RNA–Protein interactions for RNA: ENST00000541427.1

KNTC1-211, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 641 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-211ENST00000541427 CNIH1O95406 144 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 IL4P05112 153 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 S100A9P06702 114 aaKnown RBP2.2□□□□□ -2.06
KNTC1-211ENST00000541427 HIST1H2BJP06899 126 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 NBEAP1P0C6P0 100 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 RD3LP0DJH9 198 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 APELAP0DMC3 54 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 HIST1H2BOP23527 126 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 HIST1H2BBP33778 126 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 RAB9AP51151 201 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 HIST1H2BDP58876 126 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 HIST1H2BCP62807 126 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 ADIRFQ15847 76 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 HIST2H2BEQ16778 126 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 CENPWQ5EE01 88 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 ACTL10Q5JWF8 245 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.2□□□□□ -2.06
KNTC1-211ENST00000541427 C1orf194Q5T5A4 169 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 UNQ5815/PRO19632Q6UWF5 114 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 BRD3OSQ6XYD6 125 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 S100A7AQ86SG5 101 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 Q86TA4 180 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 BPIFA4PQ86YQ2 179 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 Q8N2B8 174 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 TMEM75Q8N9X5 138 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 HIST1H2BHQ93079 126 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 SFRP2Q96HF1 295 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 FMC1Q96HJ9 113 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 GPR82Q96P67 336 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 HIST1H2BNQ99877 126 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 HIST1H2BMQ99879 126 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 BIN3Q9NQY0 253 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 OTORQ9NRC9 128 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 IL36BQ9NZH7 164 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 ZNF492Q9P255 531 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 ZMAT5Q9UDW3 170 aaKnown RBP2.2□□□□□ -2.06
KNTC1-211ENST00000541427 PITPNC1Q9UKF7 332 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 EPDR1Q9UM22 224 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 RELNP78509 3460 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 PLXNB1O43157 2135 aa2.2□□□□□ -2.06
KNTC1-211ENST00000541427 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.19□□□□□ -2.069e-41■■■■■ 149.2
KNTC1-211ENST00000541427 IGLV4-60A0A075B6I1 120 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.19□□□□□ -2.06
KNTC1-211ENST00000541427 IGHV3-21A0A0B4J1V1 117 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 A0A1B0GXF2 115 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 RBAKDNA6NC62 111 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 SLC17A3O00476 420 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 NDUFA4O00483 81 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 OR2J3O76001 311 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 TRGC2P03986 189 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 TRGC1P0CF51 173 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 ESDP10768 282 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 RPL7P18124 248 aaKnown RBP2.19□□□□□ -2.06
KNTC1-211ENST00000541427 ORM2P19652 201 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 PSMB8P28062 276 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 S100A7P31151 101 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 RPL13AP40429 203 aaKnown RBP2.19□□□□□ -2.06
KNTC1-211ENST00000541427 GALR1P47211 349 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 GNG4P50150 75 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 CEBPGP53567 150 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 FOXA3P55318 350 aaPredicted RBP2.19□□□□□ -2.06
KNTC1-211ENST00000541427 RHOGP84095 191 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 MOBPQ13875 183 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 DEFB112Q30KQ8 113 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 COX19Q49B96 90 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 DNLZQ5SXM8 178 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 IBA57Q5T440 356 aaKnown RBP2.19□□□□□ -2.06
KNTC1-211ENST00000541427 RASL11AQ6T310 242 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 TOMM20LQ6UXN7 152 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 TMEM183AQ8IXX5 376 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 TMEM86BQ8N661 226 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 Q8N976 141 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 GATD1Q8NB37 220 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 OR5T1Q8NG75 326 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 FRZBQ92765 325 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 EEF1AKMT3Q96AZ1 226 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 USMG5Q96IX5 58 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 OR5B12Q96R08 314 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 SLC50A1Q9BRV3 221 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 VPREB3Q9UKI3 123 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 SOX21Q9Y651 276 aaPredicted RBP2.19□□□□□ -2.06
KNTC1-211ENST00000541427 FLNCQ14315 2725 aa2.19□□□□□ -2.06
KNTC1-211ENST00000541427 CACNA1BQ00975 2339 aa2.18□□□□□ -2.06
KNTC1-211ENST00000541427 ZFYVE26Q68DK2 2539 aa2.18□□□□□ -2.06
KNTC1-211ENST00000541427 TRAV8-2A0A0B4J237 113 aa2.18□□□□□ -2.06
KNTC1-211ENST00000541427 IZUMO1RA6ND01 250 aa2.18□□□□□ -2.06
KNTC1-211ENST00000541427 PGPA6NDG6 321 aa2.18□□□□□ -2.06
KNTC1-211ENST00000541427 OR2T8A6NH00 312 aa2.18□□□□□ -2.06
KNTC1-211ENST00000541427 A8MWP6 167 aa2.18□□□□□ -2.06
KNTC1-211ENST00000541427 PPP5D1E7EU14 171 aa2.18□□□□□ -2.06
KNTC1-211ENST00000541427 J3QKU1 62 aa2.18□□□□□ -2.06
KNTC1-211ENST00000541427 K7EMT4 169 aa2.18□□□□□ -2.06
KNTC1-211ENST00000541427 MT-ND6P03923 174 aa2.18□□□□□ -2.06
KNTC1-211ENST00000541427 S100A8P05109 93 aa2.18□□□□□ -2.06
KNTC1-211ENST00000541427 SLC25A5P05141 298 aaKnown RBP2.18□□□□□ -2.06
KNTC1-211ENST00000541427 SMIM6P0DI80 62 aa2.18□□□□□ -2.06
KNTC1-211ENST00000541427 S100PP25815 95 aa2.18□□□□□ -2.06
KNTC1-211ENST00000541427 UBE2G1P62253 170 aa2.18□□□□□ -2.06
KNTC1-211ENST00000541427 RANP62826 216 aaKnown RBP2.18□□□□□ -2.06
KNTC1-211ENST00000541427 BLCAPP62952 87 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms