RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 PTH2Q96A98 100 aa11.88□□□□□ -0.51
CHMP1A-208ENST00000550102 DNAH2Q9P225 4427 aa11.88□□□□□ -0.51
CHMP1A-208ENST00000550102 K7EQD1 137 aa11.87□□□□□ -0.51
CHMP1A-208ENST00000550102 M0R036 132 aa11.87□□□□□ -0.51
CHMP1A-208ENST00000550102 CIDEAO60543 219 aa11.87□□□□□ -0.51
CHMP1A-208ENST00000550102 SULT1A2P50226 295 aa11.87□□□□□ -0.51
CHMP1A-208ENST00000550102 CFAP126Q5VTH2 177 aa11.87□□□□□ -0.51
CHMP1A-208ENST00000550102 C6orf223Q8N319 242 aa11.87□□□□□ -0.51
CHMP1A-208ENST00000550102 GNG13Q9P2W3 67 aa11.87□□□□□ -0.51
CHMP1A-208ENST00000550102 PGPEP1LA6NFU8 196 aa11.86□□□□□ -0.51
CHMP1A-208ENST00000550102 KRBOX1C9JBD0 128 aa11.86□□□□□ -0.51
CHMP1A-208ENST00000550102 RS1O15537 224 aa11.86□□□□□ -0.51
CHMP1A-208ENST00000550102 NXPH4O95158 308 aa11.86□□□□□ -0.51
CHMP1A-208ENST00000550102 GATA1P15976 413 aaPredicted RBP11.86□□□□□ -0.51
CHMP1A-208ENST00000550102 CRIP1P50238 77 aa11.86□□□□□ -0.51
CHMP1A-208ENST00000550102 ZNF674Q2M3X9 581 aa11.86□□□□□ -0.51
CHMP1A-208ENST00000550102 TXNDC17Q9BRA2 123 aa11.86□□□□□ -0.51
CHMP1A-208ENST00000550102 IL36BQ9NZH7 164 aa11.86□□□□□ -0.51
CHMP1A-208ENST00000550102 FAT2Q9NYQ8 4349 aa11.85□□□□□ -0.51
CHMP1A-208ENST00000550102 DNAH17Q9UFH2 4485 aa11.85□□□□□ -0.51
CHMP1A-208ENST00000550102 A0A1W2PPQ1 181 aa11.85□□□□□ -0.51
CHMP1A-208ENST00000550102 H3BVH4 76 aa11.85□□□□□ -0.51
CHMP1A-208ENST00000550102 PIK3CD-AS1Q5SR53 167 aa11.85□□□□□ -0.51
CHMP1A-208ENST00000550102 NHLRC2Q8NBF2 726 aa11.85□□□□□ -0.51
CHMP1A-208ENST00000550102 A0A1B0GVY2 172 aa11.84□□□□□ -0.51
CHMP1A-208ENST00000550102 CCL20P78556 96 aa11.84□□□□□ -0.51
CHMP1A-208ENST00000550102 LINC01559Q495D7 138 aa11.84□□□□□ -0.51
CHMP1A-208ENST00000550102 DNLZQ5SXM8 178 aa11.84□□□□□ -0.51
CHMP1A-208ENST00000550102 SH2D6Q7Z4S9 175 aa11.84□□□□□ -0.51
CHMP1A-208ENST00000550102 C9orf62Q8N4C0 152 aa11.84□□□□□ -0.51
CHMP1A-208ENST00000550102 KRTAP1-5Q9BYS1 174 aa11.84□□□□□ -0.51
CHMP1A-208ENST00000550102 A8MWV9 139 aa11.83□□□□□ -0.52
CHMP1A-208ENST00000550102 SIVA1O15304 175 aa11.83□□□□□ -0.52
CHMP1A-208ENST00000550102 RHOHQ15669 191 aa11.83□□□□□ -0.52
CHMP1A-208ENST00000550102 LYPD5Q6UWN5 251 aa11.83□□□□□ -0.52
CHMP1A-208ENST00000550102 SYT8Q8NBV8 401 aa11.83□□□□□ -0.52
CHMP1A-208ENST00000550102 C11orf52Q96A22 123 aa11.83□□□□□ -0.52
CHMP1A-208ENST00000550102 IGHV3-73A0A0B4J1V6 119 aa11.82□□□□□ -0.52
CHMP1A-208ENST00000550102 LOC100131303A0A0U1RQF7 123 aa11.82□□□□□ -0.52
CHMP1A-208ENST00000550102 IFNA1P01562 189 aa11.82□□□□□ -0.52
CHMP1A-208ENST00000550102 MGST1P10620 155 aaKnown RBP11.82□□□□□ -0.52
CHMP1A-208ENST00000550102 BAGE2Q86Y30 109 aa11.82□□□□□ -0.52
CHMP1A-208ENST00000550102 SLC25A29Q8N8R3 303 aa11.82□□□□□ -0.52
CHMP1A-208ENST00000550102 PRADC1Q9BSG0 188 aa11.82□□□□□ -0.52
CHMP1A-208ENST00000550102 PARLQ9H300 379 aa11.82□□□□□ -0.52
CHMP1A-208ENST00000550102 TMSB15BA0A087X1C1 80 aa11.81□□□□□ -0.52
CHMP1A-208ENST00000550102 TRBV6-4A0A1B0GX49 114 aa11.81□□□□□ -0.52
CHMP1A-208ENST00000550102 GRIFINA4D1Z8 144 aa11.81□□□□□ -0.52
CHMP1A-208ENST00000550102 ARMS2P0C7Q2 107 aa11.81□□□□□ -0.52
CHMP1A-208ENST00000550102 RPL35P42766 123 aaKnown RBP11.81□□□□□ -0.52
CHMP1A-208ENST00000550102 MLST8Q9BVC4 326 aa11.81□□□□□ -0.52
CHMP1A-208ENST00000550102 PKHD1P08F94 4074 aa11.8□□□□□ -0.52
CHMP1A-208ENST00000550102 BTF3P20290 206 aaKnown RBP11.8□□□□□ -0.52
CHMP1A-208ENST00000550102 MEF2BQ02080 365 aaPredicted RBP11.8□□□□□ -0.52
CHMP1A-208ENST00000550102 ZFP2Q6ZN57 461 aa11.8□□□□□ -0.52
CHMP1A-208ENST00000550102 DERL1Q9BUN8 251 aa11.8□□□□□ -0.52
CHMP1A-208ENST00000550102 PHLDA3Q9Y5J5 127 aa11.8□□□□□ -0.52
CHMP1A-208ENST00000550102 RHODO00212 210 aa11.79□□□□□ -0.52
CHMP1A-208ENST00000550102 PDE6DO43924 150 aa11.79□□□□□ -0.52
CHMP1A-208ENST00000550102 BCL2P10415 239 aa11.79□□□□□ -0.52
CHMP1A-208ENST00000550102 CXCL1P09341 107 aa11.78□□□□□ -0.52
CHMP1A-208ENST00000550102 MED14OSP0DP75 135 aa11.78□□□□□ -0.52
CHMP1A-208ENST00000550102 TIRAPP58753 221 aa11.78□□□□□ -0.52
CHMP1A-208ENST00000550102 TNP2Q05952 138 aa11.78□□□□□ -0.52
CHMP1A-208ENST00000550102 CENPWQ5EE01 88 aa11.78□□□□□ -0.52
CHMP1A-208ENST00000550102 PRR27Q6MZM9 219 aa11.78□□□□□ -0.52
CHMP1A-208ENST00000550102 ZFP82Q8N141 532 aa11.78□□□□□ -0.52
CHMP1A-208ENST00000550102 SCRT2Q9NQ03 307 aa11.78□□□□□ -0.52
CHMP1A-208ENST00000550102 PKD1P98161 4303 aa11.78□□□□□ -0.52
CHMP1A-208ENST00000550102 M0R381 172 aa11.77□□□□□ -0.53
CHMP1A-208ENST00000550102 TAGLN2P37802 199 aaKnown RBP11.77□□□□□ -0.53
CHMP1A-208ENST00000550102 DMRTA1Q5VZB9 504 aa11.77□□□□□ -0.53
CHMP1A-208ENST00000550102 WFDC10BQ8IUB3 73 aa11.77□□□□□ -0.53
CHMP1A-208ENST00000550102 LY96Q9Y6Y9 160 aa11.77□□□□□ -0.53
CHMP1A-208ENST00000550102 LINC00315P59091 139 aa11.76□□□□□ -0.53
CHMP1A-208ENST00000550102 RPL19P84098 196 aaKnown RBP11.76□□□□□ -0.53
CHMP1A-208ENST00000550102 UFSP1Q6NVU6 142 aa11.76□□□□□ -0.53
CHMP1A-208ENST00000550102 ALKAL2Q6UX46 152 aa11.76□□□□□ -0.53
CHMP1A-208ENST00000550102 ZNF575Q86XF7 245 aa11.76□□□□□ -0.53
CHMP1A-208ENST00000550102 JPT2Q9H910 190 aa11.76□□□□□ -0.53
CHMP1A-208ENST00000550102 VAX2Q9UIW0 290 aa11.76□□□□□ -0.53
CHMP1A-208ENST00000550102 TRAV9-2A0A087WT02 112 aa11.75□□□□□ -0.53
CHMP1A-208ENST00000550102 GNG4P50150 75 aa11.75□□□□□ -0.53
CHMP1A-208ENST00000550102 FAM74A4Q5TZK3 123 aa11.75□□□□□ -0.53
CHMP1A-208ENST00000550102 SMIM12Q96EX1 92 aa11.75□□□□□ -0.53
CHMP1A-208ENST00000550102 SFRP2Q96HF1 295 aa11.75□□□□□ -0.53
CHMP1A-208ENST00000550102 SAMD10Q9BYL1 202 aa11.75□□□□□ -0.53
CHMP1A-208ENST00000550102 A0A1B0GVG6 124 aa11.74□□□□□ -0.53
CHMP1A-208ENST00000550102 K7EP13 123 aa11.74□□□□□ -0.53
CHMP1A-208ENST00000550102 DNAH10OSP0CZ25 163 aa11.74□□□□□ -0.53
CHMP1A-208ENST00000550102 EVI2AP22794 236 aa11.74□□□□□ -0.53
CHMP1A-208ENST00000550102 Q6ZSN1 163 aa11.74□□□□□ -0.53
CHMP1A-208ENST00000550102 A0A087WWL8 130 aa11.73□□□□□ -0.53
CHMP1A-208ENST00000550102 ATP6V0E2Q8NHE4 81 aa11.73□□□□□ -0.53
CHMP1A-208ENST00000550102 MED9Q9NWA0 146 aa11.73□□□□□ -0.53
CHMP1A-208ENST00000550102 BOLA1Q9Y3E2 137 aa11.73□□□□□ -0.53
CHMP1A-208ENST00000550102 TRAV8-6A0A0B4J262 113 aa11.72□□□□□ -0.53
CHMP1A-208ENST00000550102 LINC00694P0DN24 101 aa11.72□□□□□ -0.53
CHMP1A-208ENST00000550102 NKX2-5P52952 324 aaPredicted RBP11.72□□□□□ -0.53
CHMP1A-208ENST00000550102 BLOC1S1P78537 153 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms