RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 DPF1Q92782 380 aa10.33□□□□□ -0.76
BNIP3-202ENST00000540159 CHAC1Q9BUX1 264 aa10.33□□□□□ -0.76
BNIP3-202ENST00000540159 TRBV25-1A0A075B6N4 114 aa10.33□□□□□ -0.76
BNIP3-202ENST00000540159 TRAV12-3A0A0B4J271 114 aa10.33□□□□□ -0.76
BNIP3-202ENST00000540159 A6NDN8 102 aa10.33□□□□□ -0.76
BNIP3-202ENST00000540159 HSD52Q0P140 79 aa10.33□□□□□ -0.76
BNIP3-202ENST00000540159 CLEC2AQ6UVW9 174 aa10.33□□□□□ -0.76
BNIP3-202ENST00000540159 F5H697 171 aa10.32□□□□□ -0.76
BNIP3-202ENST00000540159 OCIAD2Q56VL3 154 aa10.32□□□□□ -0.76
BNIP3-202ENST00000540159 U3KQE9 123 aa10.32□□□□□ -0.76
BNIP3-202ENST00000540159 SEC11AP67812 179 aa10.32□□□□□ -0.76
BNIP3-202ENST00000540159 C9orf139Q6ZV77 190 aa10.32□□□□□ -0.76
BNIP3-202ENST00000540159 OR1N2Q8NGR9 330 aa10.32□□□□□ -0.76
BNIP3-202ENST00000540159 RIPPLY3P57055 190 aa10.32□□□□□ -0.76
BNIP3-202ENST00000540159 RASL10AQ92737 203 aa10.32□□□□□ -0.76
BNIP3-202ENST00000540159 IGHV4-59P01825 116 aa10.31□□□□□ -0.76
BNIP3-202ENST00000540159 ASIPP42127 132 aa10.31□□□□□ -0.76
BNIP3-202ENST00000540159 SCGB3A1Q96QR1 104 aa10.31□□□□□ -0.76
BNIP3-202ENST00000540159 USP24Q9UPU5 2620 aa10.31□□□□□ -0.76
BNIP3-202ENST00000540159 LINC00477Q96M19 166 aa10.31□□□□□ -0.76
BNIP3-202ENST00000540159 SPCS1Q9Y6A9 102 aa10.31□□□□□ -0.76
BNIP3-202ENST00000540159 NBPF19A0A087WUL8 3843 aa10.3□□□□□ -0.76
BNIP3-202ENST00000540159 C9orf118A6NHY6 69 aa10.3□□□□□ -0.76
BNIP3-202ENST00000540159 FAM223BA6NKX1 122 aa10.3□□□□□ -0.76
BNIP3-202ENST00000540159 PRB1P04280 392 aa10.3□□□□□ -0.76
BNIP3-202ENST00000540159 FAM223AQ8IWN6 122 aa10.3□□□□□ -0.76
BNIP3-202ENST00000540159 SMIM2Q9BVW6 85 aa10.3□□□□□ -0.76
BNIP3-202ENST00000540159 TRAV21A0A0B4J279 112 aa10.3□□□□□ -0.76
BNIP3-202ENST00000540159 SUMO2P61956 95 aaKnown RBP10.3□□□□□ -0.76
BNIP3-202ENST00000540159 OR9G4Q8NGQ1 327 aa10.3□□□□□ -0.76
BNIP3-202ENST00000540159 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.3□□□□□ -0.76
BNIP3-202ENST00000540159 SRSF1Q07955 248 aaKnown RBP eCLIP10.3□□□□□ -0.76
BNIP3-202ENST00000540159 C10orf105Q8TEF2 133 aa10.3□□□□□ -0.76
BNIP3-202ENST00000540159 KLK9Q9UKQ9 250 aa10.3□□□□□ -0.76
BNIP3-202ENST00000540159 PRM2P04554 102 aa10.29□□□□□ -0.76
BNIP3-202ENST00000540159 CD7P09564 240 aa10.29□□□□□ -0.76
BNIP3-202ENST00000540159 ARL6IP6Q8N6S5 226 aa10.29□□□□□ -0.76
BNIP3-202ENST00000540159 NDUFA4O00483 81 aa10.29□□□□□ -0.76
BNIP3-202ENST00000540159 PSMG4Q5JS54 123 aa10.29□□□□□ -0.76
BNIP3-202ENST00000540159 MEGF9Q9H1U4 602 aa10.29□□□□□ -0.76
BNIP3-202ENST00000540159 MSMBP08118 114 aa10.28□□□□□ -0.76
BNIP3-202ENST00000540159 RPL39P62891 51 aaKnown RBP10.28□□□□□ -0.76
BNIP3-202ENST00000540159 CSTL1Q9H114 145 aa10.28□□□□□ -0.76
BNIP3-202ENST00000540159 PPP1R14DQ9NXH3 145 aa10.28□□□□□ -0.76
BNIP3-202ENST00000540159 H3BRM9 83 aa10.28□□□□□ -0.76
BNIP3-202ENST00000540159 RNASE3P12724 160 aaKnown RBP10.28□□□□□ -0.76
BNIP3-202ENST00000540159 AMTNQ6UX39 209 aa10.28□□□□□ -0.76
BNIP3-202ENST00000540159 CYSLTR1Q9Y271 337 aa10.28□□□□□ -0.76
BNIP3-202ENST00000540159 AKAP9Q99996 3911 aa10.28□□□□□ -0.76
BNIP3-202ENST00000540159 ATP5LO75964 103 aa10.27□□□□□ -0.76
BNIP3-202ENST00000540159 IGHG2P01859 326 aa10.27□□□□□ -0.76
BNIP3-202ENST00000540159 SRSF2Q01130 221 aaKnown RBP10.27□□□□□ -0.76
BNIP3-202ENST00000540159 C19orf54Q5BKX5 351 aa10.27□□□□□ -0.76
BNIP3-202ENST00000540159 C2orf66Q6UXQ4 117 aa10.27□□□□□ -0.76
BNIP3-202ENST00000540159 HIST1H4GQ99525 98 aa10.27□□□□□ -0.76
BNIP3-202ENST00000540159 ZNF256Q9Y2P7 627 aaPredicted RBP10.27□□□□□ -0.76
BNIP3-202ENST00000540159 SOCS3O14543 225 aa10.27□□□□□ -0.77
BNIP3-202ENST00000540159 DUSP14O95147 198 aaKnown RBP10.27□□□□□ -0.77
BNIP3-202ENST00000540159 CD300EQ496F6 205 aaPredicted RBP10.27□□□□□ -0.77
BNIP3-202ENST00000540159 SAMD5Q5TGI4 173 aa10.27□□□□□ -0.77
BNIP3-202ENST00000540159 DAZ1Q9NQZ3 744 aaKnown RBP10.27□□□□□ -0.77
BNIP3-202ENST00000540159 SMIM13P0DJ93 91 aa10.27□□□□□ -0.77
BNIP3-202ENST00000540159 RPL24P83731 157 aaKnown RBP10.27□□□□□ -0.77
BNIP3-202ENST00000540159 DEFB112Q30KQ8 113 aa10.27□□□□□ -0.77
BNIP3-202ENST00000540159 KLHL30-AS1Q8NEE0 82 aa10.27□□□□□ -0.77
BNIP3-202ENST00000540159 TMEM190Q8WZ59 177 aa10.27□□□□□ -0.77
BNIP3-202ENST00000540159 DPH3P1Q9H4G8 78 aa10.27□□□□□ -0.77
BNIP3-202ENST00000540159 A0A1W2PPM0 123 aa10.26□□□□□ -0.77
BNIP3-202ENST00000540159 SCGB2A2Q13296 93 aa10.26□□□□□ -0.77
BNIP3-202ENST00000540159 SPINK13Q1W4C9 94 aa10.26□□□□□ -0.77
BNIP3-202ENST00000540159 FAM159AQ6UWV7 190 aa10.26□□□□□ -0.77
BNIP3-202ENST00000540159 PRORYQ9H606 182 aa10.26□□□□□ -0.77
BNIP3-202ENST00000540159 CHTOPQ9Y3Y2 248 aaKnown RBP10.26□□□□□ -0.77
BNIP3-202ENST00000540159 A0A087WX48 190 aa10.26□□□□□ -0.77
BNIP3-202ENST00000540159 SYNJ2BPP57105 145 aa10.26□□□□□ -0.77
BNIP3-202ENST00000540159 DEFB136Q30KP8 78 aa10.26□□□□□ -0.77
BNIP3-202ENST00000540159 GTF2H5Q6ZYL4 71 aa10.26□□□□□ -0.77
BNIP3-202ENST00000540159 DUX3Q96PT4 197 aa10.26□□□□□ -0.77
BNIP3-202ENST00000540159 ZMAT4Q9H898 229 aa10.26□□□□□ -0.77
BNIP3-202ENST00000540159 IGHV3-73A0A0B4J1V6 119 aa10.25□□□□□ -0.77
BNIP3-202ENST00000540159 A6NDX4 124 aa10.25□□□□□ -0.77
BNIP3-202ENST00000540159 OVOL1O14753 267 aa10.25□□□□□ -0.77
BNIP3-202ENST00000540159 TGFAP01135 160 aa10.25□□□□□ -0.77
BNIP3-202ENST00000540159 OPRPNQ99935 248 aaPredicted RBP10.25□□□□□ -0.77
BNIP3-202ENST00000540159 MDFICQ9P1T7 246 aa10.25□□□□□ -0.77
BNIP3-202ENST00000540159 FABP2P12104 132 aa10.25□□□□□ -0.77
BNIP3-202ENST00000540159 K7EP34 96 aa10.24□□□□□ -0.77
BNIP3-202ENST00000540159 CDKN1BP46527 198 aa10.24□□□□□ -0.77
BNIP3-202ENST00000540159 MRPL53Q96EL3 112 aaKnown RBP10.24□□□□□ -0.77
BNIP3-202ENST00000540159 IGHV3-64A0A075B6Q5 118 aa10.24□□□□□ -0.77
BNIP3-202ENST00000540159 PRSS29PA6NIE9 313 aa10.23□□□□□ -0.77
BNIP3-202ENST00000540159 SMPXQ9UHP9 88 aa10.23□□□□□ -0.77
BNIP3-202ENST00000540159 TP53TG1Q9Y2A0 90 aa10.23□□□□□ -0.77
BNIP3-202ENST00000540159 OR11H12B2RN74 326 aa10.23□□□□□ -0.77
BNIP3-202ENST00000540159 UFSP1Q6NVU6 142 aa10.23□□□□□ -0.77
BNIP3-202ENST00000540159 CEND1Q8N111 149 aa10.23□□□□□ -0.77
BNIP3-202ENST00000540159 OR11H1Q8NG94 326 aa10.23□□□□□ -0.77
BNIP3-202ENST00000540159 OR11H2Q8NH07 326 aa10.23□□□□□ -0.77
BNIP3-202ENST00000540159 BAALCQ8WXS3 180 aa10.23□□□□□ -0.77
BNIP3-202ENST00000540159 FLNAP21333 2647 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms