RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 C18orf15Q96N68 181 aa13.04□□□□□ -0.32
GMDS-208ENST00000530927 PARLQ9H300 379 aa13.04□□□□□ -0.32
GMDS-208ENST00000530927 PFN1P07737 140 aaKnown RBP13.03□□□□□ -0.32
GMDS-208ENST00000530927 LGALS9BQ3B8N2 356 aa13.03□□□□□ -0.32
GMDS-208ENST00000530927 ATRAIDQ6UW56 229 aa13.03□□□□□ -0.32
GMDS-208ENST00000530927 BAGE2Q86Y30 109 aa13.03□□□□□ -0.32
GMDS-208ENST00000530927 CLRN3Q8NCR9 226 aa13.03□□□□□ -0.32
GMDS-208ENST00000530927 SDF2L1Q9HCN8 221 aa13.03□□□□□ -0.32
GMDS-208ENST00000530927 GNG4P50150 75 aa13.02□□□□□ -0.33
GMDS-208ENST00000530927 CRIP1P50238 77 aa13.02□□□□□ -0.33
GMDS-208ENST00000530927 ZNF674Q2M3X9 581 aa13.02□□□□□ -0.33
GMDS-208ENST00000530927 ZC2HC1AQ96GY0 325 aa13.02□□□□□ -0.33
GMDS-208ENST00000530927 ZNF479Q96JC4 524 aa13.02□□□□□ -0.33
GMDS-208ENST00000530927 C9JCJ5 164 aa13.01□□□□□ -0.33
GMDS-208ENST00000530927 FAM74A3Q4VXF1 159 aa13.01□□□□□ -0.33
GMDS-208ENST00000530927 CENPWQ5EE01 88 aa13.01□□□□□ -0.33
GMDS-208ENST00000530927 COX8CQ7Z4L0 72 aa13.01□□□□□ -0.33
GMDS-208ENST00000530927 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.01□□□□□ -0.33
GMDS-208ENST00000530927 SMIM12Q96EX1 92 aa13.01□□□□□ -0.33
GMDS-208ENST00000530927 LINC00588Q9Y4M8 146 aa13.01□□□□□ -0.33
GMDS-208ENST00000530927 FAT2Q9NYQ8 4349 aa13.01□□□□□ -0.33
GMDS-208ENST00000530927 MUC4Q99102 2169 aa13.01□□□□□ -0.33
GMDS-208ENST00000530927 FHL2Q14192 279 aa13□□□□□ -0.33
GMDS-208ENST00000530927 NHLRC2Q8NBF2 726 aa13□□□□□ -0.33
GMDS-208ENST00000530927 SMIM7Q9BQ49 75 aa13□□□□□ -0.33
GMDS-208ENST00000530927 SPXQ9BT56 116 aa13□□□□□ -0.33
GMDS-208ENST00000530927 IGKV3D-20A0A0C4DH25 116 aa12.99□□□□□ -0.33
GMDS-208ENST00000530927 ZNF727A8MUV8 499 aa12.99□□□□□ -0.33
GMDS-208ENST00000530927 RNF212Q495C1 297 aa12.99□□□□□ -0.33
GMDS-208ENST00000530927 SOHLH1Q5JUK2 328 aa12.99□□□□□ -0.33
GMDS-208ENST00000530927 RASL10AQ92737 203 aa12.99□□□□□ -0.33
GMDS-208ENST00000530927 KCNS1Q96KK3 526 aa12.99□□□□□ -0.33
GMDS-208ENST00000530927 MLST8Q9BVC4 326 aa12.99□□□□□ -0.33
GMDS-208ENST00000530927 TRBV20OR9-2A0A075B6H5 130 aa12.98□□□□□ -0.33
GMDS-208ENST00000530927 A0A096LPF7 62 aa12.98□□□□□ -0.33
GMDS-208ENST00000530927 M0R2P5 195 aa12.98□□□□□ -0.33
GMDS-208ENST00000530927 RNASE3P12724 160 aaKnown RBP12.97□□□□□ -0.33
GMDS-208ENST00000530927 ESRGQ1W209 222 aa12.97□□□□□ -0.33
GMDS-208ENST00000530927 M0R036 132 aa12.96□□□□□ -0.33
GMDS-208ENST00000530927 PAX4O43316 350 aa12.96□□□□□ -0.33
GMDS-208ENST00000530927 SH2D1AO60880 128 aa12.96□□□□□ -0.33
GMDS-208ENST00000530927 IGLV2-8P01709 118 aa12.96□□□□□ -0.33
GMDS-208ENST00000530927 CRYBA4P53673 196 aa12.96□□□□□ -0.33
GMDS-208ENST00000530927 ZNRF2Q8NHG8 242 aa12.96□□□□□ -0.33
GMDS-208ENST00000530927 C9orf85Q96MD7 179 aa12.96□□□□□ -0.33
GMDS-208ENST00000530927 LY96Q9Y6Y9 160 aa12.96□□□□□ -0.33
GMDS-208ENST00000530927 DNAH17Q9UFH2 4485 aa12.96□□□□□ -0.34
GMDS-208ENST00000530927 TRGV4A0A0C4DH28 118 aa12.96□□□□□ -0.34
GMDS-208ENST00000530927 FABP5P3A8MUU1 101 aa12.96□□□□□ -0.34
GMDS-208ENST00000530927 ZNF575Q86XF7 245 aa12.96□□□□□ -0.34
GMDS-208ENST00000530927 OCC1Q8TAD7 63 aa12.96□□□□□ -0.34
GMDS-208ENST00000530927 BIN3Q9NQY0 253 aa12.96□□□□□ -0.34
GMDS-208ENST00000530927 SMCO4Q9NRQ5 59 aa12.96□□□□□ -0.34
GMDS-208ENST00000530927 HHLA3Q9XRX5 114 aa12.96□□□□□ -0.34
GMDS-208ENST00000530927 PGPEP1LA6NFU8 196 aa12.95□□□□□ -0.34
GMDS-208ENST00000530927 H3BNG1 76 aa12.95□□□□□ -0.34
GMDS-208ENST00000530927 ORM1P02763 201 aa12.95□□□□□ -0.34
GMDS-208ENST00000530927 MGST1P10620 155 aaKnown RBP12.95□□□□□ -0.34
GMDS-208ENST00000530927 CCL18P55774 89 aa12.95□□□□□ -0.34
GMDS-208ENST00000530927 RHEBQ15382 184 aa12.95□□□□□ -0.34
GMDS-208ENST00000530927 TMEM241Q24JQ0 296 aa12.95□□□□□ -0.34
GMDS-208ENST00000530927 FAM162BQ5T6X4 162 aa12.95□□□□□ -0.34
GMDS-208ENST00000530927 Q6ZR54 194 aa12.95□□□□□ -0.34
GMDS-208ENST00000530927 PRO0255Q9UI72 69 aa12.95□□□□□ -0.34
GMDS-208ENST00000530927 HECTD4Q9Y4D8 3996 aa12.94□□□□□ -0.34
GMDS-208ENST00000530927 TMSB15BA0A087X1C1 80 aa12.94□□□□□ -0.34
GMDS-208ENST00000530927 TRAV4A0A0B4J268 109 aa12.94□□□□□ -0.34
GMDS-208ENST00000530927 GRIFINA4D1Z8 144 aa12.94□□□□□ -0.34
GMDS-208ENST00000530927 ZNF876PQ49A33 203 aa12.94□□□□□ -0.34
GMDS-208ENST00000530927 OR4C5Q8NGB2 326 aa12.94□□□□□ -0.34
GMDS-208ENST00000530927 NAT8Q9UHE5 227 aa12.94□□□□□ -0.34
GMDS-208ENST00000530927 IGHV3-73A0A0B4J1V6 119 aa12.93□□□□□ -0.34
GMDS-208ENST00000530927 LOC100131303A0A0U1RQF7 123 aa12.93□□□□□ -0.34
GMDS-208ENST00000530927 B4DEV8 164 aa12.93□□□□□ -0.34
GMDS-208ENST00000530927 C15orf54Q8N8G6 183 aa12.93□□□□□ -0.34
GMDS-208ENST00000530927 BIRC6Q9NR09 4857 aa12.92□□□□□ -0.34
GMDS-208ENST00000530927 H3BVH4 76 aa12.92□□□□□ -0.34
GMDS-208ENST00000530927 RTL8CO15255 209 aa12.92□□□□□ -0.34
GMDS-208ENST00000530927 PRR27Q6MZM9 219 aa12.92□□□□□ -0.34
GMDS-208ENST00000530927 LINC01551Q86U37 167 aa12.92□□□□□ -0.34
GMDS-208ENST00000530927 K7EN84 100 aa12.91□□□□□ -0.34
GMDS-208ENST00000530927 CFAP126Q5VTH2 177 aa12.91□□□□□ -0.34
GMDS-208ENST00000530927 DAZAP1Q96EP5 407 aaKnown RBP12.91□□□□□ -0.34
GMDS-208ENST00000530927 ICOSQ9Y6W8 199 aa12.91□□□□□ -0.34
GMDS-208ENST00000530927 S100A4P26447 101 aaKnown RBP12.9□□□□□ -0.34
GMDS-208ENST00000530927 ASIPP42127 132 aa12.9□□□□□ -0.34
GMDS-208ENST00000530927 RPL19P84098 196 aaKnown RBP12.9□□□□□ -0.34
GMDS-208ENST00000530927 JPT2Q9H910 190 aa12.9□□□□□ -0.34
GMDS-208ENST00000530927 K7EQD1 137 aa12.89□□□□□ -0.35
GMDS-208ENST00000530927 RS1O15537 224 aa12.89□□□□□ -0.35
GMDS-208ENST00000530927 GYPEP15421 78 aa12.89□□□□□ -0.35
GMDS-208ENST00000530927 FAM3BP58499 235 aaPredicted RBP12.89□□□□□ -0.35
GMDS-208ENST00000530927 RPL23P62829 140 aaKnown RBP12.89□□□□□ -0.35
GMDS-208ENST00000530927 KRTAP1-5Q9BYS1 174 aa12.89□□□□□ -0.35
GMDS-208ENST00000530927 C19orf71A6NCJ1 209 aa12.88□□□□□ -0.35
GMDS-208ENST00000530927 CBLN2Q8IUK8 224 aa12.88□□□□□ -0.35
GMDS-208ENST00000530927 Q9H8V8 135 aa12.88□□□□□ -0.35
GMDS-208ENST00000530927 PKD1P98161 4303 aa12.88□□□□□ -0.35
GMDS-208ENST00000530927 NBDYA0A0U1RRE5 68 aa12.88□□□□□ -0.35
GMDS-208ENST00000530927 ARMS2P0C7Q2 107 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 173.4 ms