RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 WI2-2373I1.2A0A1W2PRP0 233 aa4.2□□□□□ -1.74
PTPRD-213ENST00000537002 KLK9Q9UKQ9 250 aa4.2□□□□□ -1.74
PTPRD-213ENST00000537002 IGKV2D-26A0A0A0MRZ7 120 aa4.2□□□□□ -1.74
PTPRD-213ENST00000537002 TRAV25A0A0B4J276 109 aa4.2□□□□□ -1.74
PTPRD-213ENST00000537002 PRB1P04280 392 aa4.2□□□□□ -1.74
PTPRD-213ENST00000537002 SDK1Q7Z5N4 2213 aa4.2□□□□□ -1.74
PTPRD-213ENST00000537002 BAALC-AS2P0C853 105 aa4.19□□□□□ -1.74
PTPRD-213ENST00000537002 ZFP2Q6ZN57 461 aa4.19□□□□□ -1.74
PTPRD-213ENST00000537002 VMO1Q7Z5L0 202 aa4.19□□□□□ -1.74
PTPRD-213ENST00000537002 MRPL53Q96EL3 112 aaKnown RBP4.19□□□□□ -1.74
PTPRD-213ENST00000537002 I3L3M4 83 aa4.19□□□□□ -1.74
PTPRD-213ENST00000537002 IGLV2-11P01706 119 aa4.19□□□□□ -1.74
PTPRD-213ENST00000537002 IGHV3-53P01767 116 aa4.19□□□□□ -1.74
PTPRD-213ENST00000537002 LINC00643Q86TS7 51 aa4.19□□□□□ -1.74
PTPRD-213ENST00000537002 LINC00526Q96FQ7 95 aa4.19□□□□□ -1.74
PTPRD-213ENST00000537002 DYSFO75923 2080 aa4.19□□□□□ -1.74
PTPRD-213ENST00000537002 TRGV2A0A075B6R0 118 aa4.19□□□□□ -1.74
PTPRD-213ENST00000537002 FSTL3O95633 263 aa4.19□□□□□ -1.74
PTPRD-213ENST00000537002 IGHV4-4A0A075B6R2 117 aa4.19□□□□□ -1.74
PTPRD-213ENST00000537002 FOXE3Q13461 319 aa4.19□□□□□ -1.74
PTPRD-213ENST00000537002 C11orf53Q8IXP5 236 aa4.19□□□□□ -1.74
PTPRD-213ENST00000537002 Q8N1Y9 231 aa4.19□□□□□ -1.74
PTPRD-213ENST00000537002 TMEM86BQ8N661 226 aa4.19□□□□□ -1.74
PTPRD-213ENST00000537002 ZNF491Q8N8L2 437 aa4.19□□□□□ -1.74
PTPRD-213ENST00000537002 IGKV1D-37A0A075B6S9 117 aa4.19□□□□□ -1.74
PTPRD-213ENST00000537002 IGHV3-38A0A0C4DH36 116 aa4.19□□□□□ -1.74
PTPRD-213ENST00000537002 PEMTQ9UBM1 199 aa4.19□□□□□ -1.74
PTPRD-213ENST00000537002 AHCTF1Q8WYP5 2266 aa4.19□□□□□ -1.74
PTPRD-213ENST00000537002 MED14OSP0DP75 135 aa4.19□□□□□ -1.74
PTPRD-213ENST00000537002 HAMPP81172 84 aa4.19□□□□□ -1.74
PTPRD-213ENST00000537002 SLC25A29Q8N8R3 303 aa4.19□□□□□ -1.74
PTPRD-213ENST00000537002 MRPL36Q9P0J6 103 aaKnown RBP4.19□□□□□ -1.74
PTPRD-213ENST00000537002 DNAJC13O75165 2243 aa4.19□□□□□ -1.74
PTPRD-213ENST00000537002 TEX49A0A1B0GTD5 131 aa4.19□□□□□ -1.74
PTPRD-213ENST00000537002 RBM3P98179 157 aaKnown RBP4.19□□□□□ -1.74
PTPRD-213ENST00000537002 C3orf22Q8N5N4 141 aa4.19□□□□□ -1.74
PTPRD-213ENST00000537002 VPREB3Q9UKI3 123 aa4.19□□□□□ -1.74
PTPRD-213ENST00000537002 A0A0J9YX75 114 aa4.18□□□□□ -1.74
PTPRD-213ENST00000537002 LGALS9O00182 355 aa4.18□□□□□ -1.74
PTPRD-213ENST00000537002 RNASE6Q93091 150 aaKnown RBP4.18□□□□□ -1.74
PTPRD-213ENST00000537002 TRBV30A0A0K0K1B3 111 aa4.18□□□□□ -1.74
PTPRD-213ENST00000537002 MAPKAPK5-AS1Q8N8E1 139 aa4.18□□□□□ -1.74
PTPRD-213ENST00000537002 MALP21145 153 aa4.18□□□□□ -1.74
PTPRD-213ENST00000537002 ZNF415Q09FC8 603 aa4.18□□□□□ -1.74
PTPRD-213ENST00000537002 SPRNQ5BIV9 151 aa4.18□□□□□ -1.74
PTPRD-213ENST00000537002 BAALCQ8WXS3 180 aa4.18□□□□□ -1.74
PTPRD-213ENST00000537002 TOMM6Q96B49 74 aa4.18□□□□□ -1.74
PTPRD-213ENST00000537002 TIMM17AQ99595 171 aa4.18□□□□□ -1.74
PTPRD-213ENST00000537002 AGPAT4-IT1Q9H0P7 198 aa4.18□□□□□ -1.74
PTPRD-213ENST00000537002 FREM1Q5H8C1 2179 aa4.18□□□□□ -1.74
PTPRD-213ENST00000537002 DAND5Q8N907 189 aa4.18□□□□□ -1.74
PTPRD-213ENST00000537002 SMIM9A6NGZ8 99 aa4.18□□□□□ -1.74
PTPRD-213ENST00000537002 GNRH2O43555 120 aa4.18□□□□□ -1.74
PTPRD-213ENST00000537002 DOCK7Q96N67 2140 aa4.18□□□□□ -1.74
PTPRD-213ENST00000537002 RHPN1-AS1Q9BWJ2 59 aa4.18□□□□□ -1.74
PTPRD-213ENST00000537002 ABCA1O95477 2261 aa4.17□□□□□ -1.74
PTPRD-213ENST00000537002 C11orf86A6NJI1 115 aa4.17□□□□□ -1.74
PTPRD-213ENST00000537002 NDUFC2-KCTD14E9PQ53 114 aa4.17□□□□□ -1.74
PTPRD-213ENST00000537002 PFN2P35080 140 aa4.17□□□□□ -1.74
PTPRD-213ENST00000537002 NFE4Q86UQ8 179 aa4.17□□□□□ -1.74
PTPRD-213ENST00000537002 UBL5Q9BZL1 73 aa4.17□□□□□ -1.74
PTPRD-213ENST00000537002 TPRP12270 2363 aaKnown RBP4.17□□□□□ -1.74
PTPRD-213ENST00000537002 PTPRSQ13332 1948 aa4.17□□□□□ -1.74
PTPRD-213ENST00000537002 TRAV4A0A0B4J268 109 aa4.17□□□□□ -1.74
PTPRD-213ENST00000537002 HOXD3P31249 432 aaPredicted RBP4.17□□□□□ -1.74
PTPRD-213ENST00000537002 RP1L1Q8IWN7 2480 aaPredicted RBP4.17□□□□□ -1.74
PTPRD-213ENST00000537002 A0A0J9YXV3 536 aa4.17□□□□□ -1.74
PTPRD-213ENST00000537002 RPL39P62891 51 aaKnown RBP4.17□□□□□ -1.74
PTPRD-213ENST00000537002 JPT2Q9H910 190 aa4.17□□□□□ -1.74
PTPRD-213ENST00000537002 IGHV3-16A0A0C4DH30 117 aa4.17□□□□□ -1.74
PTPRD-213ENST00000537002 A0A0J9YXY3 114 aa4.17□□□□□ -1.74
PTPRD-213ENST00000537002 CRLF1O75462 422 aa4.17□□□□□ -1.74
PTPRD-213ENST00000537002 NHLRC4P0CG21 123 aaPredicted RBP4.17□□□□□ -1.74
PTPRD-213ENST00000537002 HERVK_113P63121 156 aa4.17□□□□□ -1.74
PTPRD-213ENST00000537002 DEFB121Q5J5C9 76 aa4.17□□□□□ -1.74
PTPRD-213ENST00000537002 CSDC2Q9Y534 153 aaKnown RBP4.17□□□□□ -1.74
PTPRD-213ENST00000537002 CEP290O15078 2479 aa4.17□□□□□ -1.74
PTPRD-213ENST00000537002 TRAV12-2A0A075B6T6 113 aa4.17□□□□□ -1.74
PTPRD-213ENST00000537002 CRYGBP07316 175 aa4.17□□□□□ -1.74
PTPRD-213ENST00000537002 NEXN-AS1Q8NBZ9 246 aa4.17□□□□□ -1.74
PTPRD-213ENST00000537002 NAV3Q8IVL0 2385 aa4.17□□□□□ -1.74
PTPRD-213ENST00000537002 MDS2Q8NDY4 140 aa4.17□□□□□ -1.74
PTPRD-213ENST00000537002 OVOL3O00110 214 aa4.16□□□□□ -1.74
PTPRD-213ENST00000537002 ATP6V0E1O15342 81 aa4.16□□□□□ -1.74
PTPRD-213ENST00000537002 LOXP28300 417 aaPredicted RBP4.16□□□□□ -1.74
PTPRD-213ENST00000537002 PIP4P2Q8N4L2 257 aa4.16□□□□□ -1.74
PTPRD-213ENST00000537002 ARFGEF3Q5TH69 2177 aa4.16□□□□□ -1.74
PTPRD-213ENST00000537002 TRBV7-1A0A0A6YYK4 115 aa4.16□□□□□ -1.74
PTPRD-213ENST00000537002 F6UB75 175 aa4.16□□□□□ -1.74
PTPRD-213ENST00000537002 LHBP01229 141 aa4.16□□□□□ -1.74
PTPRD-213ENST00000537002 AJUBAQ96IF1 538 aa4.16□□□□□ -1.74
PTPRD-213ENST00000537002 TRGV1A0A0A0MS02 117 aa4.16□□□□□ -1.74
PTPRD-213ENST00000537002 CRYGAP11844 174 aa4.16□□□□□ -1.74
PTPRD-213ENST00000537002 WT1P19544 449 aaPredicted RBP4.16□□□□□ -1.74
PTPRD-213ENST00000537002 PRAC2D3DTV9 90 aa4.16□□□□□ -1.74
PTPRD-213ENST00000537002 SUMO4Q6EEV6 95 aa4.16□□□□□ -1.74
PTPRD-213ENST00000537002 FAM110DQ8TAY7 271 aaPredicted RBP4.16□□□□□ -1.74
PTPRD-213ENST00000537002 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.16□□□□□ -1.74
PTPRD-213ENST00000537002 E7EUB6 86 aa4.16□□□□□ -1.74
PTPRD-213ENST00000537002 G3V318 75 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms