RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 RS1O15537 224 aa11.94□□□□□ -0.5
GPN3-202ENST00000537466 S100A4P26447 101 aaKnown RBP11.94□□□□□ -0.5
GPN3-202ENST00000537466 CFAP126Q5VTH2 177 aa11.94□□□□□ -0.5
GPN3-202ENST00000537466 ALKAL2Q6UX46 152 aa11.94□□□□□ -0.5
GPN3-202ENST00000537466 PTH2Q96A98 100 aa11.94□□□□□ -0.5
GPN3-202ENST00000537466 DERL1Q9BUN8 251 aa11.94□□□□□ -0.5
GPN3-202ENST00000537466 MLST8Q9BVC4 326 aa11.94□□□□□ -0.5
GPN3-202ENST00000537466 GRIFINA4D1Z8 144 aa11.93□□□□□ -0.5
GPN3-202ENST00000537466 H3BVH4 76 aa11.93□□□□□ -0.5
GPN3-202ENST00000537466 K7EQD1 137 aa11.93□□□□□ -0.5
GPN3-202ENST00000537466 RPL35P42766 123 aaKnown RBP11.93□□□□□ -0.5
GPN3-202ENST00000537466 LINC01559Q495D7 138 aa11.93□□□□□ -0.5
GPN3-202ENST00000537466 BAGE2Q86Y30 109 aa11.93□□□□□ -0.5
GPN3-202ENST00000537466 C11orf52Q96A22 123 aa11.93□□□□□ -0.5
GPN3-202ENST00000537466 UPK3BQ9BT76 320 aa11.93□□□□□ -0.5
GPN3-202ENST00000537466 Q9H8V8 135 aa11.93□□□□□ -0.5
GPN3-202ENST00000537466 IL36BQ9NZH7 164 aa11.93□□□□□ -0.5
GPN3-202ENST00000537466 MRPS16Q9Y3D3 137 aaKnown RBP11.93□□□□□ -0.5
GPN3-202ENST00000537466 TMSB15BA0A087X1C1 80 aa11.92□□□□□ -0.5
GPN3-202ENST00000537466 NBDYA0A0U1RRE5 68 aa11.92□□□□□ -0.5
GPN3-202ENST00000537466 GYPEP15421 78 aa11.92□□□□□ -0.5
GPN3-202ENST00000537466 MRPL23Q16540 153 aaKnown RBP11.92□□□□□ -0.5
GPN3-202ENST00000537466 DNLZQ5SXM8 178 aa11.92□□□□□ -0.5
GPN3-202ENST00000537466 BOLA1Q9Y3E2 137 aa11.92□□□□□ -0.5
GPN3-202ENST00000537466 IGHV3-73A0A0B4J1V6 119 aa11.91□□□□□ -0.5
GPN3-202ENST00000537466 LOC100131303A0A0U1RQF7 123 aa11.91□□□□□ -0.5
GPN3-202ENST00000537466 GATA1P15976 413 aaPredicted RBP11.91□□□□□ -0.5
GPN3-202ENST00000537466 MEF2BQ02080 365 aaPredicted RBP11.91□□□□□ -0.5
GPN3-202ENST00000537466 ARMS2P0C7Q2 107 aa11.9□□□□□ -0.5
GPN3-202ENST00000537466 BCL2P10415 239 aa11.9□□□□□ -0.5
GPN3-202ENST00000537466 TXNDC17Q9BRA2 123 aa11.9□□□□□ -0.5
GPN3-202ENST00000537466 HECTD4Q9Y4D8 3996 aa11.9□□□□□ -0.5
GPN3-202ENST00000537466 IFNA1P01562 189 aa11.89□□□□□ -0.51
GPN3-202ENST00000537466 SRIP30626 198 aa11.89□□□□□ -0.51
GPN3-202ENST00000537466 RPL19P84098 196 aaKnown RBP11.89□□□□□ -0.51
GPN3-202ENST00000537466 LYPD5Q6UWN5 251 aa11.89□□□□□ -0.51
GPN3-202ENST00000537466 LINC00336Q6ZUF6 198 aa11.89□□□□□ -0.51
GPN3-202ENST00000537466 NEGR1Q7Z3B1 354 aa11.89□□□□□ -0.51
GPN3-202ENST00000537466 SLC25A29Q8N8R3 303 aa11.89□□□□□ -0.51
GPN3-202ENST00000537466 PCNPQ8WW12 178 aaKnown RBP11.89□□□□□ -0.51
GPN3-202ENST00000537466 JPT2Q9H910 190 aa11.89□□□□□ -0.51
GPN3-202ENST00000537466 C1orf134Q5TEV5 83 aa11.89□□□□□ -0.51
GPN3-202ENST00000537466 DMRTA1Q5VZB9 504 aa11.89□□□□□ -0.51
GPN3-202ENST00000537466 PRR27Q6MZM9 219 aa11.89□□□□□ -0.51
GPN3-202ENST00000537466 KRTAP1-5Q9BYS1 174 aa11.89□□□□□ -0.51
GPN3-202ENST00000537466 PARLQ9H300 379 aa11.89□□□□□ -0.51
GPN3-202ENST00000537466 RAB19A4D1S5 217 aa11.88□□□□□ -0.51
GPN3-202ENST00000537466 CIDEAO60543 219 aa11.88□□□□□ -0.51
GPN3-202ENST00000537466 IGLV2-8P01709 118 aa11.88□□□□□ -0.51
GPN3-202ENST00000537466 CENPWQ5EE01 88 aa11.88□□□□□ -0.51
GPN3-202ENST00000537466 PIK3CD-AS1Q5SR53 167 aa11.88□□□□□ -0.51
GPN3-202ENST00000537466 SCRT2Q9NQ03 307 aa11.88□□□□□ -0.51
GPN3-202ENST00000537466 VAX2Q9UIW0 290 aa11.88□□□□□ -0.51
GPN3-202ENST00000537466 PRSS29PA6NIE9 313 aa11.87□□□□□ -0.51
GPN3-202ENST00000537466 A8MWV9 139 aa11.87□□□□□ -0.51
GPN3-202ENST00000537466 PDE6DO43924 150 aa11.87□□□□□ -0.51
GPN3-202ENST00000537466 SAMD10Q9BYL1 202 aa11.87□□□□□ -0.51
GPN3-202ENST00000537466 TRBV6-4A0A1B0GX49 114 aa11.86□□□□□ -0.51
GPN3-202ENST00000537466 NXPH4O95158 308 aa11.86□□□□□ -0.51
GPN3-202ENST00000537466 Q6ZSN1 163 aa11.86□□□□□ -0.51
GPN3-202ENST00000537466 MED9Q9NWA0 146 aa11.86□□□□□ -0.51
GPN3-202ENST00000537466 PHLDA3Q9Y5J5 127 aa11.86□□□□□ -0.51
GPN3-202ENST00000537466 PKD1P98161 4303 aa11.85□□□□□ -0.51
GPN3-202ENST00000537466 TRBV20OR9-2A0A075B6H5 130 aa11.85□□□□□ -0.51
GPN3-202ENST00000537466 BLOC1S1P78537 153 aa11.85□□□□□ -0.51
GPN3-202ENST00000537466 UFSP1Q6NVU6 142 aa11.85□□□□□ -0.51
GPN3-202ENST00000537466 SYT8Q8NBV8 401 aa11.85□□□□□ -0.51
GPN3-202ENST00000537466 A0A1B0GVY2 172 aa11.84□□□□□ -0.51
GPN3-202ENST00000537466 M0R381 172 aa11.84□□□□□ -0.51
GPN3-202ENST00000537466 SIVA1O15304 175 aa11.84□□□□□ -0.51
GPN3-202ENST00000537466 MGST1P10620 155 aaKnown RBP11.84□□□□□ -0.51
GPN3-202ENST00000537466 RHOHQ15669 191 aa11.84□□□□□ -0.51
GPN3-202ENST00000537466 SOHLH1Q5JUK2 328 aa11.84□□□□□ -0.51
GPN3-202ENST00000537466 ZFP2Q6ZN57 461 aa11.84□□□□□ -0.51
GPN3-202ENST00000537466 C6orf223Q8N319 242 aa11.84□□□□□ -0.51
GPN3-202ENST00000537466 LYPD6BQ8NI32 183 aa11.84□□□□□ -0.51
GPN3-202ENST00000537466 PRADC1Q9BSG0 188 aa11.84□□□□□ -0.51
GPN3-202ENST00000537466 CXCL1P09341 107 aa11.83□□□□□ -0.52
GPN3-202ENST00000537466 TAGLN2P37802 199 aaKnown RBP11.83□□□□□ -0.52
GPN3-202ENST00000537466 GNG4P50150 75 aa11.83□□□□□ -0.52
GPN3-202ENST00000537466 MED14OSP0DP75 135 aa11.83□□□□□ -0.52
GPN3-202ENST00000537466 TTC32Q5I0X7 151 aa11.83□□□□□ -0.52
GPN3-202ENST00000537466 ZFP82Q8N141 532 aa11.83□□□□□ -0.52
GPN3-202ENST00000537466 SFRP2Q96HF1 295 aa11.83□□□□□ -0.52
GPN3-202ENST00000537466 A0A087WWL8 130 aa11.82□□□□□ -0.52
GPN3-202ENST00000537466 A0A1W2PPQ1 181 aa11.82□□□□□ -0.52
GPN3-202ENST00000537466 FAM74A4Q5TZK3 123 aa11.82□□□□□ -0.52
GPN3-202ENST00000537466 WFDC10BQ8IUB3 73 aa11.82□□□□□ -0.52
GPN3-202ENST00000537466 OR10AG1Q8NH19 301 aa11.82□□□□□ -0.52
GPN3-202ENST00000537466 SMIM12Q96EX1 92 aa11.82□□□□□ -0.52
GPN3-202ENST00000537466 Q9UF83 564 aa11.82□□□□□ -0.52
GPN3-202ENST00000537466 C19orf71A6NCJ1 209 aa11.81□□□□□ -0.52
GPN3-202ENST00000537466 RBFOX3A6NFN3 312 aa11.81□□□□□ -0.52
GPN3-202ENST00000537466 SNAI2O43623 268 aa11.81□□□□□ -0.52
GPN3-202ENST00000537466 CRYGDP07320 174 aa11.81□□□□□ -0.52
GPN3-202ENST00000537466 SH2D6Q7Z4S9 175 aa11.81□□□□□ -0.52
GPN3-202ENST00000537466 C14orf178Q8N769 122 aaPredicted RBP11.81□□□□□ -0.52
GPN3-202ENST00000537466 MUC21A0A0G2JKD1 596 aa11.8□□□□□ -0.52
GPN3-202ENST00000537466 MUC21A0A140T8X8 626 aa11.8□□□□□ -0.52
GPN3-202ENST00000537466 SSBP4Q9BWG4 385 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms