RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 HMSDA8MTL9 139 aa11.15□□□□□ -0.62
CCND1-205ENST00000542367 S100A4P26447 101 aaKnown RBP11.15□□□□□ -0.62
CCND1-205ENST00000542367 CRIP1P50238 77 aa11.15□□□□□ -0.62
CCND1-205ENST00000542367 CST9LP1Q5W188 147 aa11.15□□□□□ -0.62
CCND1-205ENST00000542367 PRADC1Q9BSG0 188 aa11.15□□□□□ -0.62
CCND1-205ENST00000542367 TRBV6-4A0A1B0GX49 114 aa11.14□□□□□ -0.63
CCND1-205ENST00000542367 SEC11BP0C7V7 166 aa11.14□□□□□ -0.63
CCND1-205ENST00000542367 DNAH10OSP0CZ25 163 aa11.14□□□□□ -0.63
CCND1-205ENST00000542367 EVI2AP22794 236 aa11.14□□□□□ -0.63
CCND1-205ENST00000542367 ZC2HC1AQ96GY0 325 aa11.14□□□□□ -0.63
CCND1-205ENST00000542367 ZFP30Q9Y2G7 519 aa11.14□□□□□ -0.63
CCND1-205ENST00000542367 A0A0D9SG52 128 aa11.13□□□□□ -0.63
CCND1-205ENST00000542367 B4DEV8 164 aa11.13□□□□□ -0.63
CCND1-205ENST00000542367 ASIPP42127 132 aa11.13□□□□□ -0.63
CCND1-205ENST00000542367 UBE2G1P62253 170 aa11.13□□□□□ -0.63
CCND1-205ENST00000542367 RHOHQ15669 191 aa11.13□□□□□ -0.63
CCND1-205ENST00000542367 NFE4Q86UQ8 179 aa11.13□□□□□ -0.63
CCND1-205ENST00000542367 SFT2D1Q8WV19 159 aa11.13□□□□□ -0.63
CCND1-205ENST00000542367 FMC1Q96HJ9 113 aa11.13□□□□□ -0.63
CCND1-205ENST00000542367 ZNF471Q9BX82 626 aaPredicted RBP11.13□□□□□ -0.63
CCND1-205ENST00000542367 DNAH5Q8TE73 4624 aa11.13□□□□□ -0.63
CCND1-205ENST00000542367 RYR1P21817 5038 aa11.13□□□□□ -0.63
CCND1-205ENST00000542367 UMAD1C9J7I0 102 aa11.12□□□□□ -0.63
CCND1-205ENST00000542367 KRBOX1C9JBD0 128 aa11.12□□□□□ -0.63
CCND1-205ENST00000542367 K7EP13 123 aa11.12□□□□□ -0.63
CCND1-205ENST00000542367 PAGE4O60829 102 aa11.12□□□□□ -0.63
CCND1-205ENST00000542367 SH2D1AO60880 128 aa11.12□□□□□ -0.63
CCND1-205ENST00000542367 CDK2AP2O75956 126 aa11.12□□□□□ -0.63
CCND1-205ENST00000542367 MGST1P10620 155 aaKnown RBP11.12□□□□□ -0.63
CCND1-205ENST00000542367 TIRAPP58753 221 aa11.12□□□□□ -0.63
CCND1-205ENST00000542367 LGALSLQ3ZCW2 172 aaPredicted RBP11.12□□□□□ -0.63
CCND1-205ENST00000542367 COX8CQ7Z4L0 72 aa11.12□□□□□ -0.63
CCND1-205ENST00000542367 FAM213BQ8TBF2 198 aa11.12□□□□□ -0.63
CCND1-205ENST00000542367 MBD3L1Q8WWY6 194 aa11.12□□□□□ -0.63
CCND1-205ENST00000542367 TCEAL7Q9BRU2 100 aa11.12□□□□□ -0.63
CCND1-205ENST00000542367 IL36BQ9NZH7 164 aa11.12□□□□□ -0.63
CCND1-205ENST00000542367 MSRB1Q9NZV6 116 aa11.12□□□□□ -0.63
CCND1-205ENST00000542367 KANTRA0A1W2PQU2 76 aa11.11□□□□□ -0.63
CCND1-205ENST00000542367 A8MWV9 139 aa11.11□□□□□ -0.63
CCND1-205ENST00000542367 M0R036 132 aa11.11□□□□□ -0.63
CCND1-205ENST00000542367 BCL2L11O43521 198 aa11.11□□□□□ -0.63
CCND1-205ENST00000542367 CRYGDP07320 174 aa11.11□□□□□ -0.63
CCND1-205ENST00000542367 FAM162BQ5T6X4 162 aa11.11□□□□□ -0.63
CCND1-205ENST00000542367 Q6ZSN1 163 aa11.11□□□□□ -0.63
CCND1-205ENST00000542367 PARLQ9H300 379 aa11.11□□□□□ -0.63
CCND1-205ENST00000542367 APOBP04114 4563 aaKnown RBP11.11□□□□□ -0.63
CCND1-205ENST00000542367 IGHV3-38A0A0C4DH36 116 aa11.1□□□□□ -0.63
CCND1-205ENST00000542367 TRBV6-1A0A0K0K1D8 114 aa11.1□□□□□ -0.63
CCND1-205ENST00000542367 A0A1B0GV50 99 aa11.1□□□□□ -0.63
CCND1-205ENST00000542367 GRIFINA4D1Z8 144 aa11.1□□□□□ -0.63
CCND1-205ENST00000542367 H3BVH4 76 aa11.1□□□□□ -0.63
CCND1-205ENST00000542367 LTAP01374 205 aa11.1□□□□□ -0.63
CCND1-205ENST00000542367 ARMS2P0C7Q2 107 aa11.1□□□□□ -0.63
CCND1-205ENST00000542367 PIK3CD-AS1Q5SR53 167 aa11.1□□□□□ -0.63
CCND1-205ENST00000542367 DMRTA1Q5VZB9 504 aa11.1□□□□□ -0.63
CCND1-205ENST00000542367 ZFP2Q6ZN57 461 aa11.1□□□□□ -0.63
CCND1-205ENST00000542367 JPT2Q9H910 190 aa11.1□□□□□ -0.63
CCND1-205ENST00000542367 TRAV8-6A0A0B4J262 113 aa11.09□□□□□ -0.63
CCND1-205ENST00000542367 EREGO14944 169 aa11.09□□□□□ -0.63
CCND1-205ENST00000542367 AKR1C3P42330 323 aa11.09□□□□□ -0.63
CCND1-205ENST00000542367 ERVFC1-1P60608 527 aa11.09□□□□□ -0.63
CCND1-205ENST00000542367 ZNF674Q2M3X9 581 aa11.09□□□□□ -0.63
CCND1-205ENST00000542367 OR10J3Q5JRS4 329 aa11.09□□□□□ -0.63
CCND1-205ENST00000542367 DNLZQ5SXM8 178 aa11.09□□□□□ -0.63
CCND1-205ENST00000542367 C10orf126Q8N4M7 172 aa11.09□□□□□ -0.63
CCND1-205ENST00000542367 ATP6V0E2Q8NHE4 81 aa11.09□□□□□ -0.63
CCND1-205ENST00000542367 SAMD10Q9BYL1 202 aa11.09□□□□□ -0.63
CCND1-205ENST00000542367 FUSP35637 526 aaKnown RBP eCLIP11.08□□□□□ -0.64
CCND1-205ENST00000542367 EIF5AP63241 154 aaKnown RBP11.08□□□□□ -0.64
CCND1-205ENST00000542367 TMUB2Q71RG4 321 aa11.08□□□□□ -0.64
CCND1-205ENST00000542367 KRTAP4-5Q9BYR2 181 aa11.08□□□□□ -0.64
CCND1-205ENST00000542367 PGPEP1Q9NXJ5 209 aa11.08□□□□□ -0.64
CCND1-205ENST00000542367 TMSB15BA0A087X1C1 80 aa11.07□□□□□ -0.64
CCND1-205ENST00000542367 PFDN1O60925 122 aa11.07□□□□□ -0.64
CCND1-205ENST00000542367 H2AFB1P0C5Y9 115 aa11.07□□□□□ -0.64
CCND1-205ENST00000542367 LINC01559Q495D7 138 aa11.07□□□□□ -0.64
CCND1-205ENST00000542367 LINC01556Q5JQF7 62 aa11.07□□□□□ -0.64
CCND1-205ENST00000542367 LELP1Q5T871 98 aa11.07□□□□□ -0.64
CCND1-205ENST00000542367 UFSP1Q6NVU6 142 aa11.07□□□□□ -0.64
CCND1-205ENST00000542367 SYT8Q8NBV8 401 aa11.07□□□□□ -0.64
CCND1-205ENST00000542367 GTSF1LQ9H1H1 148 aa11.07□□□□□ -0.64
CCND1-205ENST00000542367 A0A087WTM6 91 aa11.06□□□□□ -0.64
CCND1-205ENST00000542367 SCO2A0A1W2PP80 73 aa11.06□□□□□ -0.64
CCND1-205ENST00000542367 GAGE12JA6NER3 117 aa11.06□□□□□ -0.64
CCND1-205ENST00000542367 GAGE1Q13065 139 aa11.06□□□□□ -0.64
CCND1-205ENST00000542367 GAGE4Q13068 117 aa11.06□□□□□ -0.64
CCND1-205ENST00000542367 GAGE5Q13069 117 aa11.06□□□□□ -0.64
CCND1-205ENST00000542367 GAGE13Q4V321 117 aa11.06□□□□□ -0.64
CCND1-205ENST00000542367 MAPKAPK5-AS1Q8N8E1 139 aa11.06□□□□□ -0.64
CCND1-205ENST00000542367 Q9UF83 564 aa11.06□□□□□ -0.64
CCND1-205ENST00000542367 BOLA1Q9Y3E2 137 aa11.06□□□□□ -0.64
CCND1-205ENST00000542367 PHLDA3Q9Y5J5 127 aa11.06□□□□□ -0.64
CCND1-205ENST00000542367 PCLOQ9Y6V0 5065 aa11.05□□□□□ -0.64
CCND1-205ENST00000542367 S100A9P06702 114 aaKnown RBP11.05□□□□□ -0.64
CCND1-205ENST00000542367 TPT1P13693 172 aaKnown RBP11.05□□□□□ -0.64
CCND1-205ENST00000542367 C14orf178Q8N769 122 aaPredicted RBP11.05□□□□□ -0.64
CCND1-205ENST00000542367 SCRT2Q9NQ03 307 aa11.05□□□□□ -0.64
CCND1-205ENST00000542367 IBA57-AS1B1ANH7 110 aa11.04□□□□□ -0.64
CCND1-205ENST00000542367 IGHV3-30P01768 117 aa11.04□□□□□ -0.64
CCND1-205ENST00000542367 IGHV3-33P01772 117 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms