ -1.08
ACTN1-216ENST00000556083 MED12Q93074 2177 aa8.32□□□□□ -1.08
ACTN1-216ENST00000556083 ZNF407Q9C0G0 2248 aa8.32□□□□□ -1.08
ACTN1-216ENST00000556083 IGKV1OR2-108A0A075B7D4 117 aa8.32□□□□□ -1.08
ACTN1-216ENST00000556083 IGHV4-30-2A0A087WSY4 118 aa8.32□□□□□ -1.08
ACTN1-216ENST00000556083 IGHV3-38A0A0C4DH36 116 aa8.32□□□□□ -1.08
ACTN1-216ENST00000556083 LGALS9O00182 355 aa8.32□□□□□ -1.08
ACTN1-216ENST00000556083 TMEM263Q8WUH6 116 aaKnown RBP8.32□□□□□ -1.08
ACTN1-216ENST00000556083 PRO0255Q9UI72 69 aa8.32□□□□□ -1.08
ACTN1-216ENST00000556083 MP68P56378 58 aa8.31□□□□□ -1.08
ACTN1-216ENST00000556083 KIR2DL5BQ8NHK3 375 aa8.31□□□□□ -1.08
ACTN1-216ENST00000556083 COX7B2Q8TF08 81 aa8.31□□□□□ -1.08
ACTN1-216ENST00000556083 SIRPDQ9H106 197 aa8.31□□□□□ -1.08
ACTN1-216ENST00000556083 TRAV26-2A0A0B4J265 109 aa8.31□□□□□ -1.08
ACTN1-216ENST00000556083 NAA38Q9BRA0 125 aaKnown RBP8.31□□□□□ -1.08
ACTN1-216ENST00000556083 NLRC5Q86WI3 1866 aa8.31□□□□□ -1.08
ACTN1-216ENST00000556083 FRMPD3Q5JV73 1810 aa8.31□□□□□ -1.08
ACTN1-216ENST00000556083 C11orf86A6NJI1 115 aa8.31□□□□□ -1.08
ACTN1-216ENST00000556083 BAALC-AS2P0C853 105 aa8.31□□□□□ -1.08
ACTN1-216ENST00000556083 ADORA2A-AS1P86434 159 aa8.31□□□□□ -1.08
ACTN1-216ENST00000556083 DIAPH2-AS1Q14236 149 aa8.31□□□□□ -1.08
ACTN1-216ENST00000556083 MORN5Q5VZ52 161 aa8.31□□□□□ -1.08
ACTN1-216ENST00000556083 NDUFA11Q86Y39 141 aa8.31□□□□□ -1.08
ACTN1-216ENST00000556083 H3BT86 120 aa8.3□□□□□ -1.08
ACTN1-216ENST00000556083 XCL1P47992 114 aa8.3□□□□□ -1.08
ACTN1-216ENST00000556083 ETDBQ3ZM63 59 aa8.3□□□□□ -1.08
ACTN1-216ENST00000556083 SND1-IT1Q9HBX3 110 aa8.3□□□□□ -1.08
ACTN1-216ENST00000556083 A6NDX4 124 aa8.3□□□□□ -1.08
ACTN1-216ENST00000556083 TRAV4A0A0B4J268 109 aa8.3□□□□□ -1.08
ACTN1-216ENST00000556083 F6UB75 175 aa8.3□□□□□ -1.08
ACTN1-216ENST00000556083 GNRH2O43555 120 aa8.3□□□□□ -1.08
ACTN1-216ENST00000556083 Q8N1Y9 231 aa8.3□□□□□ -1.08
ACTN1-216ENST00000556083 DEFB125Q8N687 156 aa8.3□□□□□ -1.08
ACTN1-216ENST00000556083 IGHV1-58A0A0C4DH39 117 aa8.3□□□□□ -1.08
ACTN1-216ENST00000556083 MAPK1IP1LQ8NDC0 245 aa8.3□□□□□ -1.08
ACTN1-216ENST00000556083 KIR2DL5BA0A0G2JN68 375 aa8.29□□□□□ -1.08
ACTN1-216ENST00000556083 KIR2DL5BA0A0G2JPC4 375 aa8.29□□□□□ -1.08
ACTN1-216ENST00000556083 K7EN84 100 aa8.29□□□□□ -1.08
ACTN1-216ENST00000556083 KIR2DL5AQ8N109 375 aa8.29□□□□□ -1.08
ACTN1-216ENST00000556083 FER1L5A0AVI2 2057 aa8.29□□□□□ -1.08
ACTN1-216ENST00000556083 LYRM9A8MSI8 78 aa8.29□□□□□ -1.08
ACTN1-216ENST00000556083 TP53BP1Q12888 1972 aaPredicted RBP8.29□□□□□ -1.08
ACTN1-216ENST00000556083 C4orf48Q5BLP8 95 aa8.29□□□□□ -1.08
ACTN1-216ENST00000556083 TOMM6Q96B49 74 aa8.29□□□□□ -1.08
ACTN1-216ENST00000556083 DOCK7Q96N67 2140 aa8.29□□□□□ -1.08
ACTN1-216ENST00000556083 HHLA3Q9XRX5 114 aa8.29□□□□□ -1.08
ACTN1-216ENST00000556083 CADP27708 2225 aa8.29□□□□□ -1.08
ACTN1-216ENST00000556083 TEX22C9J3V5 150 aa8.29□□□□□ -1.08
ACTN1-216ENST00000556083 E9PLD3 99 aa8.29□□□□□ -1.08
ACTN1-216ENST00000556083 YLPM1P49750 1951 aaKnown RBP8.28□□□□□ -1.08
ACTN1-216ENST00000556083 ATOX1O00244 68 aa8.28□□□□□ -1.08
ACTN1-216ENST00000556083 IGF1P05019 195 aa8.28□□□□□ -1.08
ACTN1-216ENST00000556083 DOCK10Q96BY6 2186 aa8.28□□□□□ -1.08
ACTN1-216ENST00000556083 A4D1N5 150 aa8.28□□□□□ -1.08
ACTN1-216ENST00000556083 IGLV2-23P01705 113 aa8.28□□□□□ -1.08
ACTN1-216ENST00000556083 IGHV4-38-2P0DP08 117 aa8.28□□□□□ -1.08
ACTN1-216ENST00000556083 FAM167A-AS1Q96KT0 104 aa8.28□□□□□ -1.08
ACTN1-216ENST00000556083 hADV29S1A0JD25 119 aa8.27□□□□□ -1.08
ACTN1-216ENST00000556083 GAGE12HA6NDE8 117 aa8.27□□□□□ -1.08
ACTN1-216ENST00000556083 HIST2H2BCQ6DN03 193 aa8.27□□□□□ -1.08
ACTN1-216ENST00000556083 SELENOKQ9Y6D0 94 aa8.27□□□□□ -1.08
ACTN1-216ENST00000556083 A0A0B4J2C4 111 aa8.27□□□□□ -1.09
ACTN1-216ENST00000556083 A0A0J9YX75 114 aa8.27□□□□□ -1.09
ACTN1-216ENST00000556083 WIPF3A6NGB9 483 aa8.27□□□□□ -1.09
ACTN1-216ENST00000556083 SLURP1P55000 103 aa8.27□□□□□ -1.09
ACTN1-216ENST00000556083 ZNF524Q96C55 264 aa8.27□□□□□ -1.09
ACTN1-216ENST00000556083 WDR81Q562E7 1941 aa8.27□□□□□ -1.09
ACTN1-216ENST00000556083 VSIG2Q96IQ7 327 aa8.27□□□□□ -1.09
ACTN1-216ENST00000556083 LINC01620Q4KN68 170 aa8.27□□□□□ -1.09
ACTN1-216ENST00000556083 DKK2Q9UBU2 259 aa8.27□□□□□ -1.09
ACTN1-216ENST00000556083 AMTNQ6UX39 209 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms