RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 ZNF876PQ49A33 203 aa7.09□□□□□ -1.27
CSDE1-217ENST00000534699 CFAP126Q5VTH2 177 aa7.09□□□□□ -1.27
CSDE1-217ENST00000534699 Q86TA4 180 aa7.09□□□□□ -1.27
CSDE1-217ENST00000534699 AKAP14Q86UN6 197 aa7.09□□□□□ -1.27
CSDE1-217ENST00000534699 CYTL1Q9NRR1 136 aa7.09□□□□□ -1.27
CSDE1-217ENST00000534699 MAP1LC3B2A6NCE7 125 aa7.08□□□□□ -1.28
CSDE1-217ENST00000534699 RAB5CP51148 216 aa7.08□□□□□ -1.28
CSDE1-217ENST00000534699 PRNTQ86SH4 94 aa7.08□□□□□ -1.28
CSDE1-217ENST00000534699 CHCHD7Q9BUK0 85 aa7.08□□□□□ -1.28
CSDE1-217ENST00000534699 MAP1LC3BQ9GZQ8 125 aa7.08□□□□□ -1.28
CSDE1-217ENST00000534699 IGHV3-53P01767 116 aa7.08□□□□□ -1.28
CSDE1-217ENST00000534699 PKIAP61925 76 aa7.08□□□□□ -1.28
CSDE1-217ENST00000534699 ZNF726P1Q15940 193 aa7.08□□□□□ -1.28
CSDE1-217ENST00000534699 LINC01559Q495D7 138 aa7.08□□□□□ -1.28
CSDE1-217ENST00000534699 EIF5AL1Q6IS14 154 aaKnown RBP7.08□□□□□ -1.28
CSDE1-217ENST00000534699 KRTAP1-5Q9BYS1 174 aa7.08□□□□□ -1.28
CSDE1-217ENST00000534699 PARLQ9H300 379 aa7.08□□□□□ -1.28
CSDE1-217ENST00000534699 TRAV8-1A0A0A6YYK1 113 aa7.07□□□□□ -1.28
CSDE1-217ENST00000534699 IBA57-AS1B1ANH7 110 aa7.07□□□□□ -1.28
CSDE1-217ENST00000534699 G3V3Q6 166 aa7.07□□□□□ -1.28
CSDE1-217ENST00000534699 PRB4P10163 310 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-217ENST00000534699 RNASE3P12724 160 aaKnown RBP7.07□□□□□ -1.28
CSDE1-217ENST00000534699 FAM162BQ5T6X4 162 aa7.07□□□□□ -1.28
CSDE1-217ENST00000534699 SMIM12Q96EX1 92 aa7.07□□□□□ -1.28
CSDE1-217ENST00000534699 TM2D2Q9BX73 214 aa7.07□□□□□ -1.28
CSDE1-217ENST00000534699 COX11Q9Y6N1 276 aa7.07□□□□□ -1.28
CSDE1-217ENST00000534699 TRBV10-1A0A0K0K1A3 114 aa7.07□□□□□ -1.28
CSDE1-217ENST00000534699 LINC00694P0DN24 101 aa7.07□□□□□ -1.28
CSDE1-217ENST00000534699 ZNF80P51504 273 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-217ENST00000534699 UBE2G1P62253 170 aa7.07□□□□□ -1.28
CSDE1-217ENST00000534699 ZNF674Q2M3X9 581 aa7.07□□□□□ -1.28
CSDE1-217ENST00000534699 Q5BKY6 102 aa7.07□□□□□ -1.28
CSDE1-217ENST00000534699 Q6ZQT7 251 aa7.07□□□□□ -1.28
CSDE1-217ENST00000534699 GTSF1LQ9H1H1 148 aa7.07□□□□□ -1.28
CSDE1-217ENST00000534699 FRAS1Q86XX4 4008 aa7.07□□□□□ -1.28
CSDE1-217ENST00000534699 KANTRA0A1W2PQU2 76 aa7.06□□□□□ -1.28
CSDE1-217ENST00000534699 KRBOX1C9JBD0 128 aa7.06□□□□□ -1.28
CSDE1-217ENST00000534699 TEX46H3BTG2 121 aa7.06□□□□□ -1.28
CSDE1-217ENST00000534699 HMGB3O15347 200 aaKnown RBP7.06□□□□□ -1.28
CSDE1-217ENST00000534699 LTAP01374 205 aa7.06□□□□□ -1.28
CSDE1-217ENST00000534699 S100A4P26447 101 aaKnown RBP7.06□□□□□ -1.28
CSDE1-217ENST00000534699 TAGLN2P37802 199 aaKnown RBP7.06□□□□□ -1.28
CSDE1-217ENST00000534699 ZNF506Q5JVG8 444 aa7.06□□□□□ -1.28
CSDE1-217ENST00000534699 SPATA12Q7Z6I5 190 aa7.06□□□□□ -1.28
CSDE1-217ENST00000534699 ZNF575Q86XF7 245 aa7.06□□□□□ -1.28
CSDE1-217ENST00000534699 SCRT2Q9NQ03 307 aa7.06□□□□□ -1.28
CSDE1-217ENST00000534699 TRAV1-1A0A0B4J248 108 aa7.06□□□□□ -1.28
CSDE1-217ENST00000534699 BCL2L11O43521 198 aa7.06□□□□□ -1.28
CSDE1-217ENST00000534699 C1QBP02746 253 aa7.06□□□□□ -1.28
CSDE1-217ENST00000534699 TMEM97Q5BJF2 176 aa7.05□□□□□ -1.28
CSDE1-217ENST00000534699 ZFP82Q8N141 532 aa7.05□□□□□ -1.28
CSDE1-217ENST00000534699 OR11H4Q8NGC9 324 aa7.05□□□□□ -1.28
CSDE1-217ENST00000534699 ATP6V0E2Q8NHE4 81 aa7.05□□□□□ -1.28
CSDE1-217ENST00000534699 MANBALQ9NQG1 85 aa7.05□□□□□ -1.28
CSDE1-217ENST00000534699 C11orf21Q9P2W6 132 aa7.05□□□□□ -1.28
CSDE1-217ENST00000534699 HECTD4Q9Y4D8 3996 aa7.05□□□□□ -1.28
CSDE1-217ENST00000534699 IGHV3-38A0A0C4DH36 116 aa7.05□□□□□ -1.28
CSDE1-217ENST00000534699 PGPEP1LA6NFU8 196 aa7.05□□□□□ -1.28
CSDE1-217ENST00000534699 B4DEV8 164 aa7.05□□□□□ -1.28
CSDE1-217ENST00000534699 ARPC5O15511 151 aa7.05□□□□□ -1.28
CSDE1-217ENST00000534699 SFTA3P0C7M3 94 aa7.05□□□□□ -1.28
CSDE1-217ENST00000534699 AKR1C3P42330 323 aa7.05□□□□□ -1.28
CSDE1-217ENST00000534699 ELOBQ15370 118 aa7.05□□□□□ -1.28
CSDE1-217ENST00000534699 UFSP1Q6NVU6 142 aa7.05□□□□□ -1.28
CSDE1-217ENST00000534699 SLC25A29Q8N8R3 303 aa7.05□□□□□ -1.28
CSDE1-217ENST00000534699 RMI2Q96E14 147 aa7.05□□□□□ -1.28
CSDE1-217ENST00000534699 SFRP2Q96HF1 295 aa7.05□□□□□ -1.28
CSDE1-217ENST00000534699 BIN3Q9NQY0 253 aa7.05□□□□□ -1.28
CSDE1-217ENST00000534699 IGKV3D-20A0A0C4DH25 116 aa7.04□□□□□ -1.28
CSDE1-217ENST00000534699 CRYGDP07320 174 aa7.04□□□□□ -1.28
CSDE1-217ENST00000534699 TPT1P13693 172 aaKnown RBP7.04□□□□□ -1.28
CSDE1-217ENST00000534699 LINC00479Q96M42 142 aa7.04□□□□□ -1.28
CSDE1-217ENST00000534699 A0A087WTM6 91 aa7.04□□□□□ -1.28
CSDE1-217ENST00000534699 Q8N1X5 172 aa7.04□□□□□ -1.28
CSDE1-217ENST00000534699 TRAV8-3A0A0A6YYJ7 113 aa7.03□□□□□ -1.28
CSDE1-217ENST00000534699 NDUFS6O75380 124 aaKnown RBP7.03□□□□□ -1.28
CSDE1-217ENST00000534699 RPS20P60866 119 aaKnown RBP7.03□□□□□ -1.28
CSDE1-217ENST00000534699 NHLRC2Q8NBF2 726 aa7.03□□□□□ -1.28
CSDE1-217ENST00000534699 OR10G8Q8NGN5 311 aa7.03□□□□□ -1.28
CSDE1-217ENST00000534699 HERC2O95714 4834 aa7.03□□□□□ -1.28
CSDE1-217ENST00000534699 SH2D1AO60880 128 aa7.03□□□□□ -1.28
CSDE1-217ENST00000534699 IFITM2Q01629 132 aa7.03□□□□□ -1.28
CSDE1-217ENST00000534699 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-217ENST00000534699 C11orf52Q96A22 123 aa7.03□□□□□ -1.28
CSDE1-217ENST00000534699 DNAH11Q96DT5 4516 aa7.02□□□□□ -1.29
CSDE1-217ENST00000534699 RAB4BP61018 213 aa7.02□□□□□ -1.29
CSDE1-217ENST00000534699 WFDC10BQ8IUB3 73 aa7.02□□□□□ -1.29
CSDE1-217ENST00000534699 SLC7A5P1Q8MH63 180 aa7.02□□□□□ -1.29
CSDE1-217ENST00000534699 TMEM70Q9BUB7 260 aa7.02□□□□□ -1.29
CSDE1-217ENST00000534699 SNAI2O43623 268 aa7.02□□□□□ -1.29
CSDE1-217ENST00000534699 ZC2HC1AQ96GY0 325 aa7.02□□□□□ -1.29
CSDE1-217ENST00000534699 MLST8Q9BVC4 326 aa7.02□□□□□ -1.29
CSDE1-217ENST00000534699 H2AFB1P0C5Y9 115 aa7.01□□□□□ -1.29
CSDE1-217ENST00000534699 OR5AL1P0C617 328 aa7.01□□□□□ -1.29
CSDE1-217ENST00000534699 UBE2G2P60604 165 aa7.01□□□□□ -1.29
CSDE1-217ENST00000534699 OR10J3Q5JRS4 329 aa7.01□□□□□ -1.29
CSDE1-217ENST00000534699 CST9LP1Q5W188 147 aa7.01□□□□□ -1.29
CSDE1-217ENST00000534699 SSBP4Q9BWG4 385 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-217ENST00000534699 PHLDA3Q9Y5J5 127 aa7.01□□□□□ -1.29
CSDE1-217ENST00000534699 DYNC1H1Q14204 4646 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms