RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 CRYBA4P53673 196 aa15.81■□□□□ 0.12
SFSWAP-204ENST00000535399 RNF212Q495C1 297 aa15.81■□□□□ 0.12
SFSWAP-204ENST00000535399 ZNF506Q5JVG8 444 aa15.81■□□□□ 0.12
SFSWAP-204ENST00000535399 OR4C5Q8NGB2 326 aa15.81■□□□□ 0.12
SFSWAP-204ENST00000535399 PRO0255Q9UI72 69 aa15.81■□□□□ 0.12
SFSWAP-204ENST00000535399 TRBV20OR9-2A0A075B6H5 130 aa15.8■□□□□ 0.12
SFSWAP-204ENST00000535399 TRGV4A0A0C4DH28 118 aa15.8■□□□□ 0.12
SFSWAP-204ENST00000535399 H3BVH4 76 aa15.8■□□□□ 0.12
SFSWAP-204ENST00000535399 PAX4O43316 350 aa15.8■□□□□ 0.12
SFSWAP-204ENST00000535399 SLAQ13239 276 aa15.8■□□□□ 0.12
SFSWAP-204ENST00000535399 TEX261Q6UWH6 196 aa15.8■□□□□ 0.12
SFSWAP-204ENST00000535399 UBE2DNLQ8IWF7 75 aa15.8■□□□□ 0.12
SFSWAP-204ENST00000535399 HHLA3Q9XRX5 114 aa15.8■□□□□ 0.12
SFSWAP-204ENST00000535399 RS1O15537 224 aa15.79■□□□□ 0.12
SFSWAP-204ENST00000535399 ARMS2P0C7Q2 107 aa15.79■□□□□ 0.12
SFSWAP-204ENST00000535399 GNG4P50150 75 aa15.79■□□□□ 0.12
SFSWAP-204ENST00000535399 PRR27Q6MZM9 219 aa15.79■□□□□ 0.12
SFSWAP-204ENST00000535399 SMIM12Q96EX1 92 aa15.79■□□□□ 0.12
SFSWAP-204ENST00000535399 A0A096LPF7 62 aa15.78■□□□□ 0.12
SFSWAP-204ENST00000535399 RPL19P84098 196 aaKnown RBP15.78■□□□□ 0.12
SFSWAP-204ENST00000535399 PIK3CD-AS1Q5SR53 167 aa15.78■□□□□ 0.12
SFSWAP-204ENST00000535399 CFAP126Q5VTH2 177 aa15.78■□□□□ 0.12
SFSWAP-204ENST00000535399 SCRT2Q9NQ03 307 aa15.78■□□□□ 0.12
SFSWAP-204ENST00000535399 CXCL1P09341 107 aa15.77■□□□□ 0.12
SFSWAP-204ENST00000535399 TMEM250H0YL14 139 aa15.76■□□□□ 0.11
SFSWAP-204ENST00000535399 MGST1P10620 155 aaKnown RBP15.76■□□□□ 0.11
SFSWAP-204ENST00000535399 TOR2AQ5JU69 321 aa15.76■□□□□ 0.11
SFSWAP-204ENST00000535399 LINC00588Q9Y4M8 146 aa15.76■□□□□ 0.11
SFSWAP-204ENST00000535399 CCL18P55774 89 aa15.75■□□□□ 0.11
SFSWAP-204ENST00000535399 FAM3BP58499 235 aaPredicted RBP15.75■□□□□ 0.11
SFSWAP-204ENST00000535399 DMRTA1Q5VZB9 504 aa15.75■□□□□ 0.11
SFSWAP-204ENST00000535399 PCNPQ8WW12 178 aaKnown RBP15.75■□□□□ 0.11
SFSWAP-204ENST00000535399 FAM210AQ96ND0 272 aa15.75■□□□□ 0.11
SFSWAP-204ENST00000535399 C19orf71A6NCJ1 209 aa15.74■□□□□ 0.11
SFSWAP-204ENST00000535399 MED14OSP0DP75 135 aa15.74■□□□□ 0.11
SFSWAP-204ENST00000535399 GATA1P15976 413 aaPredicted RBP15.74■□□□□ 0.11
SFSWAP-204ENST00000535399 PARLQ9H300 379 aa15.74■□□□□ 0.11
SFSWAP-204ENST00000535399 ICOSQ9Y6W8 199 aa15.74■□□□□ 0.11
SFSWAP-204ENST00000535399 CIDEAO60543 219 aa15.73■□□□□ 0.11
SFSWAP-204ENST00000535399 NDUFS6O75380 124 aaKnown RBP15.73■□□□□ 0.11
SFSWAP-204ENST00000535399 ESRGQ1W209 222 aa15.73■□□□□ 0.11
SFSWAP-204ENST00000535399 EIF5A2Q9GZV4 153 aaKnown RBP15.73■□□□□ 0.11
SFSWAP-204ENST00000535399 A8MWV9 139 aa15.72■□□□□ 0.11
SFSWAP-204ENST00000535399 SYT8Q8NBV8 401 aa15.72■□□□□ 0.11
SFSWAP-204ENST00000535399 JPT2Q9H910 190 aa15.72■□□□□ 0.11
SFSWAP-204ENST00000535399 PHLDA3Q9Y5J5 127 aa15.72■□□□□ 0.11
SFSWAP-204ENST00000535399 DNAH10Q8IVF4 4471 aa15.71■□□□□ 0.11
SFSWAP-204ENST00000535399 IGHV3-73A0A0B4J1V6 119 aa15.71■□□□□ 0.11
SFSWAP-204ENST00000535399 ZNRF2Q8NHG8 242 aa15.71■□□□□ 0.11
SFSWAP-204ENST00000535399 DAZAP1Q96EP5 407 aaKnown RBP15.71■□□□□ 0.11
SFSWAP-204ENST00000535399 BIN3Q9NQY0 253 aa15.71■□□□□ 0.11
SFSWAP-204ENST00000535399 K7EQD1 137 aa15.7■□□□□ 0.1
SFSWAP-204ENST00000535399 GYPEP15421 78 aa15.7■□□□□ 0.1
SFSWAP-204ENST00000535399 MRPL23Q16540 153 aaKnown RBP15.7■□□□□ 0.1
SFSWAP-204ENST00000535399 UFSP1Q6NVU6 142 aa15.7■□□□□ 0.1
SFSWAP-204ENST00000535399 OCC1Q8TAD7 63 aa15.7■□□□□ 0.1
SFSWAP-204ENST00000535399 SSBP4Q9BWG4 385 aaPredicted RBP15.7■□□□□ 0.1
SFSWAP-204ENST00000535399 SAMD10Q9BYL1 202 aa15.7■□□□□ 0.1
SFSWAP-204ENST00000535399 NACAE9PAV3 2078 aa15.69■□□□□ 0.1
SFSWAP-204ENST00000535399 IGLV2-18A0A075B6J9 118 aa15.69■□□□□ 0.1
SFSWAP-204ENST00000535399 LOC100131303A0A0U1RQF7 123 aa15.69■□□□□ 0.1
SFSWAP-204ENST00000535399 K7EN84 100 aa15.69■□□□□ 0.1
SFSWAP-204ENST00000535399 M0R381 172 aa15.69■□□□□ 0.1
SFSWAP-204ENST00000535399 SNAI2O43623 268 aa15.69■□□□□ 0.1
SFSWAP-204ENST00000535399 ZFP2Q6ZN57 461 aa15.69■□□□□ 0.1
SFSWAP-204ENST00000535399 ZFP82Q8N141 532 aa15.69■□□□□ 0.1
SFSWAP-204ENST00000535399 OR2D3Q8NGH3 330 aa15.69■□□□□ 0.1
SFSWAP-204ENST00000535399 NXPH4O95158 308 aa15.68■□□□□ 0.1
SFSWAP-204ENST00000535399 SRP19P09132 144 aaKnown RBP15.68■□□□□ 0.1
SFSWAP-204ENST00000535399 Q6ZSN1 163 aa15.68■□□□□ 0.1
SFSWAP-204ENST00000535399 SLC25A29Q8N8R3 303 aa15.68■□□□□ 0.1
SFSWAP-204ENST00000535399 OR10AG1Q8NH19 301 aa15.68■□□□□ 0.1
SFSWAP-204ENST00000535399 MRPS16Q9Y3D3 137 aaKnown RBP15.68■□□□□ 0.1
SFSWAP-204ENST00000535399 TRBV6-4A0A1B0GX49 114 aa15.67■□□□□ 0.1
SFSWAP-204ENST00000535399 M0R2N4 97 aa15.67■□□□□ 0.1
SFSWAP-204ENST00000535399 P01737 135 aa15.67■□□□□ 0.1
SFSWAP-204ENST00000535399 OR5AL1P0C617 328 aa15.67■□□□□ 0.1
SFSWAP-204ENST00000535399 CEBPGP53567 150 aa15.67■□□□□ 0.1
SFSWAP-204ENST00000535399 RPS20P60866 119 aaKnown RBP15.67■□□□□ 0.1
SFSWAP-204ENST00000535399 SFRP2Q96HF1 295 aa15.67■□□□□ 0.1
SFSWAP-204ENST00000535399 UPK3BQ9BT76 320 aa15.67■□□□□ 0.1
SFSWAP-204ENST00000535399 GZMBP10144 247 aa15.66■□□□□ 0.1
SFSWAP-204ENST00000535399 SRIP30626 198 aa15.66■□□□□ 0.1
SFSWAP-204ENST00000535399 Q6ZR54 194 aa15.66■□□□□ 0.1
SFSWAP-204ENST00000535399 NEGR1Q7Z3B1 354 aa15.66■□□□□ 0.1
SFSWAP-204ENST00000535399 NUDT10Q8NFP7 164 aa15.66■□□□□ 0.1
SFSWAP-204ENST00000535399 NUDT11Q96G61 164 aa15.66■□□□□ 0.1
SFSWAP-204ENST00000535399 RHOHQ15669 191 aa15.65■□□□□ 0.1
SFSWAP-204ENST00000535399 PRADC1Q9BSG0 188 aa15.65■□□□□ 0.1
SFSWAP-204ENST00000535399 MUC21A0A0G2JKD1 596 aa15.64■□□□□ 0.09
SFSWAP-204ENST00000535399 MUC21A0A140T8X8 626 aa15.64■□□□□ 0.09
SFSWAP-204ENST00000535399 C9JQL5 133 aa15.64■□□□□ 0.09
SFSWAP-204ENST00000535399 RHODO00212 210 aa15.64■□□□□ 0.09
SFSWAP-204ENST00000535399 CRYGDP07320 174 aa15.64■□□□□ 0.09
SFSWAP-204ENST00000535399 IGLC6P0CF74 106 aa15.64■□□□□ 0.09
SFSWAP-204ENST00000535399 LYPD5Q6UWN5 251 aa15.64■□□□□ 0.09
SFSWAP-204ENST00000535399 RNASE7Q9H1E1 156 aaKnown RBP15.64■□□□□ 0.09
SFSWAP-204ENST00000535399 DNAH2Q9P225 4427 aa15.64■□□□□ 0.09
SFSWAP-204ENST00000535399 A0A087WWL8 130 aa15.63■□□□□ 0.09
SFSWAP-204ENST00000535399 FER1L6-AS1Q8NA97 138 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms