RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 PLA2G5P39877 138 aa4.77□□□□□ -1.65
PTPRD-214ENST00000540109 ZNF295-AS1Q8N0V1 137 aa4.77□□□□□ -1.65
PTPRD-214ENST00000540109 TMEM178BH3BS89 294 aa4.77□□□□□ -1.65
PTPRD-214ENST00000540109 BSPH1Q075Z2 132 aa4.77□□□□□ -1.65
PTPRD-214ENST00000540109 NSUN5P1Q3KNT7 163 aa4.77□□□□□ -1.65
PTPRD-214ENST00000540109 C2orf66Q6UXQ4 117 aa4.77□□□□□ -1.65
PTPRD-214ENST00000540109 TMEM14BQ9NUH8 114 aa4.77□□□□□ -1.65
PTPRD-214ENST00000540109 BDP1A6H8Y1 2624 aa4.77□□□□□ -1.65
PTPRD-214ENST00000540109 CRYGBP07316 175 aa4.77□□□□□ -1.65
PTPRD-214ENST00000540109 TCL1BO95988 128 aa4.77□□□□□ -1.65
PTPRD-214ENST00000540109 UFSP1Q6NVU6 142 aa4.77□□□□□ -1.65
PTPRD-214ENST00000540109 Q8TAT8 98 aa4.77□□□□□ -1.65
PTPRD-214ENST00000540109 TIMM17AQ99595 171 aa4.77□□□□□ -1.65
PTPRD-214ENST00000540109 LINC00473A8K010 186 aa4.77□□□□□ -1.65
PTPRD-214ENST00000540109 PMS2P5A8MQ11 134 aa4.77□□□□□ -1.65
PTPRD-214ENST00000540109 F6UB75 175 aa4.77□□□□□ -1.65
PTPRD-214ENST00000540109 J3QQQ9 107 aa4.77□□□□□ -1.65
PTPRD-214ENST00000540109 Q8NA96 180 aa4.77□□□□□ -1.65
PTPRD-214ENST00000540109 DPM3Q9P2X0 92 aa4.77□□□□□ -1.65
PTPRD-214ENST00000540109 TRAV26-2A0A0B4J265 109 aa4.76□□□□□ -1.65
PTPRD-214ENST00000540109 SAA2P0DJI9 122 aaPredicted RBP4.76□□□□□ -1.65
PTPRD-214ENST00000540109 Q8N1Y9 231 aa4.76□□□□□ -1.65
PTPRD-214ENST00000540109 TEX49A0A1B0GTD5 131 aa4.76□□□□□ -1.65
PTPRD-214ENST00000540109 IGKV3-20P01619 116 aa4.76□□□□□ -1.65
PTPRD-214ENST00000540109 RNASE4P34096 147 aaKnown RBP4.76□□□□□ -1.65
PTPRD-214ENST00000540109 COX7CP15954 63 aa4.76□□□□□ -1.65
PTPRD-214ENST00000540109 ZFP2Q6ZN57 461 aa4.76□□□□□ -1.65
PTPRD-214ENST00000540109 SERP2Q8N6R1 65 aa4.76□□□□□ -1.65
PTPRD-214ENST00000540109 ZNRF1Q8ND25 227 aa4.76□□□□□ -1.65
PTPRD-214ENST00000540109 SHANK1Q9Y566 2161 aa4.76□□□□□ -1.65
PTPRD-214ENST00000540109 LINC00526Q96FQ7 95 aa4.76□□□□□ -1.65
PTPRD-214ENST00000540109 SIGLEC9Q9Y336 463 aa4.76□□□□□ -1.65
PTPRD-214ENST00000540109 GTF3C1Q12789 2109 aa4.76□□□□□ -1.65
PTPRD-214ENST00000540109 CACNA1HO95180 2353 aa4.76□□□□□ -1.65
PTPRD-214ENST00000540109 M0R1W7 72 aa4.76□□□□□ -1.65
PTPRD-214ENST00000540109 MSMPQ1L6U9 139 aa4.76□□□□□ -1.65
PTPRD-214ENST00000540109 C4orf26Q17RF5 130 aa4.75□□□□□ -1.65
PTPRD-214ENST00000540109 A0A1B0GXF2 115 aa4.75□□□□□ -1.65
PTPRD-214ENST00000540109 ADARB2-AS1A8MUL3 147 aa4.75□□□□□ -1.65
PTPRD-214ENST00000540109 FAM201AQ5SY85 155 aa4.75□□□□□ -1.65
PTPRD-214ENST00000540109 C8orf49Q96NF6 230 aa4.75□□□□□ -1.65
PTPRD-214ENST00000540109 TRBV19A0A075B6N1 114 aa4.75□□□□□ -1.65
PTPRD-214ENST00000540109 BAALC-AS2P0C853 105 aa4.75□□□□□ -1.65
PTPRD-214ENST00000540109 IGFL4Q6B9Z1 124 aa4.75□□□□□ -1.65
PTPRD-214ENST00000540109 C11orf86A6NJI1 115 aa4.75□□□□□ -1.65
PTPRD-214ENST00000540109 TNFRSF13BO14836 293 aaPredicted RBP4.75□□□□□ -1.65
PTPRD-214ENST00000540109 BRWD1-AS2P59051 145 aa4.75□□□□□ -1.65
PTPRD-214ENST00000540109 KLHL30-AS1Q8NEE0 82 aa4.75□□□□□ -1.65
PTPRD-214ENST00000540109 LINC00158P58513 81 aa4.74□□□□□ -1.65
PTPRD-214ENST00000540109 FAM120AOSQ5T036 256 aa4.74□□□□□ -1.65
PTPRD-214ENST00000540109 NRGNQ92686 78 aa4.74□□□□□ -1.65
PTPRD-214ENST00000540109 C14orf178Q8N769 122 aaPredicted RBP4.74□□□□□ -1.65
PTPRD-214ENST00000540109 FAM216BQ8N7L0 139 aa4.74□□□□□ -1.65
PTPRD-214ENST00000540109 ZNRF2Q8NHG8 242 aa4.74□□□□□ -1.65
PTPRD-214ENST00000540109 DSCR8Q96T75 97 aa4.74□□□□□ -1.65
PTPRD-214ENST00000540109 LAMA2P24043 3122 aaKnown RBP4.74□□□□□ -1.65
PTPRD-214ENST00000540109 PFN2P35080 140 aa4.74□□□□□ -1.65
PTPRD-214ENST00000540109 MINOS1Q5TGZ0 78 aa4.74□□□□□ -1.65
PTPRD-214ENST00000540109 MINOS1-NBL1R4GNA1 71 aa4.74□□□□□ -1.65
PTPRD-214ENST00000540109 NBR2O15453 112 aa4.74□□□□□ -1.65
PTPRD-214ENST00000540109 PRO0628Q9UI54 55 aa4.74□□□□□ -1.65
PTPRD-214ENST00000540109 TP53TG1Q9Y2A0 90 aa4.74□□□□□ -1.65
PTPRD-214ENST00000540109 SERP1Q9Y6X1 66 aa4.74□□□□□ -1.65
PTPRD-214ENST00000540109 TRBV30A0A0K0K1B3 111 aa4.73□□□□□ -1.65
PTPRD-214ENST00000540109 PAX4O43316 350 aa4.73□□□□□ -1.65
PTPRD-214ENST00000540109 C10orf55Q5SWW7 151 aa4.73□□□□□ -1.65
PTPRD-214ENST00000540109 C20orf197Q8N268 126 aa4.73□□□□□ -1.65
PTPRD-214ENST00000540109 CLEC2BQ92478 149 aa4.73□□□□□ -1.65
PTPRD-214ENST00000540109 TMEM133Q9H2Q1 129 aa4.73□□□□□ -1.65
PTPRD-214ENST00000540109 IGHV1-69P01742 117 aa4.73□□□□□ -1.65
PTPRD-214ENST00000540109 ZNF672Q499Z4 452 aaPredicted RBP4.73□□□□□ -1.65
PTPRD-214ENST00000540109 PRORYQ9H606 182 aa4.73□□□□□ -1.65
PTPRD-214ENST00000540109 SVILO95425 2214 aa4.73□□□□□ -1.65
PTPRD-214ENST00000540109 BUB3O43684 328 aa4.73□□□□□ -1.65
PTPRD-214ENST00000540109 TIMM17BO60830 172 aa4.73□□□□□ -1.65
PTPRD-214ENST00000540109 IGF2BP2-AS1Q96M15 143 aa4.73□□□□□ -1.65
PTPRD-214ENST00000540109 ESPL1Q14674 2120 aa4.73□□□□□ -1.65
PTPRD-214ENST00000540109 PSMB8P28062 276 aa4.73□□□□□ -1.65
PTPRD-214ENST00000540109 ZNF134P52741 427 aa4.73□□□□□ -1.65
PTPRD-214ENST00000540109 TMEM200BQ69YZ2 307 aa4.73□□□□□ -1.65
PTPRD-214ENST00000540109 C2orf91Q6ZV80 131 aa4.73□□□□□ -1.65
PTPRD-214ENST00000540109 ORMDL1Q9P0S3 153 aa4.73□□□□□ -1.65
PTPRD-214ENST00000540109 TRBV7-1A0A0A6YYK4 115 aa4.73□□□□□ -1.65
PTPRD-214ENST00000540109 E7EQL1 145 aa4.73□□□□□ -1.65
PTPRD-214ENST00000540109 SDIM1Q6ZPB5 146 aa4.73□□□□□ -1.65
PTPRD-214ENST00000540109 C1orf159Q96HA4 380 aa4.73□□□□□ -1.65
PTPRD-214ENST00000540109 NDUFA12Q9UI09 145 aa4.73□□□□□ -1.65
PTPRD-214ENST00000540109 PROP1O75360 226 aa4.72□□□□□ -1.65
PTPRD-214ENST00000540109 IL17DQ8TAD2 202 aa4.72□□□□□ -1.65
PTPRD-214ENST00000540109 CDH23Q9H251 3354 aa4.72□□□□□ -1.65
PTPRD-214ENST00000540109 IGHV3OR16-12A0A075B7B8 117 aa4.72□□□□□ -1.65
PTPRD-214ENST00000540109 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-214ENST00000540109 I3L3M4 83 aa4.72□□□□□ -1.65
PTPRD-214ENST00000540109 IGHV1-8P0DP01 117 aa4.72□□□□□ -1.65
PTPRD-214ENST00000540109 MUC7Q8TAX7 377 aa4.72□□□□□ -1.65
PTPRD-214ENST00000540109 MBD6Q96DN6 1003 aa4.72□□□□□ -1.65
PTPRD-214ENST00000540109 PRR25Q96S07 402 aa4.72□□□□□ -1.65
PTPRD-214ENST00000540109 JPT2Q9H910 190 aa4.72□□□□□ -1.65
PTPRD-214ENST00000540109 LOXP28300 417 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-214ENST00000540109 CFAP126Q5VTH2 177 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms