RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 ABCA13Q86UQ4 5058 aa9.07□□□□□ -0.96
CAPN1-228ENST00000534373 IGHV3-38A0A0C4DH36 116 aa9.07□□□□□ -0.96
CAPN1-228ENST00000534373 LOC100131303A0A0U1RQF7 123 aa9.07□□□□□ -0.96
CAPN1-228ENST00000534373 PGPEP1LA6NFU8 196 aa9.07□□□□□ -0.96
CAPN1-228ENST00000534373 FAM74A7A6NL05 159 aa9.07□□□□□ -0.96
CAPN1-228ENST00000534373 CRYGDP07320 174 aa9.07□□□□□ -0.96
CAPN1-228ENST00000534373 ZNF506Q5JVG8 444 aa9.07□□□□□ -0.96
CAPN1-228ENST00000534373 DPPA3Q6W0C5 159 aa9.07□□□□□ -0.96
CAPN1-228ENST00000534373 ZFP2Q6ZN57 461 aa9.07□□□□□ -0.96
CAPN1-228ENST00000534373 Q6ZNX1 250 aa9.07□□□□□ -0.96
CAPN1-228ENST00000534373 COX8CQ7Z4L0 72 aa9.07□□□□□ -0.96
CAPN1-228ENST00000534373 MAPKAPK5-AS1Q8N8E1 139 aa9.07□□□□□ -0.96
CAPN1-228ENST00000534373 LINC00479Q96M42 142 aa9.07□□□□□ -0.96
CAPN1-228ENST00000534373 TCEAL7Q9BRU2 100 aa9.07□□□□□ -0.96
CAPN1-228ENST00000534373 ZFP30Q9Y2G7 519 aa9.07□□□□□ -0.96
CAPN1-228ENST00000534373 ARL2-SNX15V9GYD0 113 aa9.07□□□□□ -0.96
CAPN1-228ENST00000534373 APOBP04114 4563 aaKnown RBP9.07□□□□□ -0.96
CAPN1-228ENST00000534373 TRAV8-6A0A0B4J262 113 aa9.06□□□□□ -0.96
CAPN1-228ENST00000534373 TRAV34A0A0B4J273 112 aa9.06□□□□□ -0.96
CAPN1-228ENST00000534373 IGKV3D-20A0A0C4DH25 116 aa9.06□□□□□ -0.96
CAPN1-228ENST00000534373 A8MWV9 139 aa9.06□□□□□ -0.96
CAPN1-228ENST00000534373 PEX7O00628 323 aa9.06□□□□□ -0.96
CAPN1-228ENST00000534373 S100A4P26447 101 aaKnown RBP9.06□□□□□ -0.96
CAPN1-228ENST00000534373 LINC01556Q5JQF7 62 aa9.06□□□□□ -0.96
CAPN1-228ENST00000534373 Q8N1X5 172 aa9.06□□□□□ -0.96
CAPN1-228ENST00000534373 OR11H4Q8NGC9 324 aa9.06□□□□□ -0.96
CAPN1-228ENST00000534373 STOML3Q8TAV4 291 aa9.06□□□□□ -0.96
CAPN1-228ENST00000534373 KRTAP4-5Q9BYR2 181 aa9.06□□□□□ -0.96
CAPN1-228ENST00000534373 CYTL1Q9NRR1 136 aa9.06□□□□□ -0.96
CAPN1-228ENST00000534373 A0A087WTM6 91 aa9.05□□□□□ -0.96
CAPN1-228ENST00000534373 ASIPP42127 132 aa9.05□□□□□ -0.96
CAPN1-228ENST00000534373 FHITP49789 147 aa9.05□□□□□ -0.96
CAPN1-228ENST00000534373 UBE2G2P60604 165 aa9.05□□□□□ -0.96
CAPN1-228ENST00000534373 DNLZQ5SXM8 178 aa9.05□□□□□ -0.96
CAPN1-228ENST00000534373 IL36BQ9NZH7 164 aa9.05□□□□□ -0.96
CAPN1-228ENST00000534373 TRBV6-1A0A0K0K1D8 114 aa9.04□□□□□ -0.96
CAPN1-228ENST00000534373 MAP1LC3B2A6NCE7 125 aa9.04□□□□□ -0.96
CAPN1-228ENST00000534373 IBA57-AS1B1ANH7 110 aa9.04□□□□□ -0.96
CAPN1-228ENST00000534373 FGF8P55075 233 aaPredicted RBP9.04□□□□□ -0.96
CAPN1-228ENST00000534373 ZNF345Q14585 488 aa9.04□□□□□ -0.96
CAPN1-228ENST00000534373 LELP1Q5T871 98 aa9.04□□□□□ -0.96
CAPN1-228ENST00000534373 Q86TA4 180 aa9.04□□□□□ -0.96
CAPN1-228ENST00000534373 KCNRGQ8N5I3 272 aa9.04□□□□□ -0.96
CAPN1-228ENST00000534373 ATP6V0E2Q8NHE4 81 aa9.04□□□□□ -0.96
CAPN1-228ENST00000534373 FMC1Q96HJ9 113 aa9.04□□□□□ -0.96
CAPN1-228ENST00000534373 MAP1LC3BQ9GZQ8 125 aa9.04□□□□□ -0.96
CAPN1-228ENST00000534373 GTSF1LQ9H1H1 148 aa9.04□□□□□ -0.96
CAPN1-228ENST00000534373 IGHV3-73A0A0B4J1V6 119 aa9.03□□□□□ -0.96
CAPN1-228ENST00000534373 KANTRA0A1W2PQU2 76 aa9.03□□□□□ -0.96
CAPN1-228ENST00000534373 HMSDA8MTL9 139 aa9.03□□□□□ -0.96
CAPN1-228ENST00000534373 B4DEV8 164 aa9.03□□□□□ -0.96
CAPN1-228ENST00000534373 PFDN1O60925 122 aa9.03□□□□□ -0.96
CAPN1-228ENST00000534373 OR10J3Q5JRS4 329 aa9.03□□□□□ -0.96
CAPN1-228ENST00000534373 ZNF471Q9BX82 626 aaPredicted RBP9.03□□□□□ -0.96
CAPN1-228ENST00000534373 PARLQ9H300 379 aa9.03□□□□□ -0.96
CAPN1-228ENST00000534373 UMAD1C9J7I0 102 aa9.02□□□□□ -0.97
CAPN1-228ENST00000534373 KRBOX1C9JBD0 128 aa9.02□□□□□ -0.97
CAPN1-228ENST00000534373 BCL2L11O43521 198 aa9.02□□□□□ -0.97
CAPN1-228ENST00000534373 SEC11BP0C7V7 166 aa9.02□□□□□ -0.97
CAPN1-228ENST00000534373 CRIP1P50238 77 aa9.02□□□□□ -0.97
CAPN1-228ENST00000534373 UBE2G1P62253 170 aa9.02□□□□□ -0.97
CAPN1-228ENST00000534373 LGALSLQ3ZCW2 172 aaPredicted RBP9.02□□□□□ -0.97
CAPN1-228ENST00000534373 FAM162BQ5T6X4 162 aa9.02□□□□□ -0.97
CAPN1-228ENST00000534373 AKAP14Q86UN6 197 aa9.02□□□□□ -0.97
CAPN1-228ENST00000534373 SYT8Q8NBV8 401 aa9.02□□□□□ -0.97
CAPN1-228ENST00000534373 SCRT2Q9NQ03 307 aa9.02□□□□□ -0.97
CAPN1-228ENST00000534373 A0A0D9SG52 128 aa9.01□□□□□ -0.97
CAPN1-228ENST00000534373 RHODO00212 210 aa9.01□□□□□ -0.97
CAPN1-228ENST00000534373 S100A9P06702 114 aaKnown RBP9.01□□□□□ -0.97
CAPN1-228ENST00000534373 ZNF674Q2M3X9 581 aa9.01□□□□□ -0.97
CAPN1-228ENST00000534373 DMRTA1Q5VZB9 504 aa9.01□□□□□ -0.97
CAPN1-228ENST00000534373 CST9LP1Q5W188 147 aa9.01□□□□□ -0.97
CAPN1-228ENST00000534373 TCTE3Q8IZS6 198 aa9.01□□□□□ -0.97
CAPN1-228ENST00000534373 MBD3L1Q8WWY6 194 aa9.01□□□□□ -0.97
CAPN1-228ENST00000534373 ZC2HC1AQ96GY0 325 aa9.01□□□□□ -0.97
CAPN1-228ENST00000534373 PSCAO43653 123 aa9□□□□□ -0.97
CAPN1-228ENST00000534373 SH2D1AO60880 128 aa9□□□□□ -0.97
CAPN1-228ENST00000534373 LTAP01374 205 aa9□□□□□ -0.97
CAPN1-228ENST00000534373 ARMS2P0C7Q2 107 aa9□□□□□ -0.97
CAPN1-228ENST00000534373 LAGE3Q14657 143 aa9□□□□□ -0.97
CAPN1-228ENST00000534373 UFSP1Q6NVU6 142 aa9□□□□□ -0.97
CAPN1-228ENST00000534373 TMUB2Q71RG4 321 aa9□□□□□ -0.97
CAPN1-228ENST00000534373 A0A087WWC5 75 aa8.99□□□□□ -0.97
CAPN1-228ENST00000534373 LINC00694P0DN24 101 aa8.99□□□□□ -0.97
CAPN1-228ENST00000534373 EIF5AP63241 154 aaKnown RBP8.99□□□□□ -0.97
CAPN1-228ENST00000534373 LINC01559Q495D7 138 aa8.99□□□□□ -0.97
CAPN1-228ENST00000534373 Q6ZSN1 163 aa8.99□□□□□ -0.97
CAPN1-228ENST00000534373 PHLDA3Q9Y5J5 127 aa8.99□□□□□ -0.97
CAPN1-228ENST00000534373 A0A1B0GVG6 124 aa8.98□□□□□ -0.97
CAPN1-228ENST00000534373 LRCOL1A6NCL2 159 aa8.98□□□□□ -0.97
CAPN1-228ENST00000534373 H3BVH4 76 aa8.98□□□□□ -0.97
CAPN1-228ENST00000534373 M0R036 132 aa8.98□□□□□ -0.97
CAPN1-228ENST00000534373 PAGE4O60829 102 aa8.98□□□□□ -0.97
CAPN1-228ENST00000534373 TPT1P13693 172 aaKnown RBP8.98□□□□□ -0.97
CAPN1-228ENST00000534373 AKR1C3P42330 323 aa8.98□□□□□ -0.97
CAPN1-228ENST00000534373 NTN5Q8WTR8 489 aaPredicted RBP8.98□□□□□ -0.97
CAPN1-228ENST00000534373 SFT2D1Q8WV19 159 aa8.98□□□□□ -0.97
CAPN1-228ENST00000534373 SFRP2Q96HF1 295 aa8.98□□□□□ -0.97
CAPN1-228ENST00000534373 TM2D2Q9BX73 214 aa8.98□□□□□ -0.97
CAPN1-228ENST00000534373 SAMD10Q9BYL1 202 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms