RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 IGKV2D-40P01614 121 aaPredicted RBP12.93□□□□□ -0.34
PCDHB17P-201ENST00000539533 CACNG7P62955 275 aa12.93□□□□□ -0.34
PCDHB17P-201ENST00000539533 SCGB2A2Q13296 93 aa12.93□□□□□ -0.34
PCDHB17P-201ENST00000539533 C8orf86Q6ZUL3 223 aa12.93□□□□□ -0.34
PCDHB17P-201ENST00000539533 RHPN1-AS1Q9BWJ2 59 aa12.93□□□□□ -0.34
PCDHB17P-201ENST00000539533 FLNBO75369 2602 aaKnown RBP12.93□□□□□ -0.34
PCDHB17P-201ENST00000539533 TRAV8-2A0A0B4J237 113 aa12.93□□□□□ -0.34
PCDHB17P-201ENST00000539533 HBDP02042 147 aa12.93□□□□□ -0.34
PCDHB17P-201ENST00000539533 FXYD7P58549 80 aa12.93□□□□□ -0.34
PCDHB17P-201ENST00000539533 HSD52Q0P140 79 aa12.93□□□□□ -0.34
PCDHB17P-201ENST00000539533 BOD1L2Q8IYS8 172 aa12.93□□□□□ -0.34
PCDHB17P-201ENST00000539533 SPCS1Q9Y6A9 102 aa12.93□□□□□ -0.34
PCDHB17P-201ENST00000539533 RNASE1P07998 156 aaKnown RBP12.92□□□□□ -0.34
PCDHB17P-201ENST00000539533 DEFB136Q30KP8 78 aa12.92□□□□□ -0.34
PCDHB17P-201ENST00000539533 HIVEP1P15822 2718 aa12.92□□□□□ -0.34
PCDHB17P-201ENST00000539533 PRAC2D3DTV9 90 aa12.92□□□□□ -0.34
PCDHB17P-201ENST00000539533 SAMD13Q5VXD3 122 aa12.92□□□□□ -0.34
PCDHB17P-201ENST00000539533 ZNF418Q8TF45 676 aaPredicted RBP12.92□□□□□ -0.34
PCDHB17P-201ENST00000539533 SLC50A1Q9BRV3 221 aa12.92□□□□□ -0.34
PCDHB17P-201ENST00000539533 SMPXQ9UHP9 88 aa12.92□□□□□ -0.34
PCDHB17P-201ENST00000539533 A0A1W2PPM0 123 aa12.91□□□□□ -0.34
PCDHB17P-201ENST00000539533 K7EMT4 169 aa12.91□□□□□ -0.34
PCDHB17P-201ENST00000539533 COX8CQ7Z4L0 72 aa12.91□□□□□ -0.34
PCDHB17P-201ENST00000539533 OR5A1Q8NGJ0 315 aa12.91□□□□□ -0.34
PCDHB17P-201ENST00000539533 VGLL1Q99990 258 aa12.91□□□□□ -0.34
PCDHB17P-201ENST00000539533 SYNJ2BPP57105 145 aa12.91□□□□□ -0.34
PCDHB17P-201ENST00000539533 HILS1P60008 231 aa12.91□□□□□ -0.34
PCDHB17P-201ENST00000539533 RPL11P62913 178 aaKnown RBP12.91□□□□□ -0.34
PCDHB17P-201ENST00000539533 IGKV3-7A0A075B6H7 116 aa12.9□□□□□ -0.34
PCDHB17P-201ENST00000539533 SMKR1H3BMG3 65 aa12.9□□□□□ -0.34
PCDHB17P-201ENST00000539533 HOXD3P31249 432 aaPredicted RBP12.9□□□□□ -0.34
PCDHB17P-201ENST00000539533 CKS2P33552 79 aa12.9□□□□□ -0.34
PCDHB17P-201ENST00000539533 KHDC1LQ5JSQ8 128 aa12.9□□□□□ -0.34
PCDHB17P-201ENST00000539533 OR9G4Q8NGQ1 327 aa12.9□□□□□ -0.34
PCDHB17P-201ENST00000539533 IFI27L1Q96BM0 104 aa12.9□□□□□ -0.34
PCDHB17P-201ENST00000539533 PRR25Q96S07 402 aa12.9□□□□□ -0.34
PCDHB17P-201ENST00000539533 SETD2Q9BYW2 2564 aaPredicted RBP12.9□□□□□ -0.34
PCDHB17P-201ENST00000539533 NPYP01303 97 aa12.89□□□□□ -0.35
PCDHB17P-201ENST00000539533 ADAMTSL5Q6ZMM2 481 aa12.89□□□□□ -0.35
PCDHB17P-201ENST00000539533 C16orf92Q96LL3 132 aa12.89□□□□□ -0.35
PCDHB17P-201ENST00000539533 UFC1Q9Y3C8 167 aa12.89□□□□□ -0.35
PCDHB17P-201ENST00000539533 TWIST1Q15672 202 aa12.89□□□□□ -0.35
PCDHB17P-201ENST00000539533 C11orf44Q8N8P7 122 aa12.89□□□□□ -0.35
PCDHB17P-201ENST00000539533 INAFM1C9JVW0 142 aa12.88□□□□□ -0.35
PCDHB17P-201ENST00000539533 RPL24P83731 157 aaKnown RBP12.88□□□□□ -0.35
PCDHB17P-201ENST00000539533 Q8TAT8 98 aa12.88□□□□□ -0.35
PCDHB17P-201ENST00000539533 SIVA1O15304 175 aa12.88□□□□□ -0.35
PCDHB17P-201ENST00000539533 SMIM17P0DL12 118 aa12.88□□□□□ -0.35
PCDHB17P-201ENST00000539533 ERCC8Q13216 396 aa12.88□□□□□ -0.35
PCDHB17P-201ENST00000539533 LINC01006Q8NI28 216 aa12.88□□□□□ -0.35
PCDHB17P-201ENST00000539533 DUX3Q96PT4 197 aa12.88□□□□□ -0.35
PCDHB17P-201ENST00000539533 FABP2P12104 132 aa12.87□□□□□ -0.35
PCDHB17P-201ENST00000539533 ZNF80P51504 273 aaPredicted RBP12.87□□□□□ -0.35
PCDHB17P-201ENST00000539533 C20orf173Q96LM9 149 aa12.87□□□□□ -0.35
PCDHB17P-201ENST00000539533 IGLC6P0CF74 106 aa12.87□□□□□ -0.35
PCDHB17P-201ENST00000539533 SLURP1P55000 103 aa12.87□□□□□ -0.35
PCDHB17P-201ENST00000539533 OR11H1Q8NG94 326 aa12.87□□□□□ -0.35
PCDHB17P-201ENST00000539533 SOCS3O14543 225 aa12.86□□□□□ -0.35
PCDHB17P-201ENST00000539533 BMI1P35226 326 aa12.86□□□□□ -0.35
PCDHB17P-201ENST00000539533 NMUP48645 174 aa12.86□□□□□ -0.35
PCDHB17P-201ENST00000539533 PCP2Q8IVA1 136 aa12.86□□□□□ -0.35
PCDHB17P-201ENST00000539533 C4orf3Q8WVX3 66 aa12.86□□□□□ -0.35
PCDHB17P-201ENST00000539533 NSD1Q96L73 2696 aaPredicted RBP12.86□□□□□ -0.35
PCDHB17P-201ENST00000539533 FBLL1A6NHQ2 334 aaKnown RBP12.86□□□□□ -0.35
PCDHB17P-201ENST00000539533 KLHL30-AS1Q8NEE0 82 aa12.86□□□□□ -0.35
PCDHB17P-201ENST00000539533 LGALS9O00182 355 aa12.85□□□□□ -0.35
PCDHB17P-201ENST00000539533 SAMD5Q5TGI4 173 aa12.85□□□□□ -0.35
PCDHB17P-201ENST00000539533 ZNF575Q86XF7 245 aa12.85□□□□□ -0.35
PCDHB17P-201ENST00000539533 WFDC3Q8IUB2 231 aa12.85□□□□□ -0.35
PCDHB17P-201ENST00000539533 C16orf95Q9H693 158 aa12.85□□□□□ -0.35
PCDHB17P-201ENST00000539533 DKK2Q9UBU2 259 aa12.85□□□□□ -0.35
PCDHB17P-201ENST00000539533 TEX48A0A1B0GUV7 120 aa12.85□□□□□ -0.35
PCDHB17P-201ENST00000539533 CD28P10747 220 aa12.85□□□□□ -0.35
PCDHB17P-201ENST00000539533 SETXQ7Z333 2677 aaKnown RBP12.84□□□□□ -0.35
PCDHB17P-201ENST00000539533 LINC01619G3V211 115 aa12.84□□□□□ -0.35
PCDHB17P-201ENST00000539533 SRSF2Q01130 221 aaKnown RBP12.84□□□□□ -0.35
PCDHB17P-201ENST00000539533 GTSF1LQ9H1H1 148 aa12.84□□□□□ -0.35
PCDHB17P-201ENST00000539533 AZU1P20160 251 aa12.84□□□□□ -0.35
PCDHB17P-201ENST00000539533 DEFB1P60022 68 aa12.84□□□□□ -0.35
PCDHB17P-201ENST00000539533 MRPL53Q96EL3 112 aaKnown RBP12.84□□□□□ -0.35
PCDHB17P-201ENST00000539533 RNF185Q96GF1 192 aa12.84□□□□□ -0.35
PCDHB17P-201ENST00000539533 AGPAT4-IT1Q9H0P7 198 aa12.84□□□□□ -0.35
PCDHB17P-201ENST00000539533 MAP1LC3AQ9H492 121 aa12.84□□□□□ -0.35
PCDHB17P-201ENST00000539533 MSRB1Q9NZV6 116 aa12.84□□□□□ -0.35
PCDHB17P-201ENST00000539533 SMIM13P0DJ93 91 aa12.83□□□□□ -0.36
PCDHB17P-201ENST00000539533 C18orf15Q96N68 181 aa12.83□□□□□ -0.36
PCDHB17P-201ENST00000539533 A0A1W2PRX2 142 aa12.83□□□□□ -0.36
PCDHB17P-201ENST00000539533 RBAKDNA6NC62 111 aa12.83□□□□□ -0.36
PCDHB17P-201ENST00000539533 ORM1P02763 201 aa12.83□□□□□ -0.36
PCDHB17P-201ENST00000539533 FN1P02751 2386 aaKnown RBP12.82□□□□□ -0.36
PCDHB17P-201ENST00000539533 LINC01546A6NGU7 62 aa12.81□□□□□ -0.36
PCDHB17P-201ENST00000539533 GAS8-AS1O95177 125 aa12.81□□□□□ -0.36
PCDHB17P-201ENST00000539533 GCSHP23434 173 aa12.81□□□□□ -0.36
PCDHB17P-201ENST00000539533 SMAGPQ0VAQ4 97 aa12.81□□□□□ -0.36
PCDHB17P-201ENST00000539533 CNFNQ9BYD5 112 aa12.81□□□□□ -0.36
PCDHB17P-201ENST00000539533 LEPP41159 167 aa12.81□□□□□ -0.36
PCDHB17P-201ENST00000539533 DCANP1Q8TF63 244 aa12.81□□□□□ -0.36
PCDHB17P-201ENST00000539533 SIGMAR1Q99720 223 aa12.81□□□□□ -0.36
PCDHB17P-201ENST00000539533 CITED2Q99967 270 aaPredicted RBP12.81□□□□□ -0.36
PCDHB17P-201ENST00000539533 DLX4Q92988 240 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms