RNA–Protein interactions for RNA: ENST00000553624.5

KTN1-210, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-210ENST00000553624 CLECL1Q8IZS7 167 aa2.24□□□□□ -2.05
KTN1-210ENST00000553624 LINC00304Q8N9R0 145 aa2.24□□□□□ -2.05
KTN1-210ENST00000553624 C4orf3Q8WVX3 66 aa2.24□□□□□ -2.05
KTN1-210ENST00000553624 TMEM141Q96I45 108 aa2.24□□□□□ -2.05
KTN1-210ENST00000553624 TMEM106BQ9NUM4 274 aa2.24□□□□□ -2.05
KTN1-210ENST00000553624 COL4A2P08572 1712 aa2.24□□□□□ -2.05
KTN1-210ENST00000553624 RTEL1-TNFRSF6BF6WH68 1400 aa2.24□□□□□ -2.05
KTN1-210ENST00000553624 C10orf71Q711Q0 1435 aa2.24□□□□□ -2.05
KTN1-210ENST00000553624 CASKIN1Q8WXD9 1431 aa2.24□□□□□ -2.05
KTN1-210ENST00000553624 MCM3APO60318 1980 aa2.23□□□□□ -2.05
KTN1-210ENST00000553624 PXDNLA1KZ92 1463 aa2.23□□□□□ -2.05
KTN1-210ENST00000553624 IFT140Q96RY7 1462 aa2.23□□□□□ -2.05
KTN1-210ENST00000553624 PIGBOS1A0A0B4J2F0 54 aa2.23□□□□□ -2.05
KTN1-210ENST00000553624 UBE2L5PA0A1B0GUS4 154 aa2.23□□□□□ -2.05
KTN1-210ENST00000553624 A0A1W2PNN7 141 aa2.23□□□□□ -2.05
KTN1-210ENST00000553624 COX7CP15954 63 aa2.23□□□□□ -2.05
KTN1-210ENST00000553624 UBE2L3P68036 154 aaKnown RBP2.23□□□□□ -2.05
KTN1-210ENST00000553624 DCDP81605 110 aaKnown RBP2.23□□□□□ -2.05
KTN1-210ENST00000553624 INSL4Q14641 139 aa2.23□□□□□ -2.05
KTN1-210ENST00000553624 SPACA4Q8TDM5 124 aa2.23□□□□□ -2.05
KTN1-210ENST00000553624 DPH3P1Q9H4G8 78 aa2.23□□□□□ -2.05
KTN1-210ENST00000553624 CPSF1Q10570 1443 aaKnown RBP2.23□□□□□ -2.05
KTN1-210ENST00000553624 LAMB1P07942 1786 aa2.23□□□□□ -2.05
KTN1-210ENST00000553624 ADGRB3O60242 1522 aa2.22□□□□□ -2.05
KTN1-210ENST00000553624 ZSWIM8A7E2V4 1837 aa2.22□□□□□ -2.05
KTN1-210ENST00000553624 SHROOM2Q13796 1616 aa2.22□□□□□ -2.05
KTN1-210ENST00000553624 SPRNQ5BIV9 151 aa2.22□□□□□ -2.05
KTN1-210ENST00000553624 SLC48A1Q6P1K1 146 aa2.22□□□□□ -2.05
KTN1-210ENST00000553624 LCN9Q8WX39 176 aa2.22□□□□□ -2.05
KTN1-210ENST00000553624 TVP23CQ96ET8 276 aa2.22□□□□□ -2.05
KTN1-210ENST00000553624 VAMP8Q9BV40 100 aa2.22□□□□□ -2.05
KTN1-210ENST00000553624 LAMB4A4D0S4 1761 aa2.22□□□□□ -2.05
KTN1-210ENST00000553624 PLXNA4Q9HCM2 1894 aa2.22□□□□□ -2.05
KTN1-210ENST00000553624 ABCC3O15438 1527 aa2.22□□□□□ -2.05
KTN1-210ENST00000553624 TOPAZ1Q8N9V7 1692 aa2.22□□□□□ -2.05
KTN1-210ENST00000553624 RBAKDNA6NC62 111 aa2.21□□□□□ -2.06
KTN1-210ENST00000553624 PLXNA2O75051 1894 aa2.21□□□□□ -2.06
KTN1-210ENST00000553624 MT-ATP8P03928 68 aa2.21□□□□□ -2.06
KTN1-210ENST00000553624 IGLC1P0CG04 106 aa2.21□□□□□ -2.06
KTN1-210ENST00000553624 CBLN1P23435 193 aa2.21□□□□□ -2.06
KTN1-210ENST00000553624 POLR2JP52435 117 aaKnown RBP2.21□□□□□ -2.06
KTN1-210ENST00000553624 Q0VG73 95 aa2.21□□□□□ -2.06
KTN1-210ENST00000553624 SDK2Q58EX2 2172 aa2.21□□□□□ -2.06
KTN1-210ENST00000553624 PYY3Q5JQD4 70 aa2.21□□□□□ -2.06
KTN1-210ENST00000553624 PATE1Q8WXA2 126 aa2.21□□□□□ -2.06
KTN1-210ENST00000553624 LINC00052Q96N35 136 aa2.21□□□□□ -2.06
KTN1-210ENST00000553624 ABCA3Q99758 1704 aa2.21□□□□□ -2.06
KTN1-210ENST00000553624 KIAA1549Q9HCM3 1950 aa2.2□□□□□ -2.06
KTN1-210ENST00000553624 ABCC5O15440 1437 aa2.2□□□□□ -2.06
KTN1-210ENST00000553624 CXorf51AA0A1B0GTR3 108 aa2.2□□□□□ -2.06
KTN1-210ENST00000553624 SLC25A6P12236 298 aa2.2□□□□□ -2.06
KTN1-210ENST00000553624 RHOHQ15669 191 aa2.2□□□□□ -2.06
KTN1-210ENST00000553624 C9orf116Q5BN46 136 aaPredicted RBP2.2□□□□□ -2.06
KTN1-210ENST00000553624 COMMD6Q7Z4G1 85 aa2.2□□□□□ -2.06
KTN1-210ENST00000553624 NDUFA11Q86Y39 141 aa2.2□□□□□ -2.06
KTN1-210ENST00000553624 SCN3AQ9NY46 2000 aa2.19□□□□□ -2.06
KTN1-210ENST00000553624 TRAV17A0A0B4J275 112 aa2.19□□□□□ -2.06
KTN1-210ENST00000553624 ATG5Q9H1Y0 275 aa2.19□□□□□ -2.06
KTN1-210ENST00000553624 ORMDL1Q9P0S3 153 aa2.19□□□□□ -2.06
KTN1-210ENST00000553624 C22orf24Q9Y442 160 aa2.19□□□□□ -2.06
KTN1-210ENST00000553624 CITO14578 2027 aa2.18□□□□□ -2.06
KTN1-210ENST00000553624 SCAPERQ9BY12 1400 aa2.18□□□□□ -2.06
KTN1-210ENST00000553624 ANK1P16157 1881 aa2.18□□□□□ -2.06
KTN1-210ENST00000553624 EML5Q05BV3 1969 aa2.18□□□□□ -2.06
KTN1-210ENST00000553624 KDM6BO15054 1643 aa2.18□□□□□ -2.06
KTN1-210ENST00000553624 MUC4Q99102 2169 aa2.18□□□□□ -2.06
KTN1-210ENST00000553624 CCL16O15467 120 aa2.18□□□□□ -2.06
KTN1-210ENST00000553624 MRPL35Q9NZE8 188 aaKnown RBP2.18□□□□□ -2.06
KTN1-210ENST00000553624 A0A0J9YY99 117 aa2.17□□□□□ -2.06
KTN1-210ENST00000553624 TRBV10-3A0A0K0K1G6 114 aa2.17□□□□□ -2.06
KTN1-210ENST00000553624 TMEM30CPA0ZSE6 113 aa2.17□□□□□ -2.06
KTN1-210ENST00000553624 F8W1H4 67 aa2.17□□□□□ -2.06
KTN1-210ENST00000553624 CCKP06307 115 aa2.17□□□□□ -2.06
KTN1-210ENST00000553624 UBE2G1P62253 170 aa2.17□□□□□ -2.06
KTN1-210ENST00000553624 RBM3P98179 157 aaKnown RBP2.17□□□□□ -2.06
KTN1-210ENST00000553624 S100A7L2Q5SY68 101 aa2.17□□□□□ -2.06
KTN1-210ENST00000553624 RPL7L1Q6DKI1 246 aaKnown RBP2.17□□□□□ -2.06
KTN1-210ENST00000553624 UNQ5815/PRO19632Q6UWF5 114 aa2.17□□□□□ -2.06
KTN1-210ENST00000553624 LINC00299Q6ZSB3 139 aa2.17□□□□□ -2.06
KTN1-210ENST00000553624 LAMC3Q9Y6N6 1575 aa2.17□□□□□ -2.06
KTN1-210ENST00000553624 TRPM7Q96QT4 1865 aa2.17□□□□□ -2.06
KTN1-210ENST00000553624 MARF1Q9Y4F3 1742 aaKnown RBP2.17□□□□□ -2.06
KTN1-210ENST00000553624 MYO9BQ13459 2157 aa2.16□□□□□ -2.06
KTN1-210ENST00000553624 MUC22E2RYF6 1773 aaPredicted RBP2.16□□□□□ -2.06
KTN1-210ENST00000553624 TRBV6-8A0A0A6YYG3 113 aa2.16□□□□□ -2.06
KTN1-210ENST00000553624 TRBV10-1A0A0K0K1A3 114 aa2.16□□□□□ -2.06
KTN1-210ENST00000553624 A6NIN4 97 aa2.16□□□□□ -2.06
KTN1-210ENST00000553624 H3BRN7 92 aa2.16□□□□□ -2.06
KTN1-210ENST00000553624 IGKV4-1P06312 121 aa2.16□□□□□ -2.06
KTN1-210ENST00000553624 KIAA2026Q5HYC2 2103 aa2.16□□□□□ -2.06
KTN1-210ENST00000553624 C10orf55Q5SWW7 151 aa2.16□□□□□ -2.06
KTN1-210ENST00000553624 LYPD5Q6UWN5 251 aa2.16□□□□□ -2.06
KTN1-210ENST00000553624 C15orf53Q8NAA6 179 aa2.16□□□□□ -2.06
KTN1-210ENST00000553624 PRO1933Q9H354 126 aa2.16□□□□□ -2.06
KTN1-210ENST00000553624 PRDM15P57071 1507 aaPredicted RBP2.16□□□□□ -2.06
KTN1-210ENST00000553624 MAP3K1Q13233 1512 aa2.16□□□□□ -2.06
KTN1-210ENST00000553624 PLEKHH2Q8IVE3 1493 aa2.15□□□□□ -2.06
KTN1-210ENST00000553624 PXDNQ92626 1479 aa2.15□□□□□ -2.06
KTN1-210ENST00000553624 LTBP2Q14767 1821 aa2.15□□□□□ -2.06
KTN1-210ENST00000553624 ANKRD36BQ8N2N9 1353 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms