RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 MAPKAPK5-AS1Q8N8E1 139 aa12.21□□□□□ -0.45
TUBB3-209ENST00000555609 OR11H1Q8NG94 326 aa12.21□□□□□ -0.45
TUBB3-209ENST00000555609 OR11H2Q8NH07 326 aa12.21□□□□□ -0.45
TUBB3-209ENST00000555609 C10orf105Q8TEF2 133 aa12.21□□□□□ -0.45
TUBB3-209ENST00000555609 MYMXA0A1B0GTQ4 84 aa12.21□□□□□ -0.46
TUBB3-209ENST00000555609 GNLYP22749 145 aa12.21□□□□□ -0.46
TUBB3-209ENST00000555609 PAPPA-AS1Q5QFB9 102 aa12.21□□□□□ -0.46
TUBB3-209ENST00000555609 C14orf178Q8N769 122 aaPredicted RBP12.21□□□□□ -0.46
TUBB3-209ENST00000555609 RHPN1-AS1Q9BWJ2 59 aa12.21□□□□□ -0.46
TUBB3-209ENST00000555609 TTTY13Q9BZ97 58 aa12.21□□□□□ -0.46
TUBB3-209ENST00000555609 DAZ1Q9NQZ3 744 aaKnown RBP12.21□□□□□ -0.46
TUBB3-209ENST00000555609 UBR5O95071 2799 aaPredicted RBP12.2□□□□□ -0.46
TUBB3-209ENST00000555609 WNK2Q9Y3S1 2297 aa12.2□□□□□ -0.46
TUBB3-209ENST00000555609 HIVEP3Q5T1R4 2406 aa12.2□□□□□ -0.46
TUBB3-209ENST00000555609 KLLNB2CW77 178 aa12.2□□□□□ -0.46
TUBB3-209ENST00000555609 RNASE3P12724 160 aaKnown RBP12.2□□□□□ -0.46
TUBB3-209ENST00000555609 PLA2G2AP14555 144 aa12.2□□□□□ -0.46
TUBB3-209ENST00000555609 TM4SF20Q53R12 229 aa12.2□□□□□ -0.46
TUBB3-209ENST00000555609 C2orf66Q6UXQ4 117 aa12.2□□□□□ -0.46
TUBB3-209ENST00000555609 NHP2Q9NX24 153 aaKnown RBP12.2□□□□□ -0.46
TUBB3-209ENST00000555609 IGHV3OR16-10A0A075B7F0 116 aa12.19□□□□□ -0.46
TUBB3-209ENST00000555609 IGHV4-61A0A0C4DH41 118 aa12.19□□□□□ -0.46
TUBB3-209ENST00000555609 A0A1B0GWB2 263 aa12.19□□□□□ -0.46
TUBB3-209ENST00000555609 RNF223E7ERA6 249 aa12.19□□□□□ -0.46
TUBB3-209ENST00000555609 C19orf84I3L1E1 186 aa12.19□□□□□ -0.46
TUBB3-209ENST00000555609 PF4V1P10720 104 aa12.19□□□□□ -0.46
TUBB3-209ENST00000555609 BRD3OSQ6XYD6 125 aa12.19□□□□□ -0.46
TUBB3-209ENST00000555609 ODF3Q96PU9 254 aa12.19□□□□□ -0.46
TUBB3-209ENST00000555609 NAA38Q9BRA0 125 aaKnown RBP12.19□□□□□ -0.46
TUBB3-209ENST00000555609 TRBV7-3A0A075B6L6 115 aa12.19□□□□□ -0.46
TUBB3-209ENST00000555609 IGLL5B9A064 214 aa12.19□□□□□ -0.46
TUBB3-209ENST00000555609 RPL11P62913 178 aaKnown RBP12.19□□□□□ -0.46
TUBB3-209ENST00000555609 BAALCQ8WXS3 180 aa12.19□□□□□ -0.46
TUBB3-209ENST00000555609 HIST1H4GQ99525 98 aa12.19□□□□□ -0.46
TUBB3-209ENST00000555609 USP9XQ93008 2570 aaPredicted RBP12.18□□□□□ -0.46
TUBB3-209ENST00000555609 H3BUX3 64 aa12.18□□□□□ -0.46
TUBB3-209ENST00000555609 MGPP08493 103 aa12.18□□□□□ -0.46
TUBB3-209ENST00000555609 CFHR3Q02985 330 aa12.18□□□□□ -0.46
TUBB3-209ENST00000555609 C12orf74Q32Q52 190 aa12.18□□□□□ -0.46
TUBB3-209ENST00000555609 CLEC2AQ6UVW9 174 aa12.18□□□□□ -0.46
TUBB3-209ENST00000555609 KIF25-AS1Q9Y6Z4 181 aa12.18□□□□□ -0.46
TUBB3-209ENST00000555609 TMEM89A2RUT3 159 aa12.17□□□□□ -0.46
TUBB3-209ENST00000555609 TMEM238C9JI98 176 aa12.17□□□□□ -0.46
TUBB3-209ENST00000555609 F8W1H4 67 aa12.17□□□□□ -0.46
TUBB3-209ENST00000555609 J3KRW8 73 aa12.17□□□□□ -0.46
TUBB3-209ENST00000555609 SAP30O75446 220 aa12.17□□□□□ -0.46
TUBB3-209ENST00000555609 FOXI2Q6ZQN5 318 aa12.17□□□□□ -0.46
TUBB3-209ENST00000555609 RPL39LQ96EH5 51 aaKnown RBP12.17□□□□□ -0.46
TUBB3-209ENST00000555609 LRRK2Q5S007 2527 aa12.17□□□□□ -0.46
TUBB3-209ENST00000555609 GNRH2O43555 120 aa12.17□□□□□ -0.46
TUBB3-209ENST00000555609 IGHV4-38-2P0DP08 117 aa12.17□□□□□ -0.46
TUBB3-209ENST00000555609 LY6EQ16553 131 aa12.17□□□□□ -0.46
TUBB3-209ENST00000555609 TMEM141Q96I45 108 aa12.17□□□□□ -0.46
TUBB3-209ENST00000555609 CCL19Q99731 98 aa12.17□□□□□ -0.46
TUBB3-209ENST00000555609 KLK15Q9H2R5 256 aa12.17□□□□□ -0.46
TUBB3-209ENST00000555609 CYSLTR1Q9Y271 337 aa12.17□□□□□ -0.46
TUBB3-209ENST00000555609 PRSS29PA6NIE9 313 aa12.16□□□□□ -0.46
TUBB3-209ENST00000555609 IGHV3-11P01762 117 aa12.16□□□□□ -0.46
TUBB3-209ENST00000555609 FAM159AQ6UWV7 190 aa12.16□□□□□ -0.46
TUBB3-209ENST00000555609 VCYO14598 125 aa12.15□□□□□ -0.46
TUBB3-209ENST00000555609 SCGB1A1P11684 91 aa12.15□□□□□ -0.46
TUBB3-209ENST00000555609 LINC00315P59091 139 aa12.15□□□□□ -0.46
TUBB3-209ENST00000555609 ZNF479Q96JC4 524 aa12.15□□□□□ -0.46
TUBB3-209ENST00000555609 UTP20O75691 2785 aaKnown RBP12.15□□□□□ -0.46
TUBB3-209ENST00000555609 K7ERJ3 54 aa12.14□□□□□ -0.47
TUBB3-209ENST00000555609 MSMBP08118 114 aa12.14□□□□□ -0.47
TUBB3-209ENST00000555609 GATA3P23771 443 aa12.14□□□□□ -0.47
TUBB3-209ENST00000555609 POLR2KP53803 58 aaKnown RBP12.14□□□□□ -0.47
TUBB3-209ENST00000555609 TRBV6-5A0A0K0K1A5 114 aa12.14□□□□□ -0.47
TUBB3-209ENST00000555609 TMEM238LA0A1B0GVL6 79 aa12.14□□□□□ -0.47
TUBB3-209ENST00000555609 A6NJY4 79 aa12.14□□□□□ -0.47
TUBB3-209ENST00000555609 HERVK_113P61574 105 aa12.14□□□□□ -0.47
TUBB3-209ENST00000555609 J3QKU1 62 aa12.13□□□□□ -0.47
TUBB3-209ENST00000555609 BLCAPP62952 87 aa12.13□□□□□ -0.47
TUBB3-209ENST00000555609 RRN3P1Q2M238 152 aa12.13□□□□□ -0.47
TUBB3-209ENST00000555609 TIMM17AQ99595 171 aa12.13□□□□□ -0.47
TUBB3-209ENST00000555609 HRNRQ86YZ3 2850 aaPredicted RBP12.13□□□□□ -0.47
TUBB3-209ENST00000555609 F6UB75 175 aa12.12□□□□□ -0.47
TUBB3-209ENST00000555609 LGALS1P09382 135 aaKnown RBP12.12□□□□□ -0.47
TUBB3-209ENST00000555609 DSCR9P59020 149 aa12.12□□□□□ -0.47
TUBB3-209ENST00000555609 DCANP1Q8TF63 244 aa12.12□□□□□ -0.47
TUBB3-209ENST00000555609 KIR2DL4Q99706 377 aa12.12□□□□□ -0.47
TUBB3-209ENST00000555609 PRADC1Q9BSG0 188 aa12.12□□□□□ -0.47
TUBB3-209ENST00000555609 LGALS9O00182 355 aa12.12□□□□□ -0.47
TUBB3-209ENST00000555609 RIPPLY3P57055 190 aa12.12□□□□□ -0.47
TUBB3-209ENST00000555609 PMVKQ15126 192 aa12.12□□□□□ -0.47
TUBB3-209ENST00000555609 IGIPA6NJ69 53 aa12.11□□□□□ -0.47
TUBB3-209ENST00000555609 HOXA3O43365 443 aaPredicted RBP12.11□□□□□ -0.47
TUBB3-209ENST00000555609 SYT8Q8NBV8 401 aa12.11□□□□□ -0.47
TUBB3-209ENST00000555609 SPTAN1Q13813 2472 aaKnown RBP12.11□□□□□ -0.47
TUBB3-209ENST00000555609 B4DSR2 109 aa12.1□□□□□ -0.47
TUBB3-209ENST00000555609 J3QR89 54 aa12.1□□□□□ -0.47
TUBB3-209ENST00000555609 COX6B1P14854 86 aa12.1□□□□□ -0.47
TUBB3-209ENST00000555609 ATP5J2P56134 94 aa12.1□□□□□ -0.47
TUBB3-209ENST00000555609 DEFB1P60022 68 aa12.1□□□□□ -0.47
TUBB3-209ENST00000555609 SCGB2A2Q13296 93 aa12.1□□□□□ -0.47
TUBB3-209ENST00000555609 ZFP2Q6ZN57 461 aa12.1□□□□□ -0.47
TUBB3-209ENST00000555609 C9orf85Q96MD7 179 aa12.1□□□□□ -0.47
TUBB3-209ENST00000555609 SPTBN1Q01082 2364 aaKnown RBP12.1□□□□□ -0.47
TUBB3-209ENST00000555609 TRBV27A0A0K0K1C4 114 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms