RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 NUP35Q8NFH5 326 aa4.5□□□□□ -1.69
DEPDC4-209ENST00000550587 EDA2RQ9HAV5 297 aa4.5□□□□□ -1.69
DEPDC4-209ENST00000550587 NAT8BQ9UHF3 227 aa4.5□□□□□ -1.69
DEPDC4-209ENST00000550587 TGIF2-C20orf24A0A0A6YYL0 155 aa4.49□□□□□ -1.69
DEPDC4-209ENST00000550587 A0A1W2PPQ1 181 aa4.49□□□□□ -1.69
DEPDC4-209ENST00000550587 C7orf71A4D174 169 aa4.49□□□□□ -1.69
DEPDC4-209ENST00000550587 HIGD1CA8MV81 97 aa4.49□□□□□ -1.69
DEPDC4-209ENST00000550587 M0R2Z0 102 aa4.49□□□□□ -1.69
DEPDC4-209ENST00000550587 CA1P00915 261 aaPredicted RBP4.49□□□□□ -1.69
DEPDC4-209ENST00000550587 AMBPP02760 352 aa4.49□□□□□ -1.69
DEPDC4-209ENST00000550587 TYMSP04818 313 aa4.49□□□□□ -1.69
DEPDC4-209ENST00000550587 CXCL1P09341 107 aa4.49□□□□□ -1.69
DEPDC4-209ENST00000550587 RAB5AP20339 215 aa4.49□□□□□ -1.69
DEPDC4-209ENST00000550587 NUTF2P61970 127 aaKnown RBP4.49□□□□□ -1.69
DEPDC4-209ENST00000550587 TDRG1Q3Y452 100 aa4.49□□□□□ -1.69
DEPDC4-209ENST00000550587 DNLZQ5SXM8 178 aa4.49□□□□□ -1.69
DEPDC4-209ENST00000550587 TRPT1Q86TN4 253 aaKnown RBP4.49□□□□□ -1.69
DEPDC4-209ENST00000550587 GTSF1Q8WW33 167 aa4.49□□□□□ -1.69
DEPDC4-209ENST00000550587 KCNS1Q96KK3 526 aa4.49□□□□□ -1.69
DEPDC4-209ENST00000550587 FAM210BQ96KR6 192 aa4.49□□□□□ -1.69
DEPDC4-209ENST00000550587 NEU1Q99519 415 aa4.49□□□□□ -1.69
DEPDC4-209ENST00000550587 C20orf144Q9BQM9 153 aa4.49□□□□□ -1.69
DEPDC4-209ENST00000550587 TMA7Q9Y2S6 64 aaKnown RBP4.49□□□□□ -1.69
DEPDC4-209ENST00000550587 STAB2Q8WWQ8 2551 aa4.48□□□□□ -1.69
DEPDC4-209ENST00000550587 TRAV12-3A0A0B4J271 114 aa4.48□□□□□ -1.69
DEPDC4-209ENST00000550587 IGKV3D-20A0A0C4DH25 116 aa4.48□□□□□ -1.69
DEPDC4-209ENST00000550587 RBMY1BA6NDE4 496 aaKnown RBP4.48□□□□□ -1.69
DEPDC4-209ENST00000550587 RBMY1EA6NEQ0 496 aaKnown RBP4.48□□□□□ -1.69
DEPDC4-209ENST00000550587 F2Z2F3 143 aa4.48□□□□□ -1.69
DEPDC4-209ENST00000550587 J3KRW8 73 aa4.48□□□□□ -1.69
DEPDC4-209ENST00000550587 CRXO43186 299 aaPredicted RBP4.48□□□□□ -1.69
DEPDC4-209ENST00000550587 RBMY1DP0C7P1 496 aaKnown RBP4.48□□□□□ -1.69
DEPDC4-209ENST00000550587 IGLC6P0CF74 106 aa4.48□□□□□ -1.69
DEPDC4-209ENST00000550587 GZMBP10144 247 aa4.48□□□□□ -1.69
DEPDC4-209ENST00000550587 TCL1AP56279 114 aa4.48□□□□□ -1.69
DEPDC4-209ENST00000550587 SPINK13Q1W4C9 94 aa4.48□□□□□ -1.69
DEPDC4-209ENST00000550587 COX19Q49B96 90 aa4.48□□□□□ -1.69
DEPDC4-209ENST00000550587 GFI1BQ5VTD9 330 aa4.48□□□□□ -1.69
DEPDC4-209ENST00000550587 WDR73Q6P4I2 378 aa4.48□□□□□ -1.69
DEPDC4-209ENST00000550587 MORN3Q6PF18 240 aaPredicted RBP4.48□□□□□ -1.69
DEPDC4-209ENST00000550587 RASL11AQ6T310 242 aa4.48□□□□□ -1.69
DEPDC4-209ENST00000550587 FAM159AQ6UWV7 190 aa4.48□□□□□ -1.69
DEPDC4-209ENST00000550587 Q6ZQT7 251 aa4.48□□□□□ -1.69
DEPDC4-209ENST00000550587 ATP5L2Q7Z4Y8 100 aa4.48□□□□□ -1.69
DEPDC4-209ENST00000550587 SRD5A3Q9H8P0 318 aa4.48□□□□□ -1.69
DEPDC4-209ENST00000550587 TENM2Q9NT68 2774 aa4.48□□□□□ -1.69
DEPDC4-209ENST00000550587 TRAV12-2A0A075B6T6 113 aa4.47□□□□□ -1.69
DEPDC4-209ENST00000550587 IGHV1OR15-1A0A075B7D0 117 aa4.47□□□□□ -1.69
DEPDC4-209ENST00000550587 TMSB15BA0A087X1C1 80 aa4.47□□□□□ -1.69
DEPDC4-209ENST00000550587 A0A1B0GUT8 65 aa4.47□□□□□ -1.69
DEPDC4-209ENST00000550587 A0A1B0GW15 77 aa4.47□□□□□ -1.69
DEPDC4-209ENST00000550587 OR5AL1P0C617 328 aa4.47□□□□□ -1.69
DEPDC4-209ENST00000550587 RPS10P46783 165 aaKnown RBP4.47□□□□□ -1.69
DEPDC4-209ENST00000550587 ANXA2RQ3ZCQ2 193 aa4.47□□□□□ -1.69
DEPDC4-209ENST00000550587 LYZL1Q6UWQ5 148 aa4.47□□□□□ -1.69
DEPDC4-209ENST00000550587 DEFB125Q8N687 156 aa4.47□□□□□ -1.69
DEPDC4-209ENST00000550587 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.47□□□□□ -1.69
DEPDC4-209ENST00000550587 FER1L6-AS1Q8NA97 138 aa4.47□□□□□ -1.69
DEPDC4-209ENST00000550587 NTN5Q8WTR8 489 aaPredicted RBP4.47□□□□□ -1.69
DEPDC4-209ENST00000550587 PGLYRP4Q96LB8 373 aa4.47□□□□□ -1.69
DEPDC4-209ENST00000550587 LINC00467Q9BRT7 94 aa4.47□□□□□ -1.69
DEPDC4-209ENST00000550587 C1QTNF4Q9BXJ3 329 aa4.47□□□□□ -1.69
DEPDC4-209ENST00000550587 GNB1LQ9BYB4 327 aa4.47□□□□□ -1.69
DEPDC4-209ENST00000550587 DNAH3Q8TD57 4116 aa4.46□□□□□ -1.69
DEPDC4-209ENST00000550587 IGHV4-4A0A075B6R2 117 aa4.46□□□□□ -1.7
DEPDC4-209ENST00000550587 A0A1B0GXF2 115 aa4.46□□□□□ -1.7
DEPDC4-209ENST00000550587 GRIFINA4D1Z8 144 aa4.46□□□□□ -1.7
DEPDC4-209ENST00000550587 NUPR2A6NF83 97 aa4.46□□□□□ -1.7
DEPDC4-209ENST00000550587 GNRH2O43555 120 aa4.46□□□□□ -1.7
DEPDC4-209ENST00000550587 SNAI2O43623 268 aa4.46□□□□□ -1.7
DEPDC4-209ENST00000550587 SPINK4O60575 86 aa4.46□□□□□ -1.7
DEPDC4-209ENST00000550587 LY6G6CO95867 125 aa4.46□□□□□ -1.7
DEPDC4-209ENST00000550587 INSP01308 110 aa4.46□□□□□ -1.7
DEPDC4-209ENST00000550587 GIG44P09565 113 aaPredicted RBP4.46□□□□□ -1.7
DEPDC4-209ENST00000550587 CTRLP40313 264 aa4.46□□□□□ -1.7
DEPDC4-209ENST00000550587 ASIPP42127 132 aa4.46□□□□□ -1.7
DEPDC4-209ENST00000550587 FXYD7P58549 80 aa4.46□□□□□ -1.7
DEPDC4-209ENST00000550587 RIGQ13278 110 aa4.46□□□□□ -1.7
DEPDC4-209ENST00000550587 MUC21Q5SSG8 566 aa4.46□□□□□ -1.7
DEPDC4-209ENST00000550587 TMEM256Q8N2U0 113 aa4.46□□□□□ -1.7
DEPDC4-209ENST00000550587 BORCS7Q96B45 105 aa4.46□□□□□ -1.7
DEPDC4-209ENST00000550587 CNFNQ9BYD5 112 aa4.46□□□□□ -1.7
DEPDC4-209ENST00000550587 CSTL1Q9H114 145 aa4.46□□□□□ -1.7
DEPDC4-209ENST00000550587 WFDC10AQ9H1F0 79 aa4.46□□□□□ -1.7
DEPDC4-209ENST00000550587 XCL2Q9UBD3 114 aa4.46□□□□□ -1.7
DEPDC4-209ENST00000550587 NAGKQ9UJ70 344 aa4.46□□□□□ -1.7
DEPDC4-209ENST00000550587 TP53TG3Q9ULZ0 132 aa4.46□□□□□ -1.7
DEPDC4-209ENST00000550587 KLK5Q9Y337 293 aaPredicted RBP4.46□□□□□ -1.7
DEPDC4-209ENST00000550587 RYR2Q92736 4967 aa4.45□□□□□ -1.7
DEPDC4-209ENST00000550587 KIR2DL5BA0A0G2JN68 375 aa4.45□□□□□ -1.7
DEPDC4-209ENST00000550587 KIR2DL5BA0A0G2JPC4 375 aa4.45□□□□□ -1.7
DEPDC4-209ENST00000550587 C1orf196B1AJZ1 125 aa4.45□□□□□ -1.7
DEPDC4-209ENST00000550587 HLA-DQA1P01909 254 aa4.45□□□□□ -1.7
DEPDC4-209ENST00000550587 MT-ND6P03923 174 aa4.45□□□□□ -1.7
DEPDC4-209ENST00000550587 S100A8P05109 93 aa4.45□□□□□ -1.7
DEPDC4-209ENST00000550587 ARMS2P0C7Q2 107 aa4.45□□□□□ -1.7
DEPDC4-209ENST00000550587 RBMY1A1P0DJD3 496 aaKnown RBP4.45□□□□□ -1.7
DEPDC4-209ENST00000550587 RBMY1CP0DJD4 496 aa4.45□□□□□ -1.7
DEPDC4-209ENST00000550587 RNASE3P12724 160 aaKnown RBP4.45□□□□□ -1.7
DEPDC4-209ENST00000550587 RPL35AP18077 110 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms