RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 FXYD7P58549 80 aa6.12□□□□□ -1.43
NEDD8-207ENST00000533242 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.12□□□□□ -1.43
NEDD8-207ENST00000533242 GTSCR1Q86UQ5 136 aa6.12□□□□□ -1.43
NEDD8-207ENST00000533242 LINC00476Q8WZB0 136 aa6.12□□□□□ -1.43
NEDD8-207ENST00000533242 CHCHD1Q96BP2 118 aaKnown RBP6.12□□□□□ -1.43
NEDD8-207ENST00000533242 RETNQ9HD89 108 aa6.12□□□□□ -1.43
NEDD8-207ENST00000533242 TRAV9-2A0A087WT02 112 aa6.11□□□□□ -1.43
NEDD8-207ENST00000533242 TMEM189A5PLL7 270 aa6.11□□□□□ -1.43
NEDD8-207ENST00000533242 D6R8Y8 96 aa6.11□□□□□ -1.43
NEDD8-207ENST00000533242 SMKR1H3BMG3 65 aa6.11□□□□□ -1.43
NEDD8-207ENST00000533242 NCR2O95944 276 aa6.11□□□□□ -1.43
NEDD8-207ENST00000533242 CT45A10P0DMU9 189 aa6.11□□□□□ -1.43
NEDD8-207ENST00000533242 CSN1S1P47710 185 aa6.11□□□□□ -1.43
NEDD8-207ENST00000533242 PSG9Q00887 426 aa6.11□□□□□ -1.43
NEDD8-207ENST00000533242 RIGQ13278 110 aa6.11□□□□□ -1.43
NEDD8-207ENST00000533242 FAM162BQ5T6X4 162 aa6.11□□□□□ -1.43
NEDD8-207ENST00000533242 Q6ZVH6 145 aa6.11□□□□□ -1.43
NEDD8-207ENST00000533242 COX8CQ7Z4L0 72 aa6.11□□□□□ -1.43
NEDD8-207ENST00000533242 TXN2Q99757 166 aa6.11□□□□□ -1.43
NEDD8-207ENST00000533242 UQCR10Q9UDW1 63 aa6.11□□□□□ -1.43
NEDD8-207ENST00000533242 HYDINQ4G0P3 5121 aa6.11□□□□□ -1.43
NEDD8-207ENST00000533242 TRAV8-2A0A0B4J237 113 aa6.11□□□□□ -1.43
NEDD8-207ENST00000533242 RBMY1BA6NDE4 496 aaKnown RBP6.11□□□□□ -1.43
NEDD8-207ENST00000533242 RBMY1EA6NEQ0 496 aaKnown RBP6.11□□□□□ -1.43
NEDD8-207ENST00000533242 OR4C46A6NHA9 309 aa6.11□□□□□ -1.43
NEDD8-207ENST00000533242 TRBV12-3P01733 135 aa6.11□□□□□ -1.43
NEDD8-207ENST00000533242 RBMY1DP0C7P1 496 aaKnown RBP6.11□□□□□ -1.43
NEDD8-207ENST00000533242 ZNF25P17030 456 aaPredicted RBP6.11□□□□□ -1.43
NEDD8-207ENST00000533242 TSPOP30536 169 aa6.11□□□□□ -1.43
NEDD8-207ENST00000533242 IFI27P40305 119 aaPredicted RBP6.11□□□□□ -1.43
NEDD8-207ENST00000533242 KLK9Q2XQG4 91 aa6.11□□□□□ -1.43
NEDD8-207ENST00000533242 C11orf21Q9P2W6 132 aa6.11□□□□□ -1.43
NEDD8-207ENST00000533242 KLK9Q9UKQ9 250 aa6.11□□□□□ -1.43
NEDD8-207ENST00000533242 LOC389332A0A1B0GUA5 103 aa6.1□□□□□ -1.43
NEDD8-207ENST00000533242 SERTM2A0A1B0GWG4 89 aa6.1□□□□□ -1.43
NEDD8-207ENST00000533242 TRGV3P03979 118 aa6.1□□□□□ -1.43
NEDD8-207ENST00000533242 ZNF493Q6ZR52 646 aa6.1□□□□□ -1.43
NEDD8-207ENST00000533242 OR9G4Q8NGQ1 327 aa6.1□□□□□ -1.43
NEDD8-207ENST00000533242 FAM110AQ9BQ89 295 aa6.1□□□□□ -1.43
NEDD8-207ENST00000533242 TMEM208Q9BTX3 173 aa6.1□□□□□ -1.43
NEDD8-207ENST00000533242 SIGLEC8Q9NYZ4 499 aa6.1□□□□□ -1.43
NEDD8-207ENST00000533242 H3BUA1 57 aa6.1□□□□□ -1.43
NEDD8-207ENST00000533242 IGLC6P0CF74 106 aa6.1□□□□□ -1.43
NEDD8-207ENST00000533242 HNRNPA3P51991 378 aaKnown RBP6.1□□□□□ -1.43
NEDD8-207ENST00000533242 MRPL51Q4U2R6 128 aaKnown RBP6.1□□□□□ -1.43
NEDD8-207ENST00000533242 FAM104BQ5XKR9 115 aa6.1□□□□□ -1.43
NEDD8-207ENST00000533242 OR2K2Q8NGT1 345 aa6.1□□□□□ -1.43
NEDD8-207ENST00000533242 LAMTOR2Q9Y2Q5 125 aa6.1□□□□□ -1.43
NEDD8-207ENST00000533242 SELENOKQ9Y6D0 94 aa6.1□□□□□ -1.43
NEDD8-207ENST00000533242 NPSP0C0P6 89 aa6.09□□□□□ -1.43
NEDD8-207ENST00000533242 HINT1P49773 126 aaPredicted RBP6.09□□□□□ -1.43
NEDD8-207ENST00000533242 DEFB1P60022 68 aa6.09□□□□□ -1.43
NEDD8-207ENST00000533242 UNQ9165/PRO28630Q6UXU0 137 aa6.09□□□□□ -1.43
NEDD8-207ENST00000533242 AP5S1Q9NUS5 200 aa6.09□□□□□ -1.43
NEDD8-207ENST00000533242 PLECQ15149 4684 aaKnown RBP6.09□□□□□ -1.43
NEDD8-207ENST00000533242 IGKV3D-20A0A0C4DH25 116 aa6.09□□□□□ -1.43
NEDD8-207ENST00000533242 A0A0G2JLM5 398 aa6.09□□□□□ -1.43
NEDD8-207ENST00000533242 LY6G6CO95867 125 aa6.09□□□□□ -1.43
NEDD8-207ENST00000533242 NPYP01303 97 aa6.09□□□□□ -1.43
NEDD8-207ENST00000533242 SAPCD1Q5SSQ6 148 aa6.09□□□□□ -1.43
NEDD8-207ENST00000533242 Q6AWC8 147 aa6.09□□□□□ -1.43
NEDD8-207ENST00000533242 S100A7AQ86SG5 101 aa6.09□□□□□ -1.43
NEDD8-207ENST00000533242 MRPL52Q86TS9 123 aaKnown RBP6.09□□□□□ -1.43
NEDD8-207ENST00000533242 AGPAT4-IT1Q9H0P7 198 aa6.09□□□□□ -1.43
NEDD8-207ENST00000533242 A0A087X0K7 114 aa6.08□□□□□ -1.44
NEDD8-207ENST00000533242 ORM1P02763 201 aa6.08□□□□□ -1.44
NEDD8-207ENST00000533242 TWIST1Q15672 202 aa6.08□□□□□ -1.44
NEDD8-207ENST00000533242 FER1L6-AS1Q8NA97 138 aa6.08□□□□□ -1.44
NEDD8-207ENST00000533242 RNF185Q96GF1 192 aa6.08□□□□□ -1.44
NEDD8-207ENST00000533242 PRELID3AQ96N28 172 aa6.08□□□□□ -1.44
NEDD8-207ENST00000533242 BRI3O95415 125 aa6.08□□□□□ -1.44
NEDD8-207ENST00000533242 GATA1P15976 413 aaPredicted RBP6.08□□□□□ -1.44
NEDD8-207ENST00000533242 SYNJ2BPP57105 145 aa6.08□□□□□ -1.44
NEDD8-207ENST00000533242 PRR9Q5T870 116 aa6.08□□□□□ -1.44
NEDD8-207ENST00000533242 GPHB5Q86YW7 130 aa6.08□□□□□ -1.44
NEDD8-207ENST00000533242 PRSS3P2Q8NHM4 247 aa6.08□□□□□ -1.44
NEDD8-207ENST00000533242 TMEM190Q8WZ59 177 aa6.08□□□□□ -1.44
NEDD8-207ENST00000533242 EEF1AKMT3Q96AZ1 226 aa6.08□□□□□ -1.44
NEDD8-207ENST00000533242 C20orf173Q96LM9 149 aa6.08□□□□□ -1.44
NEDD8-207ENST00000533242 U3KQE9 123 aa6.08□□□□□ -1.44
NEDD8-207ENST00000533242 A0A1B0GW15 77 aa6.07□□□□□ -1.44
NEDD8-207ENST00000533242 OR5AL1P0C617 328 aa6.07□□□□□ -1.44
NEDD8-207ENST00000533242 LINC01545Q5VT33 79 aa6.07□□□□□ -1.44
NEDD8-207ENST00000533242 ARL6IP6Q8N6S5 226 aa6.07□□□□□ -1.44
NEDD8-207ENST00000533242 PEF1Q9UBV8 284 aaKnown RBP6.07□□□□□ -1.44
NEDD8-207ENST00000533242 TRBV7-1A0A0A6YYK4 115 aa6.07□□□□□ -1.44
NEDD8-207ENST00000533242 DLEU1O43261 78 aa6.07□□□□□ -1.44
NEDD8-207ENST00000533242 SPRY2O43597 315 aa6.07□□□□□ -1.44
NEDD8-207ENST00000533242 EDN2P20800 178 aa6.07□□□□□ -1.44
NEDD8-207ENST00000533242 TCTAP57738 103 aa6.07□□□□□ -1.44
NEDD8-207ENST00000533242 COL5A1-AS1Q5SY13 56 aa6.07□□□□□ -1.44
NEDD8-207ENST00000533242 FA2HQ7L5A8 372 aa6.07□□□□□ -1.44
NEDD8-207ENST00000533242 WFDC3Q8IUB2 231 aa6.07□□□□□ -1.44
NEDD8-207ENST00000533242 ORMDL3Q8N138 153 aa6.07□□□□□ -1.44
NEDD8-207ENST00000533242 MAP1LC3CQ9BXW4 147 aa6.07□□□□□ -1.44
NEDD8-207ENST00000533242 PEMTQ9UBM1 199 aa6.07□□□□□ -1.44
NEDD8-207ENST00000533242 MRPS16Q9Y3D3 137 aaKnown RBP6.07□□□□□ -1.44
NEDD8-207ENST00000533242 NUPR2A6NF83 97 aa6.06□□□□□ -1.44
NEDD8-207ENST00000533242 FABP5P3A8MUU1 101 aa6.06□□□□□ -1.44
NEDD8-207ENST00000533242 SCGB2A1O75556 95 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms