RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 KIR3DS1Q14943 382 aa6.2□□□□□ -1.42
RAB5B-210ENST00000553116 TMEM61Q8N0U2 210 aa6.2□□□□□ -1.42
RAB5B-210ENST00000553116 KCNS1Q96KK3 526 aa6.2□□□□□ -1.42
RAB5B-210ENST00000553116 TP53TG3Q9ULZ0 132 aa6.2□□□□□ -1.42
RAB5B-210ENST00000553116 LAMTOR2Q9Y2Q5 125 aa6.2□□□□□ -1.42
RAB5B-210ENST00000553116 C2CD3Q4AC94 2353 aa6.2□□□□□ -1.42
RAB5B-210ENST00000553116 CSN3P07498 182 aa6.2□□□□□ -1.42
RAB5B-210ENST00000553116 IGLC6P0CF74 106 aa6.2□□□□□ -1.42
RAB5B-210ENST00000553116 DEFB131AP59861 70 aa6.2□□□□□ -1.42
RAB5B-210ENST00000553116 UBE2V1Q13404 147 aa6.2□□□□□ -1.42
RAB5B-210ENST00000553116 SPANXN1Q5VSR9 72 aa6.2□□□□□ -1.42
RAB5B-210ENST00000553116 ADAMTSL5Q6ZMM2 481 aa6.2□□□□□ -1.42
RAB5B-210ENST00000553116 FN1P02751 2386 aaKnown RBP6.19□□□□□ -1.42
RAB5B-210ENST00000553116 SNAI2O43623 268 aa6.19□□□□□ -1.42
RAB5B-210ENST00000553116 AMN1Q8IY45 258 aa6.19□□□□□ -1.42
RAB5B-210ENST00000553116 CSTL1Q9H114 145 aa6.19□□□□□ -1.42
RAB5B-210ENST00000553116 CST9LQ9H4G1 147 aa6.19□□□□□ -1.42
RAB5B-210ENST00000553116 TRAV12-3A0A0B4J271 114 aa6.19□□□□□ -1.42
RAB5B-210ENST00000553116 A0A0J9YX75 114 aa6.19□□□□□ -1.42
RAB5B-210ENST00000553116 DUSP14O95147 198 aaKnown RBP6.19□□□□□ -1.42
RAB5B-210ENST00000553116 OCIAD2Q56VL3 154 aa6.19□□□□□ -1.42
RAB5B-210ENST00000553116 FAM159AQ6UWV7 190 aa6.19□□□□□ -1.42
RAB5B-210ENST00000553116 MCRIP2Q9BUT9 160 aaKnown RBP6.19□□□□□ -1.42
RAB5B-210ENST00000553116 JMJD1CQ15652 2540 aa6.19□□□□□ -1.42
RAB5B-210ENST00000553116 TRAV12-2A0A075B6T6 113 aa6.19□□□□□ -1.42
RAB5B-210ENST00000553116 M0R2Z0 102 aa6.19□□□□□ -1.42
RAB5B-210ENST00000553116 CIDEAO60543 219 aa6.19□□□□□ -1.42
RAB5B-210ENST00000553116 LEPP41159 167 aa6.19□□□□□ -1.42
RAB5B-210ENST00000553116 ASIPP42127 132 aa6.19□□□□□ -1.42
RAB5B-210ENST00000553116 SPINK13Q1W4C9 94 aa6.19□□□□□ -1.42
RAB5B-210ENST00000553116 CD300EQ496F6 205 aaPredicted RBP6.19□□□□□ -1.42
RAB5B-210ENST00000553116 F8P00451 2351 aa6.18□□□□□ -1.42
RAB5B-210ENST00000553116 NDUFA7O95182 113 aa6.18□□□□□ -1.42
RAB5B-210ENST00000553116 LINC00310P59036 64 aa6.18□□□□□ -1.42
RAB5B-210ENST00000553116 ANXA2RQ3ZCQ2 193 aa6.18□□□□□ -1.42
RAB5B-210ENST00000553116 AMMECR1LQ6DCA0 310 aa6.18□□□□□ -1.42
RAB5B-210ENST00000553116 OR10AG1Q8NH19 301 aa6.18□□□□□ -1.42
RAB5B-210ENST00000553116 MSRB1Q9NZV6 116 aa6.18□□□□□ -1.42
RAB5B-210ENST00000553116 PHLDA3Q9Y5J5 127 aa6.18□□□□□ -1.42
RAB5B-210ENST00000553116 TRBV7-9A0A0J9YWB2 115 aa6.18□□□□□ -1.42
RAB5B-210ENST00000553116 OR4C46A6NHA9 309 aa6.18□□□□□ -1.42
RAB5B-210ENST00000553116 KNCNA6PVL3 124 aa6.18□□□□□ -1.42
RAB5B-210ENST00000553116 D6R8Y8 96 aa6.18□□□□□ -1.42
RAB5B-210ENST00000553116 TSPOP30536 169 aa6.18□□□□□ -1.42
RAB5B-210ENST00000553116 FOXI2Q6ZQN5 318 aa6.18□□□□□ -1.42
RAB5B-210ENST00000553116 M0R381 172 aa6.17□□□□□ -1.42
RAB5B-210ENST00000553116 CKS2P33552 79 aa6.17□□□□□ -1.42
RAB5B-210ENST00000553116 FAM104BQ5XKR9 115 aa6.17□□□□□ -1.42
RAB5B-210ENST00000553116 NOTCH3Q9UM47 2321 aa6.17□□□□□ -1.42
RAB5B-210ENST00000553116 C7orf71A4D174 169 aa6.17□□□□□ -1.42
RAB5B-210ENST00000553116 ZNF324O75467 553 aaPredicted RBP6.17□□□□□ -1.42
RAB5B-210ENST00000553116 FXYD7P58549 80 aa6.17□□□□□ -1.42
RAB5B-210ENST00000553116 DEFB114Q30KQ6 69 aa6.17□□□□□ -1.42
RAB5B-210ENST00000553116 C4orf48Q5BLP8 95 aa6.17□□□□□ -1.42
RAB5B-210ENST00000553116 ZNF493Q6ZR52 646 aa6.17□□□□□ -1.42
RAB5B-210ENST00000553116 ORMDL3Q8N138 153 aa6.17□□□□□ -1.42
RAB5B-210ENST00000553116 LOC389332A0A1B0GUA5 103 aa6.17□□□□□ -1.42
RAB5B-210ENST00000553116 NCR2O95944 276 aa6.17□□□□□ -1.42
RAB5B-210ENST00000553116 CD7P09564 240 aa6.17□□□□□ -1.42
RAB5B-210ENST00000553116 PROK1P58294 105 aa6.17□□□□□ -1.42
RAB5B-210ENST00000553116 SMAGPQ0VAQ4 97 aa6.17□□□□□ -1.42
RAB5B-210ENST00000553116 FHL3Q13643 280 aa6.17□□□□□ -1.42
RAB5B-210ENST00000553116 NIT1Q86X76 327 aa6.17□□□□□ -1.42
RAB5B-210ENST00000553116 FAM19A4Q96LR4 140 aa6.17□□□□□ -1.42
RAB5B-210ENST00000553116 PRELID3AQ96N28 172 aa6.17□□□□□ -1.42
RAB5B-210ENST00000553116 COX11Q9Y6N1 276 aa6.17□□□□□ -1.42
RAB5B-210ENST00000553116 KLLNB2CW77 178 aa6.16□□□□□ -1.42
RAB5B-210ENST00000553116 SMKR1H3BMG3 65 aa6.16□□□□□ -1.42
RAB5B-210ENST00000553116 SPRY2O43597 315 aa6.16□□□□□ -1.42
RAB5B-210ENST00000553116 ESDP10768 282 aa6.16□□□□□ -1.42
RAB5B-210ENST00000553116 MRPL51Q4U2R6 128 aaKnown RBP6.16□□□□□ -1.42
RAB5B-210ENST00000553116 PRSS3P2Q8NHM4 247 aa6.16□□□□□ -1.42
RAB5B-210ENST00000553116 TMEM191AQ9H0A3 160 aa6.16□□□□□ -1.42
RAB5B-210ENST00000553116 GTSF1LQ9H1H1 148 aa6.16□□□□□ -1.42
RAB5B-210ENST00000553116 HSBP1L1C9JCN9 74 aa6.16□□□□□ -1.42
RAB5B-210ENST00000553116 GNRH2O43555 120 aa6.16□□□□□ -1.42
RAB5B-210ENST00000553116 OR5AL1P0C617 328 aa6.16□□□□□ -1.42
RAB5B-210ENST00000553116 CACNG7P62955 275 aa6.16□□□□□ -1.42
RAB5B-210ENST00000553116 PET117Q6UWS5 81 aa6.16□□□□□ -1.42
RAB5B-210ENST00000553116 FA2HQ7L5A8 372 aa6.16□□□□□ -1.42
RAB5B-210ENST00000553116 APRG1Q8IVJ8 170 aa6.16□□□□□ -1.42
RAB5B-210ENST00000553116 SPAG8Q99932 426 aaPredicted RBP6.16□□□□□ -1.42
RAB5B-210ENST00000553116 CNFNQ9BYD5 112 aa6.16□□□□□ -1.42
RAB5B-210ENST00000553116 HTN1P15515 57 aa6.15□□□□□ -1.42
RAB5B-210ENST00000553116 EVI2AP22794 236 aa6.15□□□□□ -1.42
RAB5B-210ENST00000553116 PMCHL1Q16048 86 aa6.15□□□□□ -1.42
RAB5B-210ENST00000553116 GATD1Q8NB37 220 aa6.15□□□□□ -1.42
RAB5B-210ENST00000553116 ODF3Q96PU9 254 aa6.15□□□□□ -1.42
RAB5B-210ENST00000553116 MAP6D1Q9H9H5 199 aa6.15□□□□□ -1.42
RAB5B-210ENST00000553116 MPV17L2Q567V2 206 aa6.15□□□□□ -1.42
RAB5B-210ENST00000553116 DNLZQ5SXM8 178 aa6.15□□□□□ -1.42
RAB5B-210ENST00000553116 ZNF575Q86XF7 245 aa6.15□□□□□ -1.42
RAB5B-210ENST00000553116 TRAV2A0A0B4J234 112 aa6.15□□□□□ -1.43
RAB5B-210ENST00000553116 PMCHL2Q9BQD1 86 aa6.15□□□□□ -1.43
RAB5B-210ENST00000553116 NIPBLQ6KC79 2804 aaeCLIP6.15□□□□□ -1.43
RAB5B-210ENST00000553116 HLA-DRB4P13762 266 aa6.14□□□□□ -1.43
RAB5B-210ENST00000553116 CITED1Q99966 193 aa6.14□□□□□ -1.43
RAB5B-210ENST00000553116 HLA-DRB4X5D2U9 266 aa6.14□□□□□ -1.43
RAB5B-210ENST00000553116 CRLF1O75462 422 aa6.14□□□□□ -1.43
RAB5B-210ENST00000553116 CHCHD1Q96BP2 118 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms