RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 IGHV4-38-2P0DP08 117 aa9.69□□□□□ -0.86
COL4A6-209ENST00000545689 CGB3P0DN86 165 aa9.69□□□□□ -0.86
COL4A6-209ENST00000545689 CGB7P0DN87 165 aa9.69□□□□□ -0.86
COL4A6-209ENST00000545689 TRAV25A0A0B4J276 109 aa9.69□□□□□ -0.86
COL4A6-209ENST00000545689 ACYP1P07311 99 aa9.69□□□□□ -0.86
COL4A6-209ENST00000545689 GATA1P15976 413 aaPredicted RBP9.69□□□□□ -0.86
COL4A6-209ENST00000545689 TIMM17AQ99595 171 aa9.69□□□□□ -0.86
COL4A6-209ENST00000545689 K7EQD1 137 aa9.68□□□□□ -0.86
COL4A6-209ENST00000545689 C9orf153Q5TBE3 101 aa9.68□□□□□ -0.86
COL4A6-209ENST00000545689 NCKAP5O14513 1909 aa9.68□□□□□ -0.86
COL4A6-209ENST00000545689 IGLL5B9A064 214 aa9.68□□□□□ -0.86
COL4A6-209ENST00000545689 RPL39LQ96EH5 51 aaKnown RBP9.68□□□□□ -0.86
COL4A6-209ENST00000545689 SH2D6Q7Z4S9 175 aa9.68□□□□□ -0.86
COL4A6-209ENST00000545689 NOP10Q9NPE3 64 aaKnown RBP9.68□□□□□ -0.86
COL4A6-209ENST00000545689 RTTNQ86VV8 2226 aa9.68□□□□□ -0.86
COL4A6-209ENST00000545689 IGHV4-30-2A0A087WSY4 118 aa9.67□□□□□ -0.86
COL4A6-209ENST00000545689 CRIP3Q6Q6R5 217 aa9.67□□□□□ -0.86
COL4A6-209ENST00000545689 IGHG2P01859 326 aa9.67□□□□□ -0.86
COL4A6-209ENST00000545689 EIF4EBP1Q13541 118 aaPredicted RBP9.67□□□□□ -0.86
COL4A6-209ENST00000545689 RBMY1FQ15415 496 aaKnown RBP9.67□□□□□ -0.86
COL4A6-209ENST00000545689 CRLF1O75462 422 aa9.67□□□□□ -0.86
COL4A6-209ENST00000545689 ANKRD39Q53RE8 183 aa9.67□□□□□ -0.86
COL4A6-209ENST00000545689 Q9H8V8 135 aa9.67□□□□□ -0.86
COL4A6-209ENST00000545689 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.66□□□□□ -0.86
COL4A6-209ENST00000545689 IGKV2-29A2NJV5 120 aaPredicted RBP9.66□□□□□ -0.86
COL4A6-209ENST00000545689 MSMPQ1L6U9 139 aa9.66□□□□□ -0.86
COL4A6-209ENST00000545689 IGKV1D-37A0A075B6S9 117 aa9.66□□□□□ -0.86
COL4A6-209ENST00000545689 ANGP03950 147 aaKnown RBP9.66□□□□□ -0.86
COL4A6-209ENST00000545689 LINC00173Q6ZV60 143 aa9.66□□□□□ -0.86
COL4A6-209ENST00000545689 DSCR8Q96T75 97 aa9.66□□□□□ -0.86
COL4A6-209ENST00000545689 ODF3BA8MYP8 253 aa9.66□□□□□ -0.86
COL4A6-209ENST00000545689 C9orf66Q5T8R8 295 aa9.66□□□□□ -0.86
COL4A6-209ENST00000545689 MSRB1Q9NZV6 116 aa9.66□□□□□ -0.86
COL4A6-209ENST00000545689 A0A1B0GXF2 115 aa9.66□□□□□ -0.86
COL4A6-209ENST00000545689 ZNF503Q96F45 646 aa9.65□□□□□ -0.86
COL4A6-209ENST00000545689 CITED1Q99966 193 aa9.65□□□□□ -0.86
COL4A6-209ENST00000545689 MRPL36Q9P0J6 103 aaKnown RBP9.65□□□□□ -0.86
COL4A6-209ENST00000545689 E7EUB6 86 aa9.65□□□□□ -0.86
COL4A6-209ENST00000545689 C11orf86A6NJI1 115 aa9.65□□□□□ -0.86
COL4A6-209ENST00000545689 SPATA12Q7Z6I5 190 aa9.65□□□□□ -0.86
COL4A6-209ENST00000545689 PRAC2D3DTV9 90 aa9.65□□□□□ -0.86
COL4A6-209ENST00000545689 E9PLD3 99 aa9.65□□□□□ -0.86
COL4A6-209ENST00000545689 H3BQ85 93 aa9.65□□□□□ -0.86
COL4A6-209ENST00000545689 NXPH4O95158 308 aa9.65□□□□□ -0.86
COL4A6-209ENST00000545689 SLURP1P55000 103 aa9.65□□□□□ -0.86
COL4A6-209ENST00000545689 ZFP36P26651 326 aaKnown RBP9.65□□□□□ -0.87
COL4A6-209ENST00000545689 ANKRD29Q8N6D5 301 aa9.65□□□□□ -0.87
COL4A6-209ENST00000545689 DOCK11Q5JSL3 2073 aa9.65□□□□□ -0.87
COL4A6-209ENST00000545689 PKIGQ9Y2B9 76 aa9.64□□□□□ -0.87
COL4A6-209ENST00000545689 RNASE13Q5GAN3 156 aaKnown RBP9.64□□□□□ -0.87
COL4A6-209ENST00000545689 FANCD2OSQ96PS1 177 aa9.64□□□□□ -0.87
COL4A6-209ENST00000545689 C2orf70A6NJV1 201 aa9.64□□□□□ -0.87
COL4A6-209ENST00000545689 Q6ZPA2 131 aa9.64□□□□□ -0.87
COL4A6-209ENST00000545689 NTN5Q8WTR8 489 aaPredicted RBP9.64□□□□□ -0.87
COL4A6-209ENST00000545689 H0YGX0 51 aa9.64□□□□□ -0.87
COL4A6-209ENST00000545689 BLCAPP62952 87 aa9.64□□□□□ -0.87
COL4A6-209ENST00000545689 BAALCQ8WXS3 180 aa9.64□□□□□ -0.87
COL4A6-209ENST00000545689 MUC22E2RYF6 1773 aaPredicted RBP9.64□□□□□ -0.87
COL4A6-209ENST00000545689 ORMDL1Q9P0S3 153 aa9.64□□□□□ -0.87
COL4A6-209ENST00000545689 AMTNQ6UX39 209 aa9.63□□□□□ -0.87
COL4A6-209ENST00000545689 C4orf3Q8WVX3 66 aa9.63□□□□□ -0.87
COL4A6-209ENST00000545689 CCL25O15444 150 aa9.63□□□□□ -0.87
COL4A6-209ENST00000545689 BRWD1-AS2P59051 145 aa9.63□□□□□ -0.87
COL4A6-209ENST00000545689 A6NDX4 124 aa9.63□□□□□ -0.87
COL4A6-209ENST00000545689 ZNF295-AS1Q8N0V1 137 aa9.63□□□□□ -0.87
COL4A6-209ENST00000545689 ODF3Q96PU9 254 aa9.63□□□□□ -0.87
COL4A6-209ENST00000545689 IGHV4OR15-8A0A075B7B6 117 aa9.62□□□□□ -0.87
COL4A6-209ENST00000545689 A0A087WW49 117 aa9.62□□□□□ -0.87
COL4A6-209ENST00000545689 TMEM126AQ9H061 195 aa9.62□□□□□ -0.87
COL4A6-209ENST00000545689 IGLV2-8P01709 118 aa9.62□□□□□ -0.87
COL4A6-209ENST00000545689 Q8N1Y9 231 aa9.62□□□□□ -0.87
COL4A6-209ENST00000545689 CEP250Q9BV73 2442 aa9.62□□□□□ -0.87
COL4A6-209ENST00000545689 TDRG1Q3Y452 100 aa9.62□□□□□ -0.87
COL4A6-209ENST00000545689 EP300Q09472 2414 aaPredicted RBP9.62□□□□□ -0.87
COL4A6-209ENST00000545689 BAALC-AS2P0C853 105 aa9.61□□□□□ -0.87
COL4A6-209ENST00000545689 PIFOQ8TCI5 191 aa9.61□□□□□ -0.87
COL4A6-209ENST00000545689 ODF1Q14990 250 aa9.61□□□□□ -0.87
COL4A6-209ENST00000545689 DEFB136Q30KP8 78 aa9.61□□□□□ -0.87
COL4A6-209ENST00000545689 ICOSQ9Y6W8 199 aa9.61□□□□□ -0.87
COL4A6-209ENST00000545689 NUP210LQ5VU65 1888 aa9.61□□□□□ -0.87
COL4A6-209ENST00000545689 APRG1Q8IVJ8 170 aa9.61□□□□□ -0.87
COL4A6-209ENST00000545689 MUSTN1Q8IVN3 82 aa9.61□□□□□ -0.87
COL4A6-209ENST00000545689 Q8NA96 180 aa9.61□□□□□ -0.87
COL4A6-209ENST00000545689 A0A0J9YXV3 536 aa9.61□□□□□ -0.87
COL4A6-209ENST00000545689 ATP6V0E2Q8NHE4 81 aa9.61□□□□□ -0.87
COL4A6-209ENST00000545689 CNOT1A5YKK6 2376 aaKnown RBP9.61□□□□□ -0.87
COL4A6-209ENST00000545689 XCL1P47992 114 aa9.6□□□□□ -0.87
COL4A6-209ENST00000545689 TNRC6AQ8NDV7 1962 aaKnown RBP9.6□□□□□ -0.87
COL4A6-209ENST00000545689 PROP1O75360 226 aa9.6□□□□□ -0.87
COL4A6-209ENST00000545689 C15orf53Q8NAA6 179 aa9.6□□□□□ -0.87
COL4A6-209ENST00000545689 MRPL23Q16540 153 aaKnown RBP9.6□□□□□ -0.87
COL4A6-209ENST00000545689 COX7B2Q8TF08 81 aa9.6□□□□□ -0.87
COL4A6-209ENST00000545689 TAX1BP3O14907 124 aa9.6□□□□□ -0.87
COL4A6-209ENST00000545689 MYCNOSP40205 109 aa9.6□□□□□ -0.87
COL4A6-209ENST00000545689 TRBV7-3A0A075B6L6 115 aa9.59□□□□□ -0.87
COL4A6-209ENST00000545689 EML6Q6ZMW3 1958 aa9.59□□□□□ -0.87
COL4A6-209ENST00000545689 MLST8Q9BVC4 326 aa9.59□□□□□ -0.87
COL4A6-209ENST00000545689 A4D1N5 150 aa9.59□□□□□ -0.87
COL4A6-209ENST00000545689 CRYGBP07316 175 aa9.59□□□□□ -0.87
COL4A6-209ENST00000545689 NCOR1O75376 2440 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms