RNA–Protein interactions for RNA: ENST00000550678.1

LINC02388-201, Transcript of long intergenic non-protein coding RNA 2388, humanhuman

TSL 2 BASIC

Gene LINC02388, Length 1,975 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02388-201ENST00000550678 LINC01600Q96MT4 127 aa4.8□□□□□ -1.64
LINC02388-201ENST00000550678 HIST1H4GQ99525 98 aa4.8□□□□□ -1.64
LINC02388-201ENST00000550678 LINC00474Q9P2X8 69 aa4.8□□□□□ -1.64
LINC02388-201ENST00000550678 IGKV1OR2-108A0A075B7D4 117 aa4.79□□□□□ -1.64
LINC02388-201ENST00000550678 IGHV3-20A0A0C4DH32 117 aa4.79□□□□□ -1.64
LINC02388-201ENST00000550678 TMEM30CPA0ZSE6 113 aa4.79□□□□□ -1.64
LINC02388-201ENST00000550678 LINC01548A6NM66 108 aa4.79□□□□□ -1.64
LINC02388-201ENST00000550678 PSPHP1O15172 72 aa4.79□□□□□ -1.64
LINC02388-201ENST00000550678 ZNF56Q15929 161 aa4.79□□□□□ -1.64
LINC02388-201ENST00000550678 ZNF876PQ49A33 203 aa4.79□□□□□ -1.64
LINC02388-201ENST00000550678 C5orf38Q86SI9 138 aa4.79□□□□□ -1.64
LINC02388-201ENST00000550678 FAM218AQ96MZ4 157 aa4.79□□□□□ -1.64
LINC02388-201ENST00000550678 SLC25A15Q9Y619 301 aa4.79□□□□□ -1.64
LINC02388-201ENST00000550678 PLXNB1O43157 2135 aa4.79□□□□□ -1.64
LINC02388-201ENST00000550678 IGHV5-51A0A0C4DH38 117 aa4.78□□□□□ -1.64
LINC02388-201ENST00000550678 ARMS2P0C7Q2 107 aa4.78□□□□□ -1.64
LINC02388-201ENST00000550678 FXYD7P58549 80 aa4.78□□□□□ -1.64
LINC02388-201ENST00000550678 ZFP2Q6ZN57 461 aa4.78□□□□□ -1.64
LINC02388-201ENST00000550678 NKAPP1Q8N9T2 125 aa4.78□□□□□ -1.64
LINC02388-201ENST00000550678 RNASE6Q93091 150 aaKnown RBP4.78□□□□□ -1.64
LINC02388-201ENST00000550678 OPRPNQ99935 248 aaPredicted RBP4.78□□□□□ -1.64
LINC02388-201ENST00000550678 KRTAP9-2Q9BYQ4 174 aa4.78□□□□□ -1.64
LINC02388-201ENST00000550678 XCL2Q9UBD3 114 aa4.78□□□□□ -1.64
LINC02388-201ENST00000550678 COL5A1P20908 1838 aaPredicted RBP4.78□□□□□ -1.64
LINC02388-201ENST00000550678 PTPRSQ13332 1948 aa4.78□□□□□ -1.64
LINC02388-201ENST00000550678 KRTAP9-6A0A140TA67 174 aa4.78□□□□□ -1.64
LINC02388-201ENST00000550678 D6R8Y8 96 aa4.78□□□□□ -1.64
LINC02388-201ENST00000550678 IGHV3-9P01782 118 aa4.78□□□□□ -1.64
LINC02388-201ENST00000550678 CCKP06307 115 aa4.78□□□□□ -1.64
LINC02388-201ENST00000550678 SPINK2P20155 84 aa4.78□□□□□ -1.64
LINC02388-201ENST00000550678 FCER1GP30273 86 aa4.78□□□□□ -1.64
LINC02388-201ENST00000550678 UBE2BP63146 152 aa4.78□□□□□ -1.64
LINC02388-201ENST00000550678 RBM3P98179 157 aaKnown RBP4.78□□□□□ -1.64
LINC02388-201ENST00000550678 REG3AQ06141 175 aa4.78□□□□□ -1.64
LINC02388-201ENST00000550678 ZNF714Q96N38 554 aa4.78□□□□□ -1.64
LINC02388-201ENST00000550678 TMEM243Q9BU79 118 aa4.78□□□□□ -1.64
LINC02388-201ENST00000550678 ZNF407Q9C0G0 2248 aa4.78□□□□□ -1.64
LINC02388-201ENST00000550678 ARHGEF17Q96PE2 2063 aaPredicted RBP4.77□□□□□ -1.65
LINC02388-201ENST00000550678 IGHV1-69DA0A0B4J2H0 117 aa4.77□□□□□ -1.65
LINC02388-201ENST00000550678 MYMXA0A1B0GTQ4 84 aa4.77□□□□□ -1.65
LINC02388-201ENST00000550678 COX7A2P2O60397 106 aa4.77□□□□□ -1.65
LINC02388-201ENST00000550678 RNASE2P10153 161 aaKnown RBP4.77□□□□□ -1.65
LINC02388-201ENST00000550678 SYNJ2BPP57105 145 aa4.77□□□□□ -1.65
LINC02388-201ENST00000550678 UBE2D3P61077 147 aa4.77□□□□□ -1.65
LINC02388-201ENST00000550678 UBE2D2P62837 147 aa4.77□□□□□ -1.65
LINC02388-201ENST00000550678 PDPNQ86YL7 162 aa4.77□□□□□ -1.65
LINC02388-201ENST00000550678 Q8IYB0 196 aa4.77□□□□□ -1.65
LINC02388-201ENST00000550678 TRGV9Q99603 122 aa4.77□□□□□ -1.65
LINC02388-201ENST00000550678 SPRR3Q9UBC9 169 aa4.77□□□□□ -1.65
LINC02388-201ENST00000550678 PCSK5Q92824 1860 aa4.77□□□□□ -1.65
LINC02388-201ENST00000550678 LOC107984156A0A0G2JMH3 177 aa4.76□□□□□ -1.65
LINC02388-201ENST00000550678 ESPL1Q14674 2120 aa4.76□□□□□ -1.65
LINC02388-201ENST00000550678 TWIST1Q15672 202 aa4.76□□□□□ -1.65
LINC02388-201ENST00000550678 FBXL19-AS1Q494R0 122 aa4.76□□□□□ -1.65
LINC02388-201ENST00000550678 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.76□□□□□ -1.65
LINC02388-201ENST00000550678 C10orf113Q5VZT2 155 aa4.76□□□□□ -1.65
LINC02388-201ENST00000550678 GUSBP11Q6P575 273 aa4.76□□□□□ -1.65
LINC02388-201ENST00000550678 C7orf65Q6ZTY9 151 aa4.76□□□□□ -1.65
LINC02388-201ENST00000550678 ARL17AQ8IVW1 177 aa4.76□□□□□ -1.65
LINC02388-201ENST00000550678 ORMDL3Q8N138 153 aa4.76□□□□□ -1.65
LINC02388-201ENST00000550678 TMEM14BQ9NUH8 114 aa4.76□□□□□ -1.65
LINC02388-201ENST00000550678 NOTCH4Q99466 2003 aa4.76□□□□□ -1.65
LINC02388-201ENST00000550678 TMSB15BA0A087X1C1 80 aa4.76□□□□□ -1.65
LINC02388-201ENST00000550678 LINC01546A6NGU7 62 aa4.76□□□□□ -1.65
LINC02388-201ENST00000550678 LINC01549A6NIU2 74 aa4.76□□□□□ -1.65
LINC02388-201ENST00000550678 DEFB108AA8MXU0 73 aa4.76□□□□□ -1.65
LINC02388-201ENST00000550678 ZNHIT1O43257 154 aa4.76□□□□□ -1.65
LINC02388-201ENST00000550678 PROP1O75360 226 aa4.76□□□□□ -1.65
LINC02388-201ENST00000550678 CDK2AP2O75956 126 aa4.76□□□□□ -1.65
LINC02388-201ENST00000550678 NPYP01303 97 aa4.76□□□□□ -1.65
LINC02388-201ENST00000550678 PRSS1P07477 247 aa4.76□□□□□ -1.65
LINC02388-201ENST00000550678 RNASE1P07998 156 aaKnown RBP4.76□□□□□ -1.65
LINC02388-201ENST00000550678 GNLYP22749 145 aa4.76□□□□□ -1.65
LINC02388-201ENST00000550678 LINC01554Q52M75 96 aa4.76□□□□□ -1.65
LINC02388-201ENST00000550678 FAM104BQ5XKR9 115 aa4.76□□□□□ -1.65
LINC02388-201ENST00000550678 PATE2Q6UY27 113 aa4.76□□□□□ -1.65
LINC02388-201ENST00000550678 DIRC1Q969H9 104 aa4.76□□□□□ -1.65
LINC02388-201ENST00000550678 USF3Q68DE3 2245 aa4.76□□□□□ -1.65
LINC02388-201ENST00000550678 UNC13CQ8NB66 2214 aa4.76□□□□□ -1.65
LINC02388-201ENST00000550678 AGRNO00468 2067 aa4.76□□□□□ -1.65
LINC02388-201ENST00000550678 IGHV3-43A0A0B4J1X8 118 aa4.75□□□□□ -1.65
LINC02388-201ENST00000550678 H3BVH4 76 aa4.75□□□□□ -1.65
LINC02388-201ENST00000550678 IGHV3-43DP0DP04 118 aa4.75□□□□□ -1.65
LINC02388-201ENST00000550678 CCL5P13501 91 aa4.75□□□□□ -1.65
LINC02388-201ENST00000550678 ZFP36P26651 326 aaKnown RBP4.75□□□□□ -1.65
LINC02388-201ENST00000550678 CIRBPQ14011 172 aaKnown RBP4.75□□□□□ -1.65
LINC02388-201ENST00000550678 FHL2Q14192 279 aa4.75□□□□□ -1.65
LINC02388-201ENST00000550678 C2orf83Q53S99 150 aa4.75□□□□□ -1.65
LINC02388-201ENST00000550678 Q86TA4 180 aa4.75□□□□□ -1.65
LINC02388-201ENST00000550678 BRCA2P51587 3418 aa4.75□□□□□ -1.65
LINC02388-201ENST00000550678 HTTP42858 3142 aa4.75□□□□□ -1.65
LINC02388-201ENST00000550678 DIDO1Q9BTC0 2240 aaKnown RBP4.75□□□□□ -1.65
LINC02388-201ENST00000550678 RP1P56715 2156 aa4.75□□□□□ -1.65
LINC02388-201ENST00000550678 KRTAP4-8A0A0G2JLE6 195 aa4.74□□□□□ -1.65
LINC02388-201ENST00000550678 UBE2D1P51668 147 aa4.74□□□□□ -1.65
LINC02388-201ENST00000550678 ATP5EP56381 51 aaPredicted RBP4.74□□□□□ -1.65
LINC02388-201ENST00000550678 KIAA0087Q14695 138 aa4.74□□□□□ -1.65
LINC02388-201ENST00000550678 MRPL51Q4U2R6 128 aaKnown RBP4.74□□□□□ -1.65
LINC02388-201ENST00000550678 MDP1Q86V88 176 aa4.74□□□□□ -1.65
LINC02388-201ENST00000550678 TRAV40A0A0B4J280 105 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms