RNA–Protein interactions for RNA: ENST00000545042.1

DDX55-213, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-213ENST00000545042 NEGR1Q7Z3B1 354 aa9.17□□□□□ -0.94
DDX55-213ENST00000545042 TXNDC17Q9BRA2 123 aa9.17□□□□□ -0.94
DDX55-213ENST00000545042 PGPEP1LA6NFU8 196 aa9.16□□□□□ -0.94
DDX55-213ENST00000545042 PRSS29PA6NIE9 313 aa9.16□□□□□ -0.94
DDX55-213ENST00000545042 KRBOX1C9JBD0 128 aa9.16□□□□□ -0.94
DDX55-213ENST00000545042 K7EQD1 137 aa9.16□□□□□ -0.94
DDX55-213ENST00000545042 M0R036 132 aa9.16□□□□□ -0.94
DDX55-213ENST00000545042 RTL8CO15255 209 aa9.16□□□□□ -0.94
DDX55-213ENST00000545042 IFNA1P01562 189 aa9.16□□□□□ -0.94
DDX55-213ENST00000545042 CRIP1P50238 77 aa9.16□□□□□ -0.94
DDX55-213ENST00000545042 ZNF674Q2M3X9 581 aa9.16□□□□□ -0.94
DDX55-213ENST00000545042 ZNF506Q5JVG8 444 aa9.16□□□□□ -0.94
DDX55-213ENST00000545042 CFAP126Q5VTH2 177 aa9.16□□□□□ -0.94
DDX55-213ENST00000545042 BAGE2Q86Y30 109 aa9.16□□□□□ -0.94
DDX55-213ENST00000545042 IL36BQ9NZH7 164 aa9.16□□□□□ -0.94
DDX55-213ENST00000545042 A8MWV9 139 aa9.15□□□□□ -0.94
DDX55-213ENST00000545042 RS1O15537 224 aa9.15□□□□□ -0.94
DDX55-213ENST00000545042 GATA1P15976 413 aaPredicted RBP9.15□□□□□ -0.94
DDX55-213ENST00000545042 CCL20P78556 96 aa9.15□□□□□ -0.94
DDX55-213ENST00000545042 PIK3CD-AS1Q5SR53 167 aa9.15□□□□□ -0.94
DDX55-213ENST00000545042 SH2D6Q7Z4S9 175 aa9.15□□□□□ -0.94
DDX55-213ENST00000545042 C9orf62Q8N4C0 152 aa9.15□□□□□ -0.94
DDX55-213ENST00000545042 NHLRC2Q8NBF2 726 aa9.15□□□□□ -0.94
DDX55-213ENST00000545042 SYT8Q8NBV8 401 aa9.15□□□□□ -0.94
DDX55-213ENST00000545042 H3BVH4 76 aa9.14□□□□□ -0.95
DDX55-213ENST00000545042 LINC01559Q495D7 138 aa9.14□□□□□ -0.95
DDX55-213ENST00000545042 DNLZQ5SXM8 178 aa9.14□□□□□ -0.95
DDX55-213ENST00000545042 LYPD5Q6UWN5 251 aa9.14□□□□□ -0.95
DDX55-213ENST00000545042 C6orf223Q8N319 242 aa9.14□□□□□ -0.95
DDX55-213ENST00000545042 PRADC1Q9BSG0 188 aa9.14□□□□□ -0.95
DDX55-213ENST00000545042 TMSB15BA0A087X1C1 80 aa9.13□□□□□ -0.95
DDX55-213ENST00000545042 IGHV3-73A0A0B4J1V6 119 aa9.13□□□□□ -0.95
DDX55-213ENST00000545042 TRBV6-4A0A1B0GX49 114 aa9.13□□□□□ -0.95
DDX55-213ENST00000545042 A0A1W2PPQ1 181 aa9.13□□□□□ -0.95
DDX55-213ENST00000545042 GRIFINA4D1Z8 144 aa9.13□□□□□ -0.95
DDX55-213ENST00000545042 SIVA1O15304 175 aa9.13□□□□□ -0.95
DDX55-213ENST00000545042 PDE6DO43924 150 aa9.13□□□□□ -0.95
DDX55-213ENST00000545042 NXPH4O95158 308 aa9.13□□□□□ -0.95
DDX55-213ENST00000545042 ARMS2P0C7Q2 107 aa9.13□□□□□ -0.95
DDX55-213ENST00000545042 MGST1P10620 155 aaKnown RBP9.13□□□□□ -0.95
DDX55-213ENST00000545042 RPL35P42766 123 aaKnown RBP9.13□□□□□ -0.95
DDX55-213ENST00000545042 RHOHQ15669 191 aa9.13□□□□□ -0.95
DDX55-213ENST00000545042 PHLDA3Q9Y5J5 127 aa9.13□□□□□ -0.95
DDX55-213ENST00000545042 TAGLN2P37802 199 aaKnown RBP9.12□□□□□ -0.95
DDX55-213ENST00000545042 MEF2BQ02080 365 aaPredicted RBP9.12□□□□□ -0.95
DDX55-213ENST00000545042 ZFP2Q6ZN57 461 aa9.12□□□□□ -0.95
DDX55-213ENST00000545042 SLC25A29Q8N8R3 303 aa9.12□□□□□ -0.95
DDX55-213ENST00000545042 C11orf52Q96A22 123 aa9.12□□□□□ -0.95
DDX55-213ENST00000545042 MLST8Q9BVC4 326 aa9.12□□□□□ -0.95
DDX55-213ENST00000545042 DNAH2Q9P225 4427 aa9.11□□□□□ -0.95
DDX55-213ENST00000545042 LOC100131303A0A0U1RQF7 123 aa9.11□□□□□ -0.95
DDX55-213ENST00000545042 BCL2P10415 239 aa9.11□□□□□ -0.95
DDX55-213ENST00000545042 BTF3P20290 206 aaKnown RBP9.11□□□□□ -0.95
DDX55-213ENST00000545042 PRR27Q6MZM9 219 aa9.11□□□□□ -0.95
DDX55-213ENST00000545042 PARLQ9H300 379 aa9.11□□□□□ -0.95
DDX55-213ENST00000545042 HECTD4Q9Y4D8 3996 aa9.1□□□□□ -0.95
DDX55-213ENST00000545042 TRAV9-2A0A087WT02 112 aa9.1□□□□□ -0.95
DDX55-213ENST00000545042 RHODO00212 210 aa9.1□□□□□ -0.95
DDX55-213ENST00000545042 BLOC1S1P78537 153 aa9.1□□□□□ -0.95
DDX55-213ENST00000545042 DMRTA1Q5VZB9 504 aa9.1□□□□□ -0.95
DDX55-213ENST00000545042 ALKAL2Q6UX46 152 aa9.1□□□□□ -0.95
DDX55-213ENST00000545042 ZFP82Q8N141 532 aa9.1□□□□□ -0.95
DDX55-213ENST00000545042 DERL1Q9BUN8 251 aa9.1□□□□□ -0.95
DDX55-213ENST00000545042 VAX2Q9UIW0 290 aa9.1□□□□□ -0.95
DDX55-213ENST00000545042 M0R381 172 aa9.09□□□□□ -0.95
DDX55-213ENST00000545042 CXCL1P09341 107 aa9.09□□□□□ -0.95
DDX55-213ENST00000545042 MED14OSP0DP75 135 aa9.09□□□□□ -0.95
DDX55-213ENST00000545042 GNG4P50150 75 aa9.09□□□□□ -0.95
DDX55-213ENST00000545042 CENPWQ5EE01 88 aa9.09□□□□□ -0.95
DDX55-213ENST00000545042 DAZAP1Q96EP5 407 aaKnown RBP9.09□□□□□ -0.95
DDX55-213ENST00000545042 SMIM12Q96EX1 92 aa9.09□□□□□ -0.95
DDX55-213ENST00000545042 SCRT2Q9NQ03 307 aa9.09□□□□□ -0.95
DDX55-213ENST00000545042 MED9Q9NWA0 146 aa9.09□□□□□ -0.95
DDX55-213ENST00000545042 LY96Q9Y6Y9 160 aa9.09□□□□□ -0.95
DDX55-213ENST00000545042 A0A1B0GVG6 124 aa9.08□□□□□ -0.96
DDX55-213ENST00000545042 A0A1B0GVY2 172 aa9.08□□□□□ -0.96
DDX55-213ENST00000545042 TIRAPP58753 221 aa9.08□□□□□ -0.96
DDX55-213ENST00000545042 RPL19P84098 196 aaKnown RBP9.08□□□□□ -0.96
DDX55-213ENST00000545042 KRTAP1-5Q9BYS1 174 aa9.08□□□□□ -0.96
DDX55-213ENST00000545042 JPT2Q9H910 190 aa9.08□□□□□ -0.96
DDX55-213ENST00000545042 BOLA1Q9Y3E2 137 aa9.08□□□□□ -0.96
DDX55-213ENST00000545042 FAT2Q9NYQ8 4349 aa9.07□□□□□ -0.96
DDX55-213ENST00000545042 K7EP13 123 aa9.07□□□□□ -0.96
DDX55-213ENST00000545042 EVI2AP22794 236 aa9.07□□□□□ -0.96
DDX55-213ENST00000545042 NKX2-5P52952 324 aaPredicted RBP9.07□□□□□ -0.96
DDX55-213ENST00000545042 FAM74A4Q5TZK3 123 aa9.07□□□□□ -0.96
DDX55-213ENST00000545042 SFRP2Q96HF1 295 aa9.07□□□□□ -0.96
DDX55-213ENST00000545042 BIN3Q9NQY0 253 aa9.07□□□□□ -0.96
DDX55-213ENST00000545042 DNAH17Q9UFH2 4485 aa9.07□□□□□ -0.96
DDX55-213ENST00000545042 TRAV8-6A0A0B4J262 113 aa9.06□□□□□ -0.96
DDX55-213ENST00000545042 RAB19A4D1S5 217 aa9.06□□□□□ -0.96
DDX55-213ENST00000545042 RPS20P60866 119 aaKnown RBP9.06□□□□□ -0.96
DDX55-213ENST00000545042 ZNF575Q86XF7 245 aa9.06□□□□□ -0.96
DDX55-213ENST00000545042 WFDC10BQ8IUB3 73 aa9.06□□□□□ -0.96
DDX55-213ENST00000545042 ATP6V0E2Q8NHE4 81 aa9.06□□□□□ -0.96
DDX55-213ENST00000545042 SAMD10Q9BYL1 202 aa9.06□□□□□ -0.96
DDX55-213ENST00000545042 A0A087WWL8 130 aa9.05□□□□□ -0.96
DDX55-213ENST00000545042 XKRY2A2RUG3 117 aa9.05□□□□□ -0.96
DDX55-213ENST00000545042 GAGE12JA6NER3 117 aa9.05□□□□□ -0.96
DDX55-213ENST00000545042 OR5AL1P0C617 328 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms