RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 PEA15Q15121 130 aa7.48□□□□□ -1.21
TMEM260-206ENST00000555046 LINC01559Q495D7 138 aa7.48□□□□□ -1.21
TMEM260-206ENST00000555046 DNLZQ5SXM8 178 aa7.48□□□□□ -1.21
TMEM260-206ENST00000555046 LGALS9CQ6DKI2 356 aa7.48□□□□□ -1.21
TMEM260-206ENST00000555046 SYT8Q8NBV8 401 aa7.48□□□□□ -1.21
TMEM260-206ENST00000555046 FAM210AQ96ND0 272 aa7.48□□□□□ -1.21
TMEM260-206ENST00000555046 IL36BQ9NZH7 164 aa7.48□□□□□ -1.21
TMEM260-206ENST00000555046 IGKV3D-20A0A0C4DH25 116 aa7.47□□□□□ -1.21
TMEM260-206ENST00000555046 P0DMU3 169 aa7.47□□□□□ -1.21
TMEM260-206ENST00000555046 FAM231AP0DMU4 169 aa7.47□□□□□ -1.21
TMEM260-206ENST00000555046 FAM231CP0DMU5 169 aa7.47□□□□□ -1.21
TMEM260-206ENST00000555046 MGST1P10620 155 aaKnown RBP7.47□□□□□ -1.21
TMEM260-206ENST00000555046 RPS20P60866 119 aaKnown RBP7.47□□□□□ -1.21
TMEM260-206ENST00000555046 ZNF876PQ49A33 203 aa7.47□□□□□ -1.21
TMEM260-206ENST00000555046 CENPWQ5EE01 88 aa7.47□□□□□ -1.21
TMEM260-206ENST00000555046 OR4C5Q8NGB2 326 aa7.47□□□□□ -1.21
TMEM260-206ENST00000555046 MRPL16Q9NX20 251 aaKnown RBP7.47□□□□□ -1.21
TMEM260-206ENST00000555046 C11orf21Q9P2W6 132 aa7.47□□□□□ -1.21
TMEM260-206ENST00000555046 TRAV4A0A0B4J268 109 aa7.46□□□□□ -1.22
TMEM260-206ENST00000555046 TRGV4A0A0C4DH28 118 aa7.46□□□□□ -1.22
TMEM260-206ENST00000555046 RAB19A4D1S5 217 aa7.46□□□□□ -1.22
TMEM260-206ENST00000555046 C9JCJ5 164 aa7.46□□□□□ -1.22
TMEM260-206ENST00000555046 M0R036 132 aa7.46□□□□□ -1.22
TMEM260-206ENST00000555046 LY6G6CO95867 125 aa7.46□□□□□ -1.22
TMEM260-206ENST00000555046 CXCL1P09341 107 aa7.46□□□□□ -1.22
TMEM260-206ENST00000555046 TOR2AQ5JU69 321 aa7.46□□□□□ -1.22
TMEM260-206ENST00000555046 PRR27Q6MZM9 219 aa7.46□□□□□ -1.22
TMEM260-206ENST00000555046 TMEM88Q6PEY1 159 aa7.46□□□□□ -1.22
TMEM260-206ENST00000555046 NHLRC2Q8NBF2 726 aa7.46□□□□□ -1.22
TMEM260-206ENST00000555046 C9orf85Q96MD7 179 aa7.46□□□□□ -1.22
TMEM260-206ENST00000555046 KRTAP4-5Q9BYR2 181 aa7.46□□□□□ -1.22
TMEM260-206ENST00000555046 PRO0255Q9UI72 69 aa7.46□□□□□ -1.22
TMEM260-206ENST00000555046 HHLA3Q9XRX5 114 aa7.46□□□□□ -1.22
TMEM260-206ENST00000555046 PHLDA3Q9Y5J5 127 aa7.46□□□□□ -1.22
TMEM260-206ENST00000555046 A8MWV9 139 aa7.45□□□□□ -1.22
TMEM260-206ENST00000555046 P01737 135 aa7.45□□□□□ -1.22
TMEM260-206ENST00000555046 MED14OSP0DP75 135 aa7.45□□□□□ -1.22
TMEM260-206ENST00000555046 FAM3BP58499 235 aaPredicted RBP7.45□□□□□ -1.22
TMEM260-206ENST00000555046 FAM74A3Q4VXF1 159 aa7.45□□□□□ -1.22
TMEM260-206ENST00000555046 LINC00476Q8WZB0 136 aa7.45□□□□□ -1.22
TMEM260-206ENST00000555046 DERL1Q9BUN8 251 aa7.45□□□□□ -1.22
TMEM260-206ENST00000555046 LY96Q9Y6Y9 160 aa7.45□□□□□ -1.22
TMEM260-206ENST00000555046 TRAV26-1A0A087WT03 109 aa7.44□□□□□ -1.22
TMEM260-206ENST00000555046 PAX4O43316 350 aa7.44□□□□□ -1.22
TMEM260-206ENST00000555046 NUDT3O95989 172 aa7.44□□□□□ -1.22
TMEM260-206ENST00000555046 ARMS2P0C7Q2 107 aa7.44□□□□□ -1.22
TMEM260-206ENST00000555046 RNASE3P12724 160 aaKnown RBP7.44□□□□□ -1.22
TMEM260-206ENST00000555046 CEBPGP53567 150 aa7.44□□□□□ -1.22
TMEM260-206ENST00000555046 CCL18P55774 89 aa7.44□□□□□ -1.22
TMEM260-206ENST00000555046 RNF212Q495C1 297 aa7.44□□□□□ -1.22
TMEM260-206ENST00000555046 SH2D6Q7Z4S9 175 aa7.44□□□□□ -1.22
TMEM260-206ENST00000555046 PARLQ9H300 379 aa7.44□□□□□ -1.22
TMEM260-206ENST00000555046 TMSB15BA0A087X1C1 80 aa7.43□□□□□ -1.22
TMEM260-206ENST00000555046 GRIFINA4D1Z8 144 aa7.43□□□□□ -1.22
TMEM260-206ENST00000555046 F2Z2F3 143 aa7.43□□□□□ -1.22
TMEM260-206ENST00000555046 IGLV2-8P01709 118 aa7.43□□□□□ -1.22
TMEM260-206ENST00000555046 IGHV3-53P01767 116 aa7.43□□□□□ -1.22
TMEM260-206ENST00000555046 ZFP2Q6ZN57 461 aa7.43□□□□□ -1.22
TMEM260-206ENST00000555046 ZFP82Q8N141 532 aa7.43□□□□□ -1.22
TMEM260-206ENST00000555046 POM121L12Q8N7R1 296 aa7.43□□□□□ -1.22
TMEM260-206ENST00000555046 OR2D3Q8NGH3 330 aa7.43□□□□□ -1.22
TMEM260-206ENST00000555046 OCC1Q8TAD7 63 aa7.43□□□□□ -1.22
TMEM260-206ENST00000555046 PCNPQ8WW12 178 aaKnown RBP7.43□□□□□ -1.22
TMEM260-206ENST00000555046 SMIM7Q9BQ49 75 aa7.43□□□□□ -1.22
TMEM260-206ENST00000555046 SCRT2Q9NQ03 307 aa7.43□□□□□ -1.22
TMEM260-206ENST00000555046 DMBT1Q9UGM3 2413 aaPredicted RBP7.42□□□□□ -1.22
TMEM260-206ENST00000555046 A0A0J9YY99 117 aa7.42□□□□□ -1.22
TMEM260-206ENST00000555046 A0A1W2PPQ1 181 aa7.42□□□□□ -1.22
TMEM260-206ENST00000555046 C19orf71A6NCJ1 209 aa7.42□□□□□ -1.22
TMEM260-206ENST00000555046 PGPEP1LA6NFU8 196 aa7.42□□□□□ -1.22
TMEM260-206ENST00000555046 ZNF727A8MUV8 499 aa7.42□□□□□ -1.22
TMEM260-206ENST00000555046 H3BVH4 76 aa7.42□□□□□ -1.22
TMEM260-206ENST00000555046 J3QL48 77 aa7.42□□□□□ -1.22
TMEM260-206ENST00000555046 RHODO00212 210 aa7.42□□□□□ -1.22
TMEM260-206ENST00000555046 RS1O15537 224 aa7.42□□□□□ -1.22
TMEM260-206ENST00000555046 SRP19P09132 144 aaKnown RBP7.42□□□□□ -1.22
TMEM260-206ENST00000555046 OR5AL1P0C617 328 aa7.42□□□□□ -1.22
TMEM260-206ENST00000555046 HOXA5P20719 270 aa7.42□□□□□ -1.22
TMEM260-206ENST00000555046 CRYBA4P53673 196 aa7.42□□□□□ -1.22
TMEM260-206ENST00000555046 FHL2Q14192 279 aa7.42□□□□□ -1.22
TMEM260-206ENST00000555046 MRPL23Q16540 153 aaKnown RBP7.42□□□□□ -1.22
TMEM260-206ENST00000555046 TMEM241Q24JQ0 296 aa7.42□□□□□ -1.22
TMEM260-206ENST00000555046 UBE2DNLQ8IWF7 75 aa7.42□□□□□ -1.22
TMEM260-206ENST00000555046 PRADC1Q9BSG0 188 aa7.42□□□□□ -1.22
TMEM260-206ENST00000555046 SSBP4Q9BWG4 385 aaPredicted RBP7.42□□□□□ -1.22
TMEM260-206ENST00000555046 TRBV20OR9-2A0A075B6H5 130 aa7.41□□□□□ -1.22
TMEM260-206ENST00000555046 SPANXN1Q5VSR9 72 aa7.41□□□□□ -1.22
TMEM260-206ENST00000555046 CFAP126Q5VTH2 177 aa7.41□□□□□ -1.22
TMEM260-206ENST00000555046 NUDT10Q8NFP7 164 aa7.41□□□□□ -1.22
TMEM260-206ENST00000555046 NUDT11Q96G61 164 aa7.41□□□□□ -1.22
TMEM260-206ENST00000555046 ZNF479Q96JC4 524 aa7.41□□□□□ -1.22
TMEM260-206ENST00000555046 ICOSQ9Y6W8 199 aa7.41□□□□□ -1.22
TMEM260-206ENST00000555046 TRBV6-4A0A1B0GX49 114 aa7.4□□□□□ -1.22
TMEM260-206ENST00000555046 A8MWL6 223 aa7.4□□□□□ -1.22
TMEM260-206ENST00000555046 M0R381 172 aa7.4□□□□□ -1.22
TMEM260-206ENST00000555046 SNAI2O43623 268 aa7.4□□□□□ -1.22
TMEM260-206ENST00000555046 SFTA3P0C7M3 94 aa7.4□□□□□ -1.22
TMEM260-206ENST00000555046 ERVFC1-1P60608 527 aa7.4□□□□□ -1.22
TMEM260-206ENST00000555046 CACNG7P62955 275 aa7.4□□□□□ -1.22
TMEM260-206ENST00000555046 SOHLH1Q5JUK2 328 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms