RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 CAMPP49913 170 aa10□□□□□ -0.81
APEX1-205ENST00000553555 HIST1H2BDP58876 126 aa10□□□□□ -0.81
APEX1-205ENST00000553555 HIST1H2BCP62807 126 aa10□□□□□ -0.81
APEX1-205ENST00000553555 HBBP68871 147 aa10□□□□□ -0.81
APEX1-205ENST00000553555 HIST2H2BEQ16778 126 aa10□□□□□ -0.81
APEX1-205ENST00000553555 HIST2H2BFQ5QNW6 126 aaPredicted RBP10□□□□□ -0.81
APEX1-205ENST00000553555 TMEM136Q6ZRR5 245 aa10□□□□□ -0.81
APEX1-205ENST00000553555 KIR2DL5AQ8N109 375 aa10□□□□□ -0.81
APEX1-205ENST00000553555 KIR2DL5BQ8NHK3 375 aa10□□□□□ -0.81
APEX1-205ENST00000553555 HIST1H2BHQ93079 126 aa10□□□□□ -0.81
APEX1-205ENST00000553555 HIST1H2BNQ99877 126 aa10□□□□□ -0.81
APEX1-205ENST00000553555 HIST1H2BMQ99879 126 aa10□□□□□ -0.81
APEX1-205ENST00000553555 TMEM208Q9BTX3 173 aa10□□□□□ -0.81
APEX1-205ENST00000553555 GNB1LQ9BYB4 327 aa10□□□□□ -0.81
APEX1-205ENST00000553555 MDFICQ9P1T7 246 aa10□□□□□ -0.81
APEX1-205ENST00000553555 NOTCH1P46531 2555 aa9.99□□□□□ -0.81
APEX1-205ENST00000553555 A0A1B0GW15 77 aa9.99□□□□□ -0.81
APEX1-205ENST00000553555 PRM2P04554 102 aa9.99□□□□□ -0.81
APEX1-205ENST00000553555 IGHV4-30-4P0DP06 118 aa9.99□□□□□ -0.81
APEX1-205ENST00000553555 HTN1P15515 57 aa9.99□□□□□ -0.81
APEX1-205ENST00000553555 NTF3P20783 257 aa9.99□□□□□ -0.81
APEX1-205ENST00000553555 SSTP61278 116 aa9.99□□□□□ -0.81
APEX1-205ENST00000553555 OR10AG1Q8NH19 301 aa9.99□□□□□ -0.81
APEX1-205ENST00000553555 GOLT1BQ9Y3E0 138 aa9.99□□□□□ -0.81
APEX1-205ENST00000553555 TIMM8BQ9Y5J9 83 aaPredicted RBP9.99□□□□□ -0.81
APEX1-205ENST00000553555 IGHV4-4A0A075B6R2 117 aa9.98□□□□□ -0.81
APEX1-205ENST00000553555 IGHV3OR16-12A0A075B7B8 117 aa9.98□□□□□ -0.81
APEX1-205ENST00000553555 SNURFLB1AK76 121 aa9.98□□□□□ -0.81
APEX1-205ENST00000553555 CACNG7P62955 275 aa9.98□□□□□ -0.81
APEX1-205ENST00000553555 KRTAP21-3Q3LHN1 58 aa9.98□□□□□ -0.81
APEX1-205ENST00000553555 C9orf85Q96MD7 179 aa9.98□□□□□ -0.81
APEX1-205ENST00000553555 MGAM2Q2M2H8 2515 aa9.98□□□□□ -0.81
APEX1-205ENST00000553555 PHOX2AO14813 284 aa9.97□□□□□ -0.81
APEX1-205ENST00000553555 SPRY2O43597 315 aa9.97□□□□□ -0.81
APEX1-205ENST00000553555 S100A8P05109 93 aa9.97□□□□□ -0.81
APEX1-205ENST00000553555 APOC4P55056 127 aa9.97□□□□□ -0.81
APEX1-205ENST00000553555 TWIST1Q15672 202 aa9.97□□□□□ -0.81
APEX1-205ENST00000553555 GATD1Q8NB37 220 aa9.97□□□□□ -0.81
APEX1-205ENST00000553555 MSRB1Q9NZV6 116 aa9.97□□□□□ -0.81
APEX1-205ENST00000553555 PHLDA3Q9Y5J5 127 aa9.97□□□□□ -0.81
APEX1-205ENST00000553555 NBEAL1Q6ZS30 2694 aa9.97□□□□□ -0.81
APEX1-205ENST00000553555 A8MZ25 164 aa9.96□□□□□ -0.81
APEX1-205ENST00000553555 MT-ND6P03923 174 aa9.96□□□□□ -0.81
APEX1-205ENST00000553555 AZU1P20160 251 aa9.96□□□□□ -0.81
APEX1-205ENST00000553555 SPANXN1Q5VSR9 72 aa9.96□□□□□ -0.81
APEX1-205ENST00000553555 ZNF705AQ6ZN79 300 aaPredicted RBP9.96□□□□□ -0.81
APEX1-205ENST00000553555 MRPL18Q9H0U6 180 aaKnown RBP9.96□□□□□ -0.81
APEX1-205ENST00000553555 C5orf52A6NGY3 159 aa9.96□□□□□ -0.82
APEX1-205ENST00000553555 HLA-DQA1P01909 254 aa9.96□□□□□ -0.82
APEX1-205ENST00000553555 AKR1D1P51857 326 aa9.96□□□□□ -0.82
APEX1-205ENST00000553555 ZNF493Q6ZR52 646 aa9.96□□□□□ -0.82
APEX1-205ENST00000553555 UBE2CO00762 179 aa9.95□□□□□ -0.82
APEX1-205ENST00000553555 ZNF415Q09FC8 603 aa9.95□□□□□ -0.82
APEX1-205ENST00000553555 KPRPQ5T749 579 aaPredicted RBP9.95□□□□□ -0.82
APEX1-205ENST00000553555 DMRTA1Q5VZB9 504 aa9.95□□□□□ -0.82
APEX1-205ENST00000553555 C11orf72Q8NBR9 251 aa9.95□□□□□ -0.82
APEX1-205ENST00000553555 M0R381 172 aa9.94□□□□□ -0.82
APEX1-205ENST00000553555 NXPH4O95158 308 aa9.94□□□□□ -0.82
APEX1-205ENST00000553555 GSN-AS1Q9NRJ2 163 aa9.94□□□□□ -0.82
APEX1-205ENST00000553555 APCSP02743 223 aa9.93□□□□□ -0.82
APEX1-205ENST00000553555 SLAQ13239 276 aa9.93□□□□□ -0.82
APEX1-205ENST00000553555 KIAA1644Q3SXP7 199 aa9.93□□□□□ -0.82
APEX1-205ENST00000553555 PDZD11Q5EBL8 140 aa9.93□□□□□ -0.82
APEX1-205ENST00000553555 TMEM191AQ9H0A3 160 aa9.93□□□□□ -0.82
APEX1-205ENST00000553555 RRN3P1Q2M238 152 aa9.93□□□□□ -0.82
APEX1-205ENST00000553555 RNASE8Q8TDE3 154 aaKnown RBP9.93□□□□□ -0.82
APEX1-205ENST00000553555 TMEM263Q8WUH6 116 aaKnown RBP9.93□□□□□ -0.82
APEX1-205ENST00000553555 RCHY1Q96PM5 261 aa9.93□□□□□ -0.82
APEX1-205ENST00000553555 SPXQ9BT56 116 aa9.93□□□□□ -0.82
APEX1-205ENST00000553555 NACAE9PAV3 2078 aa9.92□□□□□ -0.82
APEX1-205ENST00000553555 NBEAL2Q6ZNJ1 2754 aa9.92□□□□□ -0.82
APEX1-205ENST00000553555 S100A12P80511 92 aa9.92□□□□□ -0.82
APEX1-205ENST00000553555 FAM104BQ5XKR9 115 aa9.92□□□□□ -0.82
APEX1-205ENST00000553555 LINC00518Q8N0U6 118 aa9.92□□□□□ -0.82
APEX1-205ENST00000553555 SYT8Q8NBV8 401 aa9.92□□□□□ -0.82
APEX1-205ENST00000553555 IL17DQ8TAD2 202 aa9.92□□□□□ -0.82
APEX1-205ENST00000553555 PTH2Q96A98 100 aa9.92□□□□□ -0.82
APEX1-205ENST00000553555 M0R2P5 195 aa9.91□□□□□ -0.82
APEX1-205ENST00000553555 HOXA5P20719 270 aa9.91□□□□□ -0.82
APEX1-205ENST00000553555 EVI2AP22794 236 aa9.91□□□□□ -0.82
APEX1-205ENST00000553555 DEFB135Q30KP9 77 aa9.91□□□□□ -0.82
APEX1-205ENST00000553555 ZNF876PQ49A33 203 aa9.91□□□□□ -0.82
APEX1-205ENST00000553555 SMIM15Q7Z3B0 74 aa9.91□□□□□ -0.82
APEX1-205ENST00000553555 C16orf74Q96GX8 76 aa9.91□□□□□ -0.82
APEX1-205ENST00000553555 X6R8D5 127 aa9.91□□□□□ -0.82
APEX1-205ENST00000553555 SMIM9A6NGZ8 99 aa9.9□□□□□ -0.82
APEX1-205ENST00000553555 Q6ZWC4 215 aa9.9□□□□□ -0.82
APEX1-205ENST00000553555 AMN1Q8IY45 258 aa9.9□□□□□ -0.82
APEX1-205ENST00000553555 PLAC8L1A1L4L8 177 aa9.89□□□□□ -0.83
APEX1-205ENST00000553555 PRB2P02812 416 aaPredicted RBP9.89□□□□□ -0.83
APEX1-205ENST00000553555 RAB4AP20338 218 aa9.89□□□□□ -0.83
APEX1-205ENST00000553555 PIK3CD-AS1Q5SR53 167 aa9.89□□□□□ -0.83
APEX1-205ENST00000553555 RNF183Q96D59 192 aa9.89□□□□□ -0.83
APEX1-205ENST00000553555 RNF185Q96GF1 192 aa9.89□□□□□ -0.83
APEX1-205ENST00000553555 JPT2Q9H910 190 aa9.89□□□□□ -0.83
APEX1-205ENST00000553555 K7EIL1 84 aa9.89□□□□□ -0.83
APEX1-205ENST00000553555 DAZ2Q13117 558 aaKnown RBP9.89□□□□□ -0.83
APEX1-205ENST00000553555 C14orf178Q8N769 122 aaPredicted RBP9.89□□□□□ -0.83
APEX1-205ENST00000553555 AP1S3Q96PC3 154 aa9.89□□□□□ -0.83
APEX1-205ENST00000553555 DPH3P1Q9H4G8 78 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms