RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 TRAV26-2A0A0B4J265 109 aa1.88□□□□□ -2.11
SCFD1-207ENST00000544052 G3V318 75 aa1.88□□□□□ -2.11
SCFD1-207ENST00000544052 GPR31O00270 319 aa1.88□□□□□ -2.11
SCFD1-207ENST00000544052 GEMIN2O14893 280 aaKnown RBP1.88□□□□□ -2.11
SCFD1-207ENST00000544052 CYB5AP00167 134 aa1.88□□□□□ -2.11
SCFD1-207ENST00000544052 HTR1AP08908 422 aa1.88□□□□□ -2.11
SCFD1-207ENST00000544052 GZMHP20718 246 aa1.88□□□□□ -2.11
SCFD1-207ENST00000544052 PSMB8P28062 276 aa1.88□□□□□ -2.11
SCFD1-207ENST00000544052 ZNF137PP52743 207 aa1.88□□□□□ -2.11
SCFD1-207ENST00000544052 RBM11P57052 281 aaKnown RBP1.88□□□□□ -2.11
SCFD1-207ENST00000544052 CDC42P60953 191 aa1.88□□□□□ -2.11
SCFD1-207ENST00000544052 GNG5P63218 68 aa1.88□□□□□ -2.11
SCFD1-207ENST00000544052 INSL4Q14641 139 aa1.88□□□□□ -2.11
SCFD1-207ENST00000544052 TMEM244Q5VVB8 128 aa1.88□□□□□ -2.11
SCFD1-207ENST00000544052 SBSPONQ8IVN8 264 aa1.88□□□□□ -2.11
SCFD1-207ENST00000544052 Q8IYB0 196 aa1.88□□□□□ -2.11
SCFD1-207ENST00000544052 LINC00311Q8N616 119 aa1.88□□□□□ -2.11
SCFD1-207ENST00000544052 BPIFB6Q8NFQ5 453 aa1.88□□□□□ -2.11
SCFD1-207ENST00000544052 MUC7Q8TAX7 377 aa1.88□□□□□ -2.11
SCFD1-207ENST00000544052 GALMQ96C23 342 aa1.88□□□□□ -2.11
SCFD1-207ENST00000544052 ABHD14BQ96IU4 210 aa1.88□□□□□ -2.11
SCFD1-207ENST00000544052 DNAH6Q9C0G6 4158 aa1.88□□□□□ -2.11
SCFD1-207ENST00000544052 MRPS16Q9Y3D3 137 aaKnown RBP1.88□□□□□ -2.11
SCFD1-207ENST00000544052 TRBV24-1A0A075B6N3 115 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 IGKV2-24A0A0C4DH68 120 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 KNCNA6PVL3 124 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 OOSP1A8MZH6 123 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 I3L521 148 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 LECT2O14960 151 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 DEGS1O15121 323 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 SH2D1AO60880 128 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 ATG12O94817 140 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 IGLV6-57P01721 117 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 SULT1A3P0DMM9 295 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 SULT1A4P0DMN0 295 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 S100A7P31151 101 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 DEFA5Q01523 94 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 DEFB121Q5J5C9 76 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 SCXQ7RTU7 201 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 SLC35E3Q7Z769 313 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 BAP18Q8IXM2 172 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 ACBD7Q8N6N7 88 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 OR4X2Q8NGF9 303 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 OR4K15Q8NH41 348 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 MCFD2Q8NI22 146 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 GINS3Q9BRX5 216 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 EIF5A2Q9GZV4 153 aaKnown RBP1.87□□□□□ -2.11
SCFD1-207ENST00000544052 TMEM222Q9H0R3 208 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 VPS13DQ5THJ4 4388 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 ABCA13Q86UQ4 5058 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 TMEM212A6NML5 194 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 A8MUN3 132 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 SDCBPO00560 298 aaPredicted RBP1.87□□□□□ -2.11
SCFD1-207ENST00000544052 ARPC5O15511 151 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 DEDDO75618 318 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 C1QBP02746 253 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 BLVRBP30043 206 aaPredicted RBP1.87□□□□□ -2.11
SCFD1-207ENST00000544052 DDTP30046 118 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 BRS3P32247 399 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 QRFPP83859 136 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 HES1Q14469 280 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 C10orf91Q5T1B1 145 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 LCE1BQ5T7P3 118 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 ZNF664Q8N3J9 261 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 ANKRD29Q8N6D5 301 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 Q8NAQ8 132 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 OR51H1Q8NH63 302 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 OR5AK2Q8NH90 309 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 MRPL30Q8TCC3 161 aaKnown RBP1.87□□□□□ -2.11
SCFD1-207ENST00000544052 HIST1H2BAQ96A08 127 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 TMEM106AQ96A25 262 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 NABP2Q9BQ15 211 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 BANF2Q9H503 90 aa1.87□□□□□ -2.11
SCFD1-207ENST00000544052 HECTD4Q9Y4D8 3996 aa1.86□□□□□ -2.11
SCFD1-207ENST00000544052 PNMA8CA0A1B0GUJ8 204 aa1.86□□□□□ -2.11
SCFD1-207ENST00000544052 LOC100130705A0A1B0GUX0 176 aa1.86□□□□□ -2.11
SCFD1-207ENST00000544052 TMEM30CPA0ZSE6 113 aa1.86□□□□□ -2.11
SCFD1-207ENST00000544052 OR11H12B2RN74 326 aa1.86□□□□□ -2.11
SCFD1-207ENST00000544052 M0QZK8 103 aa1.86□□□□□ -2.11
SCFD1-207ENST00000544052 LST1O00453 97 aa1.86□□□□□ -2.11
SCFD1-207ENST00000544052 HMGB3O15347 200 aaKnown RBP1.86□□□□□ -2.11
SCFD1-207ENST00000544052 ORC5O43913 435 aa1.86□□□□□ -2.11
SCFD1-207ENST00000544052 NDUFA3O95167 84 aa1.86□□□□□ -2.11
SCFD1-207ENST00000544052 SAA2P0DJI9 122 aaPredicted RBP1.86□□□□□ -2.11
SCFD1-207ENST00000544052 HMGN3Q15651 99 aa1.86□□□□□ -2.11
SCFD1-207ENST00000544052 MORN2Q502X0 79 aa1.86□□□□□ -2.11
SCFD1-207ENST00000544052 RPL39P5Q59GN2 51 aa1.86□□□□□ -2.11
SCFD1-207ENST00000544052 ZNF833PQ6ZTB9 187 aa1.86□□□□□ -2.11
SCFD1-207ENST00000544052 LYZL2Q7Z4W2 148 aa1.86□□□□□ -2.11
SCFD1-207ENST00000544052 EXOC3-AS1Q8N2X6 119 aa1.86□□□□□ -2.11
SCFD1-207ENST00000544052 OR11H1Q8NG94 326 aa1.86□□□□□ -2.11
SCFD1-207ENST00000544052 OR11H2Q8NH07 326 aa1.86□□□□□ -2.11
SCFD1-207ENST00000544052 RAB2BQ8WUD1 216 aa1.86□□□□□ -2.11
SCFD1-207ENST00000544052 C4orf3Q8WVX3 66 aa1.86□□□□□ -2.11
SCFD1-207ENST00000544052 ARL11Q969Q4 196 aa1.86□□□□□ -2.11
SCFD1-207ENST00000544052 BORCS7Q96B45 105 aa1.86□□□□□ -2.11
SCFD1-207ENST00000544052 FAM103A1Q9BTL3 118 aaKnown RBP1.86□□□□□ -2.11
SCFD1-207ENST00000544052 CYSLTR1Q9Y271 337 aa1.86□□□□□ -2.11
SCFD1-207ENST00000544052 LSM2Q9Y333 95 aaKnown RBP1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms