RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 Q6ZN92 141 aa4.29□□□□□ -1.72
ATPAF1-210ENST00000532925 IFI27L1Q96BM0 104 aa4.29□□□□□ -1.72
ATPAF1-210ENST00000532925 RAX2Q96IS3 184 aa4.29□□□□□ -1.72
ATPAF1-210ENST00000532925 AP1S3Q96PC3 154 aa4.29□□□□□ -1.72
ATPAF1-210ENST00000532925 C20orf78Q9BR46 151 aa4.29□□□□□ -1.72
ATPAF1-210ENST00000532925 DPH3P1Q9H4G8 78 aa4.29□□□□□ -1.72
ATPAF1-210ENST00000532925 HLA-DRB4X5D2U9 266 aa4.29□□□□□ -1.72
ATPAF1-210ENST00000532925 MYO18BQ8IUG5 2567 aa4.29□□□□□ -1.72
ATPAF1-210ENST00000532925 UBR5O95071 2799 aaPredicted RBP4.28□□□□□ -1.72
ATPAF1-210ENST00000532925 ZNF462Q96JM2 2506 aa4.28□□□□□ -1.72
ATPAF1-210ENST00000532925 IGHV3-49A0A0A0MS15 119 aa4.28□□□□□ -1.72
ATPAF1-210ENST00000532925 A0A1B0GV90 55 aa4.28□□□□□ -1.72
ATPAF1-210ENST00000532925 DLEU1O43261 78 aa4.28□□□□□ -1.72
ATPAF1-210ENST00000532925 GAGE1Q13065 139 aa4.28□□□□□ -1.72
ATPAF1-210ENST00000532925 PIK3CD-AS1Q5SR53 167 aa4.28□□□□□ -1.72
ATPAF1-210ENST00000532925 PRR9Q5T870 116 aa4.28□□□□□ -1.72
ATPAF1-210ENST00000532925 SLC25A34Q6PIV7 304 aa4.28□□□□□ -1.72
ATPAF1-210ENST00000532925 FOXI2Q6ZQN5 318 aa4.28□□□□□ -1.72
ATPAF1-210ENST00000532925 LINC00173Q6ZV60 143 aa4.28□□□□□ -1.72
ATPAF1-210ENST00000532925 NRACQ8N912 160 aa4.28□□□□□ -1.72
ATPAF1-210ENST00000532925 OR2K2Q8NGT1 345 aa4.28□□□□□ -1.72
ATPAF1-210ENST00000532925 C4orf3Q8WVX3 66 aa4.28□□□□□ -1.72
ATPAF1-210ENST00000532925 EPG5Q9HCE0 2579 aa4.28□□□□□ -1.72
ATPAF1-210ENST00000532925 PTPN13Q12923 2485 aa4.28□□□□□ -1.72
ATPAF1-210ENST00000532925 USP9YO00507 2555 aaPredicted RBP4.27□□□□□ -1.73
ATPAF1-210ENST00000532925 CSMD1Q96PZ7 3565 aa4.27□□□□□ -1.73
ATPAF1-210ENST00000532925 IGHV4OR15-8A0A075B7B6 117 aa4.27□□□□□ -1.73
ATPAF1-210ENST00000532925 A0A087WW49 117 aa4.27□□□□□ -1.73
ATPAF1-210ENST00000532925 A0A0J9YX75 114 aa4.27□□□□□ -1.73
ATPAF1-210ENST00000532925 A1L4Q6 167 aa4.27□□□□□ -1.73
ATPAF1-210ENST00000532925 C7orf71A4D174 169 aa4.27□□□□□ -1.73
ATPAF1-210ENST00000532925 H3BVH4 76 aa4.27□□□□□ -1.73
ATPAF1-210ENST00000532925 ZNF561-AS1K7EIQ3 104 aa4.27□□□□□ -1.73
ATPAF1-210ENST00000532925 SIVA1O15304 175 aa4.27□□□□□ -1.73
ATPAF1-210ENST00000532925 COX8AP10176 69 aa4.27□□□□□ -1.73
ATPAF1-210ENST00000532925 S100A4P26447 101 aaKnown RBP4.27□□□□□ -1.73
ATPAF1-210ENST00000532925 SCGB2A2Q13296 93 aa4.27□□□□□ -1.73
ATPAF1-210ENST00000532925 FHL2Q14192 279 aa4.27□□□□□ -1.73
ATPAF1-210ENST00000532925 ANXA2RQ3ZCQ2 193 aa4.27□□□□□ -1.73
ATPAF1-210ENST00000532925 ORMDL2Q53FV1 153 aa4.27□□□□□ -1.73
ATPAF1-210ENST00000532925 C12orf54Q6X4T0 127 aa4.27□□□□□ -1.73
ATPAF1-210ENST00000532925 Q96MF0 132 aa4.27□□□□□ -1.73
ATPAF1-210ENST00000532925 SMIM2Q9BVW6 85 aa4.27□□□□□ -1.73
ATPAF1-210ENST00000532925 ZMAT4Q9H898 229 aa4.27□□□□□ -1.73
ATPAF1-210ENST00000532925 EDA2RQ9HAV5 297 aa4.27□□□□□ -1.73
ATPAF1-210ENST00000532925 MSRB1Q9NZV6 116 aa4.27□□□□□ -1.73
ATPAF1-210ENST00000532925 PEMTQ9UBM1 199 aa4.27□□□□□ -1.73
ATPAF1-210ENST00000532925 GOLT1BQ9Y3E0 138 aa4.27□□□□□ -1.73
ATPAF1-210ENST00000532925 PHLDA3Q9Y5J5 127 aa4.27□□□□□ -1.73
ATPAF1-210ENST00000532925 FLNBO75369 2602 aaKnown RBP4.27□□□□□ -1.73
ATPAF1-210ENST00000532925 FLNCQ14315 2725 aa4.27□□□□□ -1.73
ATPAF1-210ENST00000532925 LRRK2Q5S007 2527 aa4.27□□□□□ -1.73
ATPAF1-210ENST00000532925 ASH1LQ9NR48 2969 aaKnown RBP4.26□□□□□ -1.73
ATPAF1-210ENST00000532925 NAV2Q8IVL1 2488 aa4.26□□□□□ -1.73
ATPAF1-210ENST00000532925 TRAV12-1A0A0B4J245 112 aa4.26□□□□□ -1.73
ATPAF1-210ENST00000532925 LOC389332A0A1B0GUA5 103 aa4.26□□□□□ -1.73
ATPAF1-210ENST00000532925 TCAPO15273 167 aa4.26□□□□□ -1.73
ATPAF1-210ENST00000532925 HOXA3O43365 443 aaPredicted RBP4.26□□□□□ -1.73
ATPAF1-210ENST00000532925 NCR2O95944 276 aa4.26□□□□□ -1.73
ATPAF1-210ENST00000532925 RNASE3P12724 160 aaKnown RBP4.26□□□□□ -1.73
ATPAF1-210ENST00000532925 EVI2AP22794 236 aa4.26□□□□□ -1.73
ATPAF1-210ENST00000532925 HOXD3P31249 432 aaPredicted RBP4.26□□□□□ -1.73
ATPAF1-210ENST00000532925 CDKN1BP46527 198 aa4.26□□□□□ -1.73
ATPAF1-210ENST00000532925 SUMO2P61956 95 aaKnown RBP4.26□□□□□ -1.73
ATPAF1-210ENST00000532925 LAGE3Q14657 143 aa4.26□□□□□ -1.73
ATPAF1-210ENST00000532925 FAM159AQ6UWV7 190 aa4.26□□□□□ -1.73
ATPAF1-210ENST00000532925 ATOH7Q8N100 152 aa4.26□□□□□ -1.73
ATPAF1-210ENST00000532925 OR9G4Q8NGQ1 327 aa4.26□□□□□ -1.73
ATPAF1-210ENST00000532925 PTH2Q96A98 100 aa4.26□□□□□ -1.73
ATPAF1-210ENST00000532925 C9orf85Q96MD7 179 aa4.26□□□□□ -1.73
ATPAF1-210ENST00000532925 SVEP1Q4LDE5 3571 aa4.26□□□□□ -1.73
ATPAF1-210ENST00000532925 FBN2P35556 2912 aa4.25□□□□□ -1.73
ATPAF1-210ENST00000532925 TRGV11A0A075B6L2 103 aa4.25□□□□□ -1.73
ATPAF1-210ENST00000532925 TRAV25A0A0B4J276 109 aa4.25□□□□□ -1.73
ATPAF1-210ENST00000532925 TRBV6-5A0A0K0K1A5 114 aa4.25□□□□□ -1.73
ATPAF1-210ENST00000532925 LINC01619G3V211 115 aa4.25□□□□□ -1.73
ATPAF1-210ENST00000532925 SMKR1H3BMG3 65 aa4.25□□□□□ -1.73
ATPAF1-210ENST00000532925 J3KRW8 73 aa4.25□□□□□ -1.73
ATPAF1-210ENST00000532925 RNASE4P34096 147 aaKnown RBP4.25□□□□□ -1.73
ATPAF1-210ENST00000532925 BOD1L2Q8IYS8 172 aa4.25□□□□□ -1.73
ATPAF1-210ENST00000532925 LINC00467Q9BRT7 94 aa4.25□□□□□ -1.73
ATPAF1-210ENST00000532925 TMEM160Q9NX00 188 aa4.25□□□□□ -1.73
ATPAF1-210ENST00000532925 ZFYVE26Q68DK2 2539 aa4.25□□□□□ -1.73
ATPAF1-210ENST00000532925 IGHV1OR15-1A0A075B7D0 117 aa4.24□□□□□ -1.73
ATPAF1-210ENST00000532925 MUC21A0A0G2JKD1 596 aa4.24□□□□□ -1.73
ATPAF1-210ENST00000532925 MUC21A0A140T8X8 626 aa4.24□□□□□ -1.73
ATPAF1-210ENST00000532925 hDV102S1A0JD36 115 aa4.24□□□□□ -1.73
ATPAF1-210ENST00000532925 F6UB75 175 aa4.24□□□□□ -1.73
ATPAF1-210ENST00000532925 CD5LO43866 347 aa4.24□□□□□ -1.73
ATPAF1-210ENST00000532925 DPM2O94777 84 aa4.24□□□□□ -1.73
ATPAF1-210ENST00000532925 SMIM17P0DL12 118 aa4.24□□□□□ -1.73
ATPAF1-210ENST00000532925 FGF6P10767 208 aa4.24□□□□□ -1.73
ATPAF1-210ENST00000532925 PLNP26678 52 aa4.24□□□□□ -1.73
ATPAF1-210ENST00000532925 SYNJ2BPP57105 145 aa4.24□□□□□ -1.73
ATPAF1-210ENST00000532925 SEC11AP67812 179 aa4.24□□□□□ -1.73
ATPAF1-210ENST00000532925 MAJINQ3KP22 176 aa4.24□□□□□ -1.73
ATPAF1-210ENST00000532925 MUC21Q5SSG8 566 aa4.24□□□□□ -1.73
ATPAF1-210ENST00000532925 HIST2H2BCQ6DN03 193 aa4.24□□□□□ -1.73
ATPAF1-210ENST00000532925 CFAP161Q6P656 301 aa4.24□□□□□ -1.73
ATPAF1-210ENST00000532925 AMTNQ6UX39 209 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms