RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 IGLV2-8P01709 118 aa8.52□□□□□ -1.05
CAPN1-223ENST00000533079 PFN1P07737 140 aaKnown RBP8.52□□□□□ -1.05
CAPN1-223ENST00000533079 HOXA5P20719 270 aa8.52□□□□□ -1.05
CAPN1-223ENST00000533079 CDKN1BP46527 198 aa8.52□□□□□ -1.05
CAPN1-223ENST00000533079 KRTAP10-1P60331 282 aa8.52□□□□□ -1.05
CAPN1-223ENST00000533079 ELOBQ15370 118 aa8.52□□□□□ -1.05
CAPN1-223ENST00000533079 ZNF738Q8NE65 137 aa8.52□□□□□ -1.05
CAPN1-223ENST00000533079 SFRP2Q96HF1 295 aa8.52□□□□□ -1.05
CAPN1-223ENST00000533079 FMC1Q96HJ9 113 aa8.52□□□□□ -1.05
CAPN1-223ENST00000533079 BIN3Q9NQY0 253 aa8.52□□□□□ -1.05
CAPN1-223ENST00000533079 OSTCQ9NRP0 149 aa8.52□□□□□ -1.05
CAPN1-223ENST00000533079 PPP1R14DQ9NXH3 145 aa8.52□□□□□ -1.05
CAPN1-223ENST00000533079 TRAV9-1A0A075B6T8 112 aa8.51□□□□□ -1.05
CAPN1-223ENST00000533079 TRAV8-2A0A0B4J237 113 aa8.51□□□□□ -1.05
CAPN1-223ENST00000533079 HTN1P15515 57 aa8.51□□□□□ -1.05
CAPN1-223ENST00000533079 HIST1H1AQ02539 215 aaPredicted RBP8.51□□□□□ -1.05
CAPN1-223ENST00000533079 CENPWQ5EE01 88 aa8.51□□□□□ -1.05
CAPN1-223ENST00000533079 FAM231DQ6ZW35 169 aa8.51□□□□□ -1.05
CAPN1-223ENST00000533079 BAGE2Q86Y30 109 aa8.51□□□□□ -1.05
CAPN1-223ENST00000533079 RNF182Q8N6D2 247 aa8.51□□□□□ -1.05
CAPN1-223ENST00000533079 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.51□□□□□ -1.05
CAPN1-223ENST00000533079 OR8A1Q8NGG7 326 aa8.51□□□□□ -1.05
CAPN1-223ENST00000533079 CMTM2Q8TAZ6 248 aa8.51□□□□□ -1.05
CAPN1-223ENST00000533079 TMEM70Q9BUB7 260 aa8.51□□□□□ -1.05
CAPN1-223ENST00000533079 MLST8Q9BVC4 326 aa8.51□□□□□ -1.05
CAPN1-223ENST00000533079 AAMDCQ9H7C9 122 aa8.51□□□□□ -1.05
CAPN1-223ENST00000533079 A0A087WTM6 91 aa8.5□□□□□ -1.05
CAPN1-223ENST00000533079 SNURFLB1AK76 121 aa8.5□□□□□ -1.05
CAPN1-223ENST00000533079 K7EN84 100 aa8.5□□□□□ -1.05
CAPN1-223ENST00000533079 K7EP13 123 aa8.5□□□□□ -1.05
CAPN1-223ENST00000533079 K7EQM0 130 aa8.5□□□□□ -1.05
CAPN1-223ENST00000533079 LTAP01374 205 aa8.5□□□□□ -1.05
CAPN1-223ENST00000533079 SMR3BP02814 79 aaPredicted RBP8.5□□□□□ -1.05
CAPN1-223ENST00000533079 RAB5AP20339 215 aa8.5□□□□□ -1.05
CAPN1-223ENST00000533079 GCSHP23434 173 aa8.5□□□□□ -1.05
CAPN1-223ENST00000533079 S100PP25815 95 aa8.5□□□□□ -1.05
CAPN1-223ENST00000533079 CSN1S1P47710 185 aa8.5□□□□□ -1.05
CAPN1-223ENST00000533079 SERTAD4-AS1Q5TG53 156 aa8.5□□□□□ -1.05
CAPN1-223ENST00000533079 TMEM75Q8N9X5 138 aa8.5□□□□□ -1.05
CAPN1-223ENST00000533079 OR10G8Q8NGN5 311 aa8.5□□□□□ -1.05
CAPN1-223ENST00000533079 MRPL53Q96EL3 112 aaKnown RBP8.5□□□□□ -1.05
CAPN1-223ENST00000533079 SLC50A1Q9BRV3 221 aa8.5□□□□□ -1.05
CAPN1-223ENST00000533079 MDFICQ9P1T7 246 aa8.5□□□□□ -1.05
CAPN1-223ENST00000533079 ZFP30Q9Y2G7 519 aa8.5□□□□□ -1.05
CAPN1-223ENST00000533079 A0A096LPF7 62 aa8.49□□□□□ -1.05
CAPN1-223ENST00000533079 KRTAP29-1A8MX34 341 aaPredicted RBP8.49□□□□□ -1.05
CAPN1-223ENST00000533079 DIRC3C9JPN6 131 aa8.49□□□□□ -1.05
CAPN1-223ENST00000533079 IGLV2-11P01706 119 aa8.49□□□□□ -1.05
CAPN1-223ENST00000533079 FUSP35637 526 aaKnown RBP eCLIP8.49□□□□□ -1.05
CAPN1-223ENST00000533079 UBE2G1P62253 170 aa8.49□□□□□ -1.05
CAPN1-223ENST00000533079 KCNIP4Q6PIL6 250 aa8.49□□□□□ -1.05
CAPN1-223ENST00000533079 COX8CQ7Z4L0 72 aa8.49□□□□□ -1.05
CAPN1-223ENST00000533079 EXOC3-AS1Q8N2X6 119 aa8.49□□□□□ -1.05
CAPN1-223ENST00000533079 LINC00479Q96M42 142 aa8.49□□□□□ -1.05
CAPN1-223ENST00000533079 ZNF331Q9NQX6 463 aaPredicted RBP8.49□□□□□ -1.05
CAPN1-223ENST00000533079 TRAV9-2A0A087WT02 112 aa8.48□□□□□ -1.05
CAPN1-223ENST00000533079 GAGE12BA1L429 117 aa8.48□□□□□ -1.05
CAPN1-223ENST00000533079 GAGE7O76087 117 aa8.48□□□□□ -1.05
CAPN1-223ENST00000533079 GAGE12FP0CL80 117 aa8.48□□□□□ -1.05
CAPN1-223ENST00000533079 GAGE12GP0CL81 117 aa8.48□□□□□ -1.05
CAPN1-223ENST00000533079 GAGE12IP0CL82 117 aa8.48□□□□□ -1.05
CAPN1-223ENST00000533079 DNAH10OSP0CZ25 163 aa8.48□□□□□ -1.05
CAPN1-223ENST00000533079 DAZ2Q13117 558 aaKnown RBP8.48□□□□□ -1.05
CAPN1-223ENST00000533079 TMEM183AQ8IXX5 376 aa8.48□□□□□ -1.05
CAPN1-223ENST00000533079 SYT8Q8NBV8 401 aa8.48□□□□□ -1.05
CAPN1-223ENST00000533079 ZNF492Q9P255 531 aa8.48□□□□□ -1.05
CAPN1-223ENST00000533079 UBR4Q5T4S7 5183 aa8.48□□□□□ -1.05
CAPN1-223ENST00000533079 RBAKDNA6NC62 111 aa8.47□□□□□ -1.05
CAPN1-223ENST00000533079 PGPEP1LA6NFU8 196 aa8.47□□□□□ -1.05
CAPN1-223ENST00000533079 H3BTX0 84 aa8.47□□□□□ -1.05
CAPN1-223ENST00000533079 SLC17A3O00476 420 aa8.47□□□□□ -1.05
CAPN1-223ENST00000533079 NXPH4O95158 308 aa8.47□□□□□ -1.05
CAPN1-223ENST00000533079 TYMSP04818 313 aa8.47□□□□□ -1.05
CAPN1-223ENST00000533079 SNRPCP09234 159 aaKnown RBP8.47□□□□□ -1.05
CAPN1-223ENST00000533079 GNG5P63218 68 aa8.47□□□□□ -1.05
CAPN1-223ENST00000533079 PSG3Q16557 428 aa8.47□□□□□ -1.05
CAPN1-223ENST00000533079 IGFL4Q6B9Z1 124 aa8.47□□□□□ -1.05
CAPN1-223ENST00000533079 VSIG2Q96IQ7 327 aa8.47□□□□□ -1.05
CAPN1-223ENST00000533079 IL36BQ9NZH7 164 aa8.47□□□□□ -1.05
CAPN1-223ENST00000533079 V9GYV3 84 aa8.47□□□□□ -1.05
CAPN1-223ENST00000533079 HMCN2Q8NDA2 5059 aa8.46□□□□□ -1.05
CAPN1-223ENST00000533079 FLG2Q5D862 2391 aaPredicted RBP8.46□□□□□ -1.06
CAPN1-223ENST00000533079 TRAV34A0A0B4J273 112 aa8.46□□□□□ -1.06
CAPN1-223ENST00000533079 FLI1Q01543 452 aaPredicted RBP8.46□□□□□ -1.06
CAPN1-223ENST00000533079 NTN5Q8WTR8 489 aaPredicted RBP8.46□□□□□ -1.06
CAPN1-223ENST00000533079 TMA7Q9Y2S6 64 aaKnown RBP8.46□□□□□ -1.06
CAPN1-223ENST00000533079 ICOSQ9Y6W8 199 aa8.46□□□□□ -1.06
CAPN1-223ENST00000533079 C1orf196B1AJZ1 125 aa8.45□□□□□ -1.06
CAPN1-223ENST00000533079 PLA2G1BP04054 148 aaKnown RBP8.45□□□□□ -1.06
CAPN1-223ENST00000533079 CXCL1P09341 107 aa8.45□□□□□ -1.06
CAPN1-223ENST00000533079 CT83Q5H943 113 aa8.45□□□□□ -1.06
CAPN1-223ENST00000533079 SAPCD1Q5SSQ6 148 aa8.45□□□□□ -1.06
CAPN1-223ENST00000533079 IBA57Q5T440 356 aaKnown RBP8.45□□□□□ -1.06
CAPN1-223ENST00000533079 GOLT1AQ6ZVE7 132 aa8.45□□□□□ -1.06
CAPN1-223ENST00000533079 LINC00467Q9BRT7 94 aa8.45□□□□□ -1.06
CAPN1-223ENST00000533079 PSG8Q9UQ74 426 aa8.45□□□□□ -1.06
CAPN1-223ENST00000533079 URGCP-MRPS24S4R325 110 aa8.45□□□□□ -1.06
CAPN1-223ENST00000533079 TRGV2A0A075B6R0 118 aa8.44□□□□□ -1.06
CAPN1-223ENST00000533079 TGIF2-C20orf24A0A0A6YYL0 155 aa8.44□□□□□ -1.06
CAPN1-223ENST00000533079 SMIM27A0A1W2PRY6 76 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms