RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 RPL32P62910 135 aaKnown RBP4.1□□□□□ -1.75
PROM1-220ENST00000540805 TMEM170BQ5T4T1 132 aa4.1□□□□□ -1.75
PROM1-220ENST00000540805 ZNF493Q6ZR52 646 aa4.1□□□□□ -1.75
PROM1-220ENST00000540805 C8orf86Q6ZUL3 223 aa4.1□□□□□ -1.75
PROM1-220ENST00000540805 TMEM75Q8N9X5 138 aa4.1□□□□□ -1.75
PROM1-220ENST00000540805 VGLL1Q99990 258 aa4.1□□□□□ -1.75
PROM1-220ENST00000540805 PPDPFQ9H3Y8 114 aa4.1□□□□□ -1.75
PROM1-220ENST00000540805 DKK2Q9UBU2 259 aa4.1□□□□□ -1.75
PROM1-220ENST00000540805 SLC25A16P16260 332 aa4.1□□□□□ -1.75
PROM1-220ENST00000540805 HOXB4P17483 251 aaPredicted RBP4.1□□□□□ -1.75
PROM1-220ENST00000540805 DIAPH2-AS1Q14236 149 aa4.1□□□□□ -1.75
PROM1-220ENST00000540805 UBE2DNLQ8IWF7 75 aa4.1□□□□□ -1.75
PROM1-220ENST00000540805 SPATA25Q9BR10 227 aa4.1□□□□□ -1.75
PROM1-220ENST00000540805 TM2D2Q9BX73 214 aa4.1□□□□□ -1.75
PROM1-220ENST00000540805 C1QTNF4Q9BXJ3 329 aa4.1□□□□□ -1.75
PROM1-220ENST00000540805 TMEM14CQ9P0S9 112 aa4.1□□□□□ -1.75
PROM1-220ENST00000540805 NHLRC4P0CG21 123 aaPredicted RBP4.1□□□□□ -1.75
PROM1-220ENST00000540805 FAM104BQ5XKR9 115 aa4.1□□□□□ -1.75
PROM1-220ENST00000540805 AMN1Q8IY45 258 aa4.1□□□□□ -1.75
PROM1-220ENST00000540805 AJUBAQ96IF1 538 aa4.1□□□□□ -1.75
PROM1-220ENST00000540805 CHCHD5Q9BSY4 110 aa4.1□□□□□ -1.75
PROM1-220ENST00000540805 CHAC1Q9BUX1 264 aa4.1□□□□□ -1.75
PROM1-220ENST00000540805 HIGD1BQ9P298 99 aa4.1□□□□□ -1.75
PROM1-220ENST00000540805 U3KQK5 164 aa4.1□□□□□ -1.75
PROM1-220ENST00000540805 A0A087WX48 190 aa4.09□□□□□ -1.75
PROM1-220ENST00000540805 A0A1B0GWB2 263 aa4.09□□□□□ -1.75
PROM1-220ENST00000540805 H3BVH4 76 aa4.09□□□□□ -1.75
PROM1-220ENST00000540805 IGLV2-23P01705 113 aa4.09□□□□□ -1.75
PROM1-220ENST00000540805 ASIPP42127 132 aa4.09□□□□□ -1.75
PROM1-220ENST00000540805 TMEM190Q8WZ59 177 aa4.09□□□□□ -1.75
PROM1-220ENST00000540805 ANAPC13Q9BS18 74 aa4.09□□□□□ -1.75
PROM1-220ENST00000540805 TPSG1Q9NRR2 321 aa4.09□□□□□ -1.75
PROM1-220ENST00000540805 MRPL16Q9NX20 251 aaKnown RBP4.09□□□□□ -1.75
PROM1-220ENST00000540805 ITPR3Q14573 2671 aa4.09□□□□□ -1.75
PROM1-220ENST00000540805 TMEM213A2RRL7 107 aa4.09□□□□□ -1.75
PROM1-220ENST00000540805 LYZL1Q6UWQ5 148 aa4.09□□□□□ -1.75
PROM1-220ENST00000540805 CFAP46Q8IYW2 2715 aa4.09□□□□□ -1.75
PROM1-220ENST00000540805 IGSF10Q6WRI0 2623 aa4.09□□□□□ -1.76
PROM1-220ENST00000540805 NBPF19A0A087WUL8 3843 aa4.09□□□□□ -1.76
PROM1-220ENST00000540805 LOC107984156A0A0G2JMH3 177 aa4.09□□□□□ -1.76
PROM1-220ENST00000540805 MRPL51Q4U2R6 128 aaKnown RBP4.09□□□□□ -1.76
PROM1-220ENST00000540805 ARL17AQ8IVW1 177 aa4.09□□□□□ -1.76
PROM1-220ENST00000540805 Q8TAT8 98 aa4.09□□□□□ -1.76
PROM1-220ENST00000540805 MAP1LC3AQ9H492 121 aa4.09□□□□□ -1.76
PROM1-220ENST00000540805 XCL2Q9UBD3 114 aa4.09□□□□□ -1.76
PROM1-220ENST00000540805 ZNF469Q96JG9 3925 aaPredicted RBP4.08□□□□□ -1.76
PROM1-220ENST00000540805 UTP20O75691 2785 aaKnown RBP4.08□□□□□ -1.76
PROM1-220ENST00000540805 TRGV1A0A0A0MS02 117 aa4.08□□□□□ -1.76
PROM1-220ENST00000540805 TRAV12-3A0A0B4J271 114 aa4.08□□□□□ -1.76
PROM1-220ENST00000540805 F8W1H4 67 aa4.08□□□□□ -1.76
PROM1-220ENST00000540805 SMKR1H3BMG3 65 aa4.08□□□□□ -1.76
PROM1-220ENST00000540805 BUB1B-PAK6H3BSN5 160 aa4.08□□□□□ -1.76
PROM1-220ENST00000540805 CNTFRP26992 372 aa4.08□□□□□ -1.76
PROM1-220ENST00000540805 SMCPP49901 116 aaPredicted RBP4.08□□□□□ -1.76
PROM1-220ENST00000540805 DEFB131AP59861 70 aa4.08□□□□□ -1.76
PROM1-220ENST00000540805 TCTEX1D4Q5JR98 221 aa4.08□□□□□ -1.76
PROM1-220ENST00000540805 PIFOQ8TCI5 191 aa4.08□□□□□ -1.76
PROM1-220ENST00000540805 TRBV19A0A075B6N1 114 aa4.08□□□□□ -1.76
PROM1-220ENST00000540805 KNCNA6PVL3 124 aa4.08□□□□□ -1.76
PROM1-220ENST00000540805 SHISA9B4DS77 424 aa4.08□□□□□ -1.76
PROM1-220ENST00000540805 M0QXV9 152 aa4.08□□□□□ -1.76
PROM1-220ENST00000540805 NPYP01303 97 aa4.08□□□□□ -1.76
PROM1-220ENST00000540805 CFHR3Q02985 330 aa4.08□□□□□ -1.76
PROM1-220ENST00000540805 FOXI2Q6ZQN5 318 aa4.08□□□□□ -1.76
PROM1-220ENST00000540805 RHPN1-AS1Q9BWJ2 59 aa4.08□□□□□ -1.76
PROM1-220ENST00000540805 TMEM160Q9NX00 188 aa4.08□□□□□ -1.76
PROM1-220ENST00000540805 ERG28Q9UKR5 140 aa4.08□□□□□ -1.76
PROM1-220ENST00000540805 IGLV3-9A0A075B6K5 115 aa4.08□□□□□ -1.76
PROM1-220ENST00000540805 IGKV2-40A0A087WW87 121 aaPredicted RBP4.08□□□□□ -1.76
PROM1-220ENST00000540805 CRLF1O75462 422 aa4.08□□□□□ -1.76
PROM1-220ENST00000540805 GAS8-AS1O95177 125 aa4.08□□□□□ -1.76
PROM1-220ENST00000540805 IGKV2D-40P01614 121 aaPredicted RBP4.08□□□□□ -1.76
PROM1-220ENST00000540805 CRIP1P50238 77 aa4.08□□□□□ -1.76
PROM1-220ENST00000540805 SRSF1Q07955 248 aaKnown RBP eCLIP4.08□□□□□ -1.76
PROM1-220ENST00000540805 PVRIGQ6DKI7 326 aa4.08□□□□□ -1.76
PROM1-220ENST00000540805 Q6ZUT4 128 aa4.08□□□□□ -1.76
PROM1-220ENST00000540805 CEND1Q8N111 149 aa4.08□□□□□ -1.76
PROM1-220ENST00000540805 C8orf49Q96NF6 230 aa4.08□□□□□ -1.76
PROM1-220ENST00000540805 FOXC2Q99958 501 aa4.08□□□□□ -1.76
PROM1-220ENST00000540805 SIGLEC9Q9Y336 463 aa4.08□□□□□ -1.76
PROM1-220ENST00000540805 APOMO95445 188 aa4.07□□□□□ -1.76
PROM1-220ENST00000540805 IGKCP01834 107 aa4.07□□□□□ -1.76
PROM1-220ENST00000540805 SIGLEC15Q6ZMC9 328 aa4.07□□□□□ -1.76
PROM1-220ENST00000540805 LYPD1Q8N2G4 141 aa4.07□□□□□ -1.76
PROM1-220ENST00000540805 PHLDA1Q8WV24 401 aaPredicted RBP4.07□□□□□ -1.76
PROM1-220ENST00000540805 MAP1AP78559 2803 aaPredicted RBP4.07□□□□□ -1.76
PROM1-220ENST00000540805 TRBV25-1A0A075B6N4 114 aa4.07□□□□□ -1.76
PROM1-220ENST00000540805 IGHV4-61A0A0C4DH41 118 aa4.07□□□□□ -1.76
PROM1-220ENST00000540805 WI2-2373I1.2A0A1W2PRP0 233 aa4.07□□□□□ -1.76
PROM1-220ENST00000540805 FABP5P3A8MUU1 101 aa4.07□□□□□ -1.76
PROM1-220ENST00000540805 OR11H12B2RN74 326 aa4.07□□□□□ -1.76
PROM1-220ENST00000540805 IGLL5B9A064 214 aa4.07□□□□□ -1.76
PROM1-220ENST00000540805 E9PLD3 99 aa4.07□□□□□ -1.76
PROM1-220ENST00000540805 ATP6V0E1O15342 81 aa4.07□□□□□ -1.76
PROM1-220ENST00000540805 HOXA3O43365 443 aaPredicted RBP4.07□□□□□ -1.76
PROM1-220ENST00000540805 MRPL23Q16540 153 aaKnown RBP4.07□□□□□ -1.76
PROM1-220ENST00000540805 TEX36Q5VZQ5 186 aa4.07□□□□□ -1.76
PROM1-220ENST00000540805 ZFP2Q6ZN57 461 aa4.07□□□□□ -1.76
PROM1-220ENST00000540805 C17orf77Q96MU5 243 aa4.07□□□□□ -1.76
PROM1-220ENST00000540805 C11orf68Q9H3H3 251 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms