RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 PRO0461Q9UI25 63 aa14.79□□□□□ -0.04
CAPN1-226ENST00000533820 PRR9Q5T870 116 aa14.79□□□□□ -0.04
CAPN1-226ENST00000533820 CNFNQ9BYD5 112 aa14.79□□□□□ -0.04
CAPN1-226ENST00000533820 TRBV25-1A0A075B6N4 114 aa14.78□□□□□ -0.04
CAPN1-226ENST00000533820 RPL11P62913 178 aaKnown RBP14.78□□□□□ -0.04
CAPN1-226ENST00000533820 DPM2O94777 84 aa14.78□□□□□ -0.04
CAPN1-226ENST00000533820 MAPKAPK5-AS1Q8N8E1 139 aa14.77□□□□□ -0.04
CAPN1-226ENST00000533820 Q8N8P6 123 aa14.77□□□□□ -0.04
CAPN1-226ENST00000533820 DOPEY2Q9Y3R5 2298 aa14.77□□□□□ -0.04
CAPN1-226ENST00000533820 SORL1Q92673 2214 aa14.77□□□□□ -0.04
CAPN1-226ENST00000533820 GAGE12JA6NER3 117 aa14.77□□□□□ -0.05
CAPN1-226ENST00000533820 GAGE7O76087 117 aa14.77□□□□□ -0.05
CAPN1-226ENST00000533820 GAGE12FP0CL80 117 aa14.77□□□□□ -0.05
CAPN1-226ENST00000533820 GAGE12GP0CL81 117 aa14.77□□□□□ -0.05
CAPN1-226ENST00000533820 GAGE12IP0CL82 117 aa14.77□□□□□ -0.05
CAPN1-226ENST00000533820 GAGE4Q13068 117 aa14.77□□□□□ -0.05
CAPN1-226ENST00000533820 MYOZ3Q8TDC0 251 aa14.77□□□□□ -0.05
CAPN1-226ENST00000533820 SLC50A1Q9BRV3 221 aa14.77□□□□□ -0.05
CAPN1-226ENST00000533820 BPESC1Q9GZL8 116 aa14.77□□□□□ -0.05
CAPN1-226ENST00000533820 IGHV7-4-1A0A0J9YVY3 117 aa14.77□□□□□ -0.05
CAPN1-226ENST00000533820 AJUBAQ96IF1 538 aa14.77□□□□□ -0.05
CAPN1-226ENST00000533820 OOSP1A8MZH6 123 aa14.76□□□□□ -0.05
CAPN1-226ENST00000533820 TRBV12-3P01733 135 aa14.76□□□□□ -0.05
CAPN1-226ENST00000533820 EEF1AKMT3Q96AZ1 226 aa14.76□□□□□ -0.05
CAPN1-226ENST00000533820 LAGE3Q14657 143 aa14.75□□□□□ -0.05
CAPN1-226ENST00000533820 BRD3OSQ6XYD6 125 aa14.75□□□□□ -0.05
CAPN1-226ENST00000533820 IGLV2-18A0A075B6J9 118 aa14.75□□□□□ -0.05
CAPN1-226ENST00000533820 NBL1P41271 181 aa14.75□□□□□ -0.05
CAPN1-226ENST00000533820 NRACQ8N912 160 aa14.75□□□□□ -0.05
CAPN1-226ENST00000533820 C20orf173Q96LM9 149 aa14.75□□□□□ -0.05
CAPN1-226ENST00000533820 IGHV3-11P01762 117 aa14.74□□□□□ -0.05
CAPN1-226ENST00000533820 VPREB3Q9UKI3 123 aa14.74□□□□□ -0.05
CAPN1-226ENST00000533820 F6UB75 175 aa14.74□□□□□ -0.05
CAPN1-226ENST00000533820 UBE2E1P51965 193 aa14.74□□□□□ -0.05
CAPN1-226ENST00000533820 UNQ9165/PRO28630Q6UXU0 137 aa14.73□□□□□ -0.05
CAPN1-226ENST00000533820 ZMAT4Q9H898 229 aa14.73□□□□□ -0.05
CAPN1-226ENST00000533820 CENPVL3A0A0U1RRI6 287 aa14.73□□□□□ -0.05
CAPN1-226ENST00000533820 S100A4P26447 101 aaKnown RBP14.73□□□□□ -0.05
CAPN1-226ENST00000533820 C14orf178Q8N769 122 aaPredicted RBP14.73□□□□□ -0.05
CAPN1-226ENST00000533820 RPL39LQ96EH5 51 aaKnown RBP14.72□□□□□ -0.05
CAPN1-226ENST00000533820 MGPP08493 103 aa14.72□□□□□ -0.05
CAPN1-226ENST00000533820 SRD5A1P18405 259 aa14.72□□□□□ -0.05
CAPN1-226ENST00000533820 SMCPP49901 116 aaPredicted RBP14.72□□□□□ -0.05
CAPN1-226ENST00000533820 ABCA2Q9BZC7 2435 aa14.72□□□□□ -0.05
CAPN1-226ENST00000533820 SRSF2Q01130 221 aaKnown RBP14.72□□□□□ -0.05
CAPN1-226ENST00000533820 LY6EQ16553 131 aa14.72□□□□□ -0.05
CAPN1-226ENST00000533820 CRYBG3Q68DQ2 2970 aa14.71□□□□□ -0.05
CAPN1-226ENST00000533820 A0A087WX48 190 aa14.71□□□□□ -0.05
CAPN1-226ENST00000533820 RBAKDNA6NC62 111 aa14.71□□□□□ -0.05
CAPN1-226ENST00000533820 ATP5LO75964 103 aa14.71□□□□□ -0.05
CAPN1-226ENST00000533820 C12orf74Q32Q52 190 aa14.71□□□□□ -0.05
CAPN1-226ENST00000533820 CEND1Q8N111 149 aa14.71□□□□□ -0.05
CAPN1-226ENST00000533820 CELSR2Q9HCU4 2923 aa14.7□□□□□ -0.06
CAPN1-226ENST00000533820 NPFFO15130 113 aa14.7□□□□□ -0.06
CAPN1-226ENST00000533820 RAX2Q96IS3 184 aa14.7□□□□□ -0.06
CAPN1-226ENST00000533820 SRSF1Q07955 248 aaKnown RBP eCLIP14.69□□□□□ -0.06
CAPN1-226ENST00000533820 KLRB1Q12918 225 aa14.69□□□□□ -0.06
CAPN1-226ENST00000533820 FAM159AQ6UWV7 190 aa14.69□□□□□ -0.06
CAPN1-226ENST00000533820 HIST1H4GQ99525 98 aa14.69□□□□□ -0.06
CAPN1-226ENST00000533820 NDUFV3P56181 108 aaKnown RBP14.69□□□□□ -0.06
CAPN1-226ENST00000533820 C5orf56Q8N8D9 126 aa14.69□□□□□ -0.06
CAPN1-226ENST00000533820 TRAV41A0A0B4J266 112 aa14.68□□□□□ -0.06
CAPN1-226ENST00000533820 RNASE4P34096 147 aaKnown RBP14.68□□□□□ -0.06
CAPN1-226ENST00000533820 TRBV7-1A0A0A6YYK4 115 aa14.68□□□□□ -0.06
CAPN1-226ENST00000533820 LINC01546A6NGU7 62 aa14.68□□□□□ -0.06
CAPN1-226ENST00000533820 LMO4P61968 165 aa14.68□□□□□ -0.06
CAPN1-226ENST00000533820 C9orf47Q6ZRZ4 202 aa14.68□□□□□ -0.06
CAPN1-226ENST00000533820 CARD19Q96LW7 228 aa14.68□□□□□ -0.06
CAPN1-226ENST00000533820 SCGB3A1Q96QR1 104 aa14.68□□□□□ -0.06
CAPN1-226ENST00000533820 GNRH2O43555 120 aa14.67□□□□□ -0.06
CAPN1-226ENST00000533820 LY6DQ14210 128 aa14.67□□□□□ -0.06
CAPN1-226ENST00000533820 TTC32Q5I0X7 151 aa14.67□□□□□ -0.06
CAPN1-226ENST00000533820 PHLDA3Q9Y5J5 127 aa14.67□□□□□ -0.06
CAPN1-226ENST00000533820 TGFAP01135 160 aa14.67□□□□□ -0.06
CAPN1-226ENST00000533820 PSMB2P49721 201 aa14.67□□□□□ -0.06
CAPN1-226ENST00000533820 EMP1P54849 157 aa14.67□□□□□ -0.06
CAPN1-226ENST00000533820 RRN3P1Q2M238 152 aa14.67□□□□□ -0.06
CAPN1-226ENST00000533820 SMIM2Q9BVW6 85 aa14.67□□□□□ -0.06
CAPN1-226ENST00000533820 GAGE2BQ13066 116 aa14.66□□□□□ -0.06
CAPN1-226ENST00000533820 GAGE2EQ4V326 116 aa14.66□□□□□ -0.06
CAPN1-226ENST00000533820 GAGE2DQ9UEU5 116 aa14.66□□□□□ -0.06
CAPN1-226ENST00000533820 USP9YO00507 2555 aaPredicted RBP14.65□□□□□ -0.06
CAPN1-226ENST00000533820 HIGD1BQ9P298 99 aa14.65□□□□□ -0.06
CAPN1-226ENST00000533820 CENPEQ02224 2701 aa14.65□□□□□ -0.06
CAPN1-226ENST00000533820 LOC107984156A0A0G2JMH3 177 aa14.64□□□□□ -0.07
CAPN1-226ENST00000533820 ARL17AQ8IVW1 177 aa14.64□□□□□ -0.07
CAPN1-226ENST00000533820 RASL10AQ92737 203 aa14.64□□□□□ -0.07
CAPN1-226ENST00000533820 MEIG1Q5JSS6 88 aa14.64□□□□□ -0.07
CAPN1-226ENST00000533820 CFAP126Q5VTH2 177 aa14.64□□□□□ -0.07
CAPN1-226ENST00000533820 OR10J6PQ8NGY7 276 aa14.64□□□□□ -0.07
CAPN1-226ENST00000533820 SUMO2P61956 95 aaKnown RBP14.64□□□□□ -0.07
CAPN1-226ENST00000533820 GPHB5Q86YW7 130 aa14.64□□□□□ -0.07
CAPN1-226ENST00000533820 ZFAND2AQ8N6M9 145 aa14.64□□□□□ -0.07
CAPN1-226ENST00000533820 ITPR1Q14643 2758 aa14.63□□□□□ -0.07
CAPN1-226ENST00000533820 PIFOQ8TCI5 191 aa14.63□□□□□ -0.07
CAPN1-226ENST00000533820 TRAV4A0A0B4J268 109 aa14.63□□□□□ -0.07
CAPN1-226ENST00000533820 EDN2P20800 178 aa14.63□□□□□ -0.07
CAPN1-226ENST00000533820 U3KQE9 123 aa14.63□□□□□ -0.07
CAPN1-226ENST00000533820 CRLF1O75462 422 aa14.62□□□□□ -0.07
CAPN1-226ENST00000533820 JPT2Q9H910 190 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms