RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 SMIM15Q7Z3B0 74 aa7.42□□□□□ -1.22
NEK9-205ENST00000555405 AMN1Q8IY45 258 aa7.42□□□□□ -1.22
NEK9-205ENST00000555405 OR11H2Q8NH07 326 aa7.42□□□□□ -1.22
NEK9-205ENST00000555405 NCR2O95944 276 aa7.42□□□□□ -1.22
NEK9-205ENST00000555405 MUC4Q99102 2169 aa7.42□□□□□ -1.22
NEK9-205ENST00000555405 SMIM17P0DL12 118 aa7.42□□□□□ -1.22
NEK9-205ENST00000555405 RNASE3P12724 160 aaKnown RBP7.42□□□□□ -1.22
NEK9-205ENST00000555405 APOC4P55056 127 aa7.42□□□□□ -1.22
NEK9-205ENST00000555405 PYGO2Q9BRQ0 406 aa7.42□□□□□ -1.22
NEK9-205ENST00000555405 GAGE12BA1L429 117 aa7.41□□□□□ -1.22
NEK9-205ENST00000555405 GAGE7O76087 117 aa7.41□□□□□ -1.22
NEK9-205ENST00000555405 GAGE12FP0CL80 117 aa7.41□□□□□ -1.22
NEK9-205ENST00000555405 GAGE12GP0CL81 117 aa7.41□□□□□ -1.22
NEK9-205ENST00000555405 GAGE12IP0CL82 117 aa7.41□□□□□ -1.22
NEK9-205ENST00000555405 HTN3P15516 51 aa7.41□□□□□ -1.22
NEK9-205ENST00000555405 PDZD11Q5EBL8 140 aa7.41□□□□□ -1.22
NEK9-205ENST00000555405 TRGV11A0A075B6L2 103 aa7.41□□□□□ -1.22
NEK9-205ENST00000555405 TRBV24-1A0A075B6N3 115 aa7.41□□□□□ -1.22
NEK9-205ENST00000555405 TRAV26-2A0A0B4J265 109 aa7.41□□□□□ -1.22
NEK9-205ENST00000555405 APCSP02743 223 aa7.41□□□□□ -1.22
NEK9-205ENST00000555405 CT83Q5H943 113 aa7.41□□□□□ -1.22
NEK9-205ENST00000555405 ODF3Q96PU9 254 aa7.41□□□□□ -1.22
NEK9-205ENST00000555405 TENM3Q9P273 2699 aa7.41□□□□□ -1.22
NEK9-205ENST00000555405 LOC389332A0A1B0GUA5 103 aa7.4□□□□□ -1.22
NEK9-205ENST00000555405 NDUFA6P56556 154 aa7.4□□□□□ -1.22
NEK9-205ENST00000555405 TRGV2A0A075B6R0 118 aa7.4□□□□□ -1.22
NEK9-205ENST00000555405 TRBV7-9A0A0J9YWB2 115 aa7.4□□□□□ -1.22
NEK9-205ENST00000555405 S100A6P06703 90 aa7.4□□□□□ -1.22
NEK9-205ENST00000555405 SLAQ13239 276 aa7.4□□□□□ -1.22
NEK9-205ENST00000555405 SAMD5Q5TGI4 173 aa7.4□□□□□ -1.22
NEK9-205ENST00000555405 MORN3Q6PF18 240 aaPredicted RBP7.4□□□□□ -1.22
NEK9-205ENST00000555405 AMBPP02760 352 aa7.4□□□□□ -1.23
NEK9-205ENST00000555405 ZNF415Q09FC8 603 aa7.4□□□□□ -1.23
NEK9-205ENST00000555405 COX8CQ7Z4L0 72 aa7.4□□□□□ -1.23
NEK9-205ENST00000555405 ZNF575Q86XF7 245 aa7.4□□□□□ -1.23
NEK9-205ENST00000555405 F2Z2F3 143 aa7.39□□□□□ -1.23
NEK9-205ENST00000555405 IGLC6P0CF74 106 aa7.39□□□□□ -1.23
NEK9-205ENST00000555405 GATA1P15976 413 aaPredicted RBP7.39□□□□□ -1.23
NEK9-205ENST00000555405 ZNF56Q15929 161 aa7.39□□□□□ -1.23
NEK9-205ENST00000555405 ZMAT5Q9UDW3 170 aaKnown RBP7.39□□□□□ -1.23
NEK9-205ENST00000555405 SRIP30626 198 aa7.39□□□□□ -1.23
NEK9-205ENST00000555405 TMEM136Q6ZRR5 245 aa7.39□□□□□ -1.23
NEK9-205ENST00000555405 Q6ZTI0 123 aa7.39□□□□□ -1.23
NEK9-205ENST00000555405 SAMD10Q9BYL1 202 aa7.39□□□□□ -1.23
NEK9-205ENST00000555405 GFRA4Q9GZZ7 299 aa7.39□□□□□ -1.23
NEK9-205ENST00000555405 TRGC1P0CF51 173 aa7.39□□□□□ -1.23
NEK9-205ENST00000555405 CKS2P33552 79 aa7.38□□□□□ -1.23
NEK9-205ENST00000555405 RAB5BP61020 215 aa7.38□□□□□ -1.23
NEK9-205ENST00000555405 SYT8Q8NBV8 401 aa7.38□□□□□ -1.23
NEK9-205ENST00000555405 YPEL4Q96NS1 127 aa7.38□□□□□ -1.23
NEK9-205ENST00000555405 IQCJQ1A5X6 159 aa7.38□□□□□ -1.23
NEK9-205ENST00000555405 K7EIL1 84 aa7.37□□□□□ -1.23
NEK9-205ENST00000555405 WDR73Q6P4I2 378 aa7.37□□□□□ -1.23
NEK9-205ENST00000555405 BAGE3Q86Y29 109 aa7.37□□□□□ -1.23
NEK9-205ENST00000555405 FAM231BA6NCW3 169 aa7.37□□□□□ -1.23
NEK9-205ENST00000555405 GAS8-AS1O95177 125 aa7.37□□□□□ -1.23
NEK9-205ENST00000555405 HLA-DQA1P01909 254 aa7.37□□□□□ -1.23
NEK9-205ENST00000555405 S100A8P05109 93 aa7.37□□□□□ -1.23
NEK9-205ENST00000555405 DEFA6Q01524 100 aa7.37□□□□□ -1.23
NEK9-205ENST00000555405 EGFEM1PQ0D2K5 195 aa7.37□□□□□ -1.23
NEK9-205ENST00000555405 SBSPONQ8IVN8 264 aa7.37□□□□□ -1.23
NEK9-205ENST00000555405 TMEM256Q8N2U0 113 aa7.37□□□□□ -1.23
NEK9-205ENST00000555405 STAB2Q8WWQ8 2551 aa7.37□□□□□ -1.23
NEK9-205ENST00000555405 D6R8Y8 96 aa7.36□□□□□ -1.23
NEK9-205ENST00000555405 OR5AL1P0C617 328 aa7.36□□□□□ -1.23
NEK9-205ENST00000555405 DNHD1Q96M86 4753 aa7.36□□□□□ -1.23
NEK9-205ENST00000555405 A8MTW9 85 aa7.36□□□□□ -1.23
NEK9-205ENST00000555405 CTRLP40313 264 aa7.36□□□□□ -1.23
NEK9-205ENST00000555405 TDRG1Q3Y452 100 aa7.36□□□□□ -1.23
NEK9-205ENST00000555405 AP1S3Q96PC3 154 aa7.36□□□□□ -1.23
NEK9-205ENST00000555405 CSNK1G2-AS1Q8NCQ2 148 aa7.36□□□□□ -1.23
NEK9-205ENST00000555405 OR4C5Q8NGB2 326 aa7.36□□□□□ -1.23
NEK9-205ENST00000555405 GNB1LQ9BYB4 327 aa7.36□□□□□ -1.23
NEK9-205ENST00000555405 IGHV4-28A0A0C4DH34 117 aa7.35□□□□□ -1.23
NEK9-205ENST00000555405 M0R2P5 195 aa7.35□□□□□ -1.23
NEK9-205ENST00000555405 MRPL51Q4U2R6 128 aaKnown RBP7.35□□□□□ -1.23
NEK9-205ENST00000555405 TMEM263Q8WUH6 116 aaKnown RBP7.35□□□□□ -1.23
NEK9-205ENST00000555405 A0A1B0GXF2 115 aa7.35□□□□□ -1.23
NEK9-205ENST00000555405 WIPF1O43516 503 aa7.35□□□□□ -1.23
NEK9-205ENST00000555405 P0DMU3 169 aa7.35□□□□□ -1.23
NEK9-205ENST00000555405 FAM231AP0DMU4 169 aa7.35□□□□□ -1.23
NEK9-205ENST00000555405 FAM231CP0DMU5 169 aa7.35□□□□□ -1.23
NEK9-205ENST00000555405 CACNG7P62955 275 aa7.35□□□□□ -1.23
NEK9-205ENST00000555405 FAM222AQ5U5X8 452 aa7.35□□□□□ -1.23
NEK9-205ENST00000555405 ATP5L2Q7Z4Y8 100 aa7.35□□□□□ -1.23
NEK9-205ENST00000555405 SNRPEP62304 92 aaKnown RBP7.34□□□□□ -1.23
NEK9-205ENST00000555405 FAM104BQ5XKR9 115 aa7.34□□□□□ -1.23
NEK9-205ENST00000555405 NEGR1Q7Z3B1 354 aa7.34□□□□□ -1.23
NEK9-205ENST00000555405 TRAV9-1A0A075B6T8 112 aa7.34□□□□□ -1.23
NEK9-205ENST00000555405 HIST1H2BKO60814 126 aa7.34□□□□□ -1.23
NEK9-205ENST00000555405 HIST1H2BJP06899 126 aa7.34□□□□□ -1.23
NEK9-205ENST00000555405 HIST1H2BOP23527 126 aa7.34□□□□□ -1.23
NEK9-205ENST00000555405 HIST1H2BBP33778 126 aa7.34□□□□□ -1.23
NEK9-205ENST00000555405 HIST1H2BDP58876 126 aa7.34□□□□□ -1.23
NEK9-205ENST00000555405 HIST1H2BCP62807 126 aa7.34□□□□□ -1.23
NEK9-205ENST00000555405 HIST2H2BEQ16778 126 aa7.34□□□□□ -1.23
NEK9-205ENST00000555405 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.34□□□□□ -1.23
NEK9-205ENST00000555405 HIST1H2BHQ93079 126 aa7.34□□□□□ -1.23
NEK9-205ENST00000555405 PRELID3AQ96N28 172 aa7.34□□□□□ -1.23
NEK9-205ENST00000555405 HIST1H2BNQ99877 126 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms