RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 LINC01556Q5JQF7 62 aa9.7□□□□□ -0.86
COL2A1-209ENST00000546974 RPL7L1Q6DKI1 246 aaKnown RBP9.7□□□□□ -0.86
COL2A1-209ENST00000546974 TRAV8-6A0A0B4J262 113 aa9.69□□□□□ -0.86
COL2A1-209ENST00000546974 CTXND1A0A1B0GTU2 59 aa9.69□□□□□ -0.86
COL2A1-209ENST00000546974 ZNF506Q5JVG8 444 aa9.69□□□□□ -0.86
COL2A1-209ENST00000546974 FXYD6-FXYD2A0A087WZ82 144 aa9.68□□□□□ -0.86
COL2A1-209ENST00000546974 IGHV3-73A0A0B4J1V6 119 aa9.68□□□□□ -0.86
COL2A1-209ENST00000546974 MGST1P10620 155 aaKnown RBP9.68□□□□□ -0.86
COL2A1-209ENST00000546974 ZNF726P1Q15940 193 aa9.68□□□□□ -0.86
COL2A1-209ENST00000546974 LINC00479Q96M42 142 aa9.68□□□□□ -0.86
COL2A1-209ENST00000546974 TRAV34A0A0B4J273 112 aa9.67□□□□□ -0.86
COL2A1-209ENST00000546974 IGKV3D-20A0A0C4DH25 116 aa9.67□□□□□ -0.86
COL2A1-209ENST00000546974 FABP5P3A8MUU1 101 aa9.67□□□□□ -0.86
COL2A1-209ENST00000546974 IBA57-AS1B1ANH7 110 aa9.67□□□□□ -0.86
COL2A1-209ENST00000546974 IFNA7P01567 189 aa9.67□□□□□ -0.86
COL2A1-209ENST00000546974 OR10J3Q5JRS4 329 aa9.67□□□□□ -0.86
COL2A1-209ENST00000546974 PIK3CD-AS1Q5SR53 167 aa9.67□□□□□ -0.86
COL2A1-209ENST00000546974 LELP1Q5T871 98 aa9.67□□□□□ -0.86
COL2A1-209ENST00000546974 NKX6-2Q9C056 277 aaPredicted RBP9.67□□□□□ -0.86
COL2A1-209ENST00000546974 GTSF1LQ9H1H1 148 aa9.67□□□□□ -0.86
COL2A1-209ENST00000546974 ARL2-SNX15V9GYD0 113 aa9.67□□□□□ -0.86
COL2A1-209ENST00000546974 A8MWV9 139 aa9.66□□□□□ -0.86
COL2A1-209ENST00000546974 PEX7O00628 323 aa9.66□□□□□ -0.86
COL2A1-209ENST00000546974 S100A4P26447 101 aaKnown RBP9.66□□□□□ -0.86
COL2A1-209ENST00000546974 XGP55808 180 aa9.66□□□□□ -0.86
COL2A1-209ENST00000546974 UBE2G2P60604 165 aa9.66□□□□□ -0.86
COL2A1-209ENST00000546974 AKR1C8PQ5T2L2 129 aa9.66□□□□□ -0.86
COL2A1-209ENST00000546974 ZFP2Q6ZN57 461 aa9.66□□□□□ -0.86
COL2A1-209ENST00000546974 Q6ZNX1 250 aa9.66□□□□□ -0.86
COL2A1-209ENST00000546974 OR2T35Q8NGX2 323 aa9.66□□□□□ -0.86
COL2A1-209ENST00000546974 ATP6V0E2Q8NHE4 81 aa9.66□□□□□ -0.86
COL2A1-209ENST00000546974 HIST1H2BAQ96A08 127 aa9.66□□□□□ -0.86
COL2A1-209ENST00000546974 FAM74A7A6NL05 159 aa9.65□□□□□ -0.86
COL2A1-209ENST00000546974 EPM2AB3EWF7 344 aa9.65□□□□□ -0.86
COL2A1-209ENST00000546974 PSCAO43653 123 aa9.65□□□□□ -0.86
COL2A1-209ENST00000546974 KRTAP10-1P60331 282 aa9.65□□□□□ -0.86
COL2A1-209ENST00000546974 PARLQ9H300 379 aa9.65□□□□□ -0.86
COL2A1-209ENST00000546974 LRCOL1A6NCL2 159 aa9.64□□□□□ -0.87
COL2A1-209ENST00000546974 GCSHP23434 173 aa9.64□□□□□ -0.87
COL2A1-209ENST00000546974 ASIPP42127 132 aa9.64□□□□□ -0.87
COL2A1-209ENST00000546974 FGF8P55075 233 aaPredicted RBP9.64□□□□□ -0.87
COL2A1-209ENST00000546974 LGALSLQ3ZCW2 172 aaPredicted RBP9.64□□□□□ -0.87
COL2A1-209ENST00000546974 Q6ZSN1 163 aa9.64□□□□□ -0.87
COL2A1-209ENST00000546974 COX8CQ7Z4L0 72 aa9.64□□□□□ -0.87
COL2A1-209ENST00000546974 Q86TA4 180 aa9.64□□□□□ -0.87
COL2A1-209ENST00000546974 IL36BQ9NZH7 164 aa9.64□□□□□ -0.87
COL2A1-209ENST00000546974 B4DEV8 164 aa9.63□□□□□ -0.87
COL2A1-209ENST00000546974 G3V3Q6 166 aa9.63□□□□□ -0.87
COL2A1-209ENST00000546974 DNLZQ5SXM8 178 aa9.63□□□□□ -0.87
COL2A1-209ENST00000546974 NTN5Q8WTR8 489 aaPredicted RBP9.63□□□□□ -0.87
COL2A1-209ENST00000546974 ZFP30Q9Y2G7 519 aa9.63□□□□□ -0.87
COL2A1-209ENST00000546974 HERC1Q15751 4861 aa9.62□□□□□ -0.87
COL2A1-209ENST00000546974 MAP1LC3B2A6NCE7 125 aa9.62□□□□□ -0.87
COL2A1-209ENST00000546974 KRBOX1C9JBD0 128 aa9.62□□□□□ -0.87
COL2A1-209ENST00000546974 IGHV3-30P01768 117 aa9.62□□□□□ -0.87
COL2A1-209ENST00000546974 IGHV3-33P01772 117 aa9.62□□□□□ -0.87
COL2A1-209ENST00000546974 LINC00694P0DN24 101 aa9.62□□□□□ -0.87
COL2A1-209ENST00000546974 IGHV3-30-3P0DP02 117 aa9.62□□□□□ -0.87
COL2A1-209ENST00000546974 IGHV3-30-5P0DP03 117 aa9.62□□□□□ -0.87
COL2A1-209ENST00000546974 CRIP1P50238 77 aa9.62□□□□□ -0.87
COL2A1-209ENST00000546974 LAGE3Q14657 143 aa9.62□□□□□ -0.87
COL2A1-209ENST00000546974 UFSP1Q6NVU6 142 aa9.62□□□□□ -0.87
COL2A1-209ENST00000546974 ZC2HC1AQ96GY0 325 aa9.62□□□□□ -0.87
COL2A1-209ENST00000546974 MAP1LC3BQ9GZQ8 125 aa9.62□□□□□ -0.87
COL2A1-209ENST00000546974 CYTL1Q9NRR1 136 aa9.62□□□□□ -0.87
COL2A1-209ENST00000546974 GAGE12JA6NER3 117 aa9.61□□□□□ -0.87
COL2A1-209ENST00000546974 GAGE1Q13065 139 aa9.61□□□□□ -0.87
COL2A1-209ENST00000546974 GAGE4Q13068 117 aa9.61□□□□□ -0.87
COL2A1-209ENST00000546974 GAGE5Q13069 117 aa9.61□□□□□ -0.87
COL2A1-209ENST00000546974 GAGE13Q4V321 117 aa9.61□□□□□ -0.87
COL2A1-209ENST00000546974 DMRTA1Q5VZB9 504 aa9.61□□□□□ -0.87
COL2A1-209ENST00000546974 SYT8Q8NBV8 401 aa9.61□□□□□ -0.87
COL2A1-209ENST00000546974 FMC1Q96HJ9 113 aa9.61□□□□□ -0.87
COL2A1-209ENST00000546974 TCEAL7Q9BRU2 100 aa9.61□□□□□ -0.87
COL2A1-209ENST00000546974 JPT2Q9H910 190 aa9.61□□□□□ -0.87
COL2A1-209ENST00000546974 Q9HAA7 133 aa9.61□□□□□ -0.87
COL2A1-209ENST00000546974 IGLV5-52A0A0A0MRZ9 124 aa9.6□□□□□ -0.87
COL2A1-209ENST00000546974 TRBV6-1A0A0K0K1D8 114 aa9.6□□□□□ -0.87
COL2A1-209ENST00000546974 H3BVH4 76 aa9.6□□□□□ -0.87
COL2A1-209ENST00000546974 ARPC5O15511 151 aa9.6□□□□□ -0.87
COL2A1-209ENST00000546974 SH2D1AO60880 128 aa9.6□□□□□ -0.87
COL2A1-209ENST00000546974 ARMS2P0C7Q2 107 aa9.6□□□□□ -0.87
COL2A1-209ENST00000546974 FHITP49789 147 aa9.6□□□□□ -0.87
COL2A1-209ENST00000546974 UBE2G1P62253 170 aa9.6□□□□□ -0.87
COL2A1-209ENST00000546974 FAM162BQ5T6X4 162 aa9.6□□□□□ -0.87
COL2A1-209ENST00000546974 Q8N814 137 aa9.6□□□□□ -0.87
COL2A1-209ENST00000546974 STOML3Q8TAV4 291 aa9.6□□□□□ -0.87
COL2A1-209ENST00000546974 TM2D2Q9BX73 214 aa9.6□□□□□ -0.87
COL2A1-209ENST00000546974 SAMD10Q9BYL1 202 aa9.6□□□□□ -0.87
COL2A1-209ENST00000546974 RHODO00212 210 aa9.59□□□□□ -0.87
COL2A1-209ENST00000546974 ZNF674Q2M3X9 581 aa9.59□□□□□ -0.87
COL2A1-209ENST00000546974 C14orf178Q8N769 122 aaPredicted RBP9.59□□□□□ -0.87
COL2A1-209ENST00000546974 OR11H4Q8NGC9 324 aa9.59□□□□□ -0.87
COL2A1-209ENST00000546974 FRZBQ92765 325 aa9.59□□□□□ -0.87
COL2A1-209ENST00000546974 MYCBP2O75592 4640 aa9.58□□□□□ -0.88
COL2A1-209ENST00000546974 A0A087WWC5 75 aa9.58□□□□□ -0.88
COL2A1-209ENST00000546974 GRIFINA4D1Z8 144 aa9.58□□□□□ -0.88
COL2A1-209ENST00000546974 M0R036 132 aa9.58□□□□□ -0.88
COL2A1-209ENST00000546974 LINC01559Q495D7 138 aa9.58□□□□□ -0.88
COL2A1-209ENST00000546974 Q5VSD8 79 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms