RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 TRIAP1O43715 76 aa10.79□□□□□ -0.68
PCF11-204ENST00000530660 ORMDL2Q53FV1 153 aa10.79□□□□□ -0.68
PCF11-204ENST00000530660 TMEM170BQ5T4T1 132 aa10.79□□□□□ -0.68
PCF11-204ENST00000530660 SPANXN1Q5VSR9 72 aa10.79□□□□□ -0.68
PCF11-204ENST00000530660 LRRC75A-AS1Q8N1F1 130 aa10.79□□□□□ -0.68
PCF11-204ENST00000530660 LINC00527Q9UJ94 153 aa10.79□□□□□ -0.68
PCF11-204ENST00000530660 COL27A1Q8IZC6 1860 aaPredicted RBP10.79□□□□□ -0.68
PCF11-204ENST00000530660 WIPF1O43516 503 aa10.79□□□□□ -0.68
PCF11-204ENST00000530660 ADIPOQQ15848 244 aa10.79□□□□□ -0.68
PCF11-204ENST00000530660 TMEM200BQ69YZ2 307 aa10.79□□□□□ -0.68
PCF11-204ENST00000530660 IGHV1-46P01743 117 aa10.79□□□□□ -0.68
PCF11-204ENST00000530660 SUMO2P61956 95 aaKnown RBP10.78□□□□□ -0.68
PCF11-204ENST00000530660 MUSTN1Q8IVN3 82 aa10.78□□□□□ -0.68
PCF11-204ENST00000530660 DKK4Q9UBT3 224 aa10.78□□□□□ -0.68
PCF11-204ENST00000530660 CDX4O14627 284 aaPredicted RBP10.78□□□□□ -0.68
PCF11-204ENST00000530660 AMELXQ99217 191 aa10.78□□□□□ -0.68
PCF11-204ENST00000530660 IGHV7-4-1A0A0J9YVY3 117 aa10.78□□□□□ -0.68
PCF11-204ENST00000530660 GATA4P43694 442 aa10.78□□□□□ -0.68
PCF11-204ENST00000530660 UQCRQO14949 82 aa10.77□□□□□ -0.69
PCF11-204ENST00000530660 CCL8P80075 99 aa10.77□□□□□ -0.69
PCF11-204ENST00000530660 RNF182Q8N6D2 247 aa10.77□□□□□ -0.69
PCF11-204ENST00000530660 EEF1AKMT3Q96AZ1 226 aa10.77□□□□□ -0.69
PCF11-204ENST00000530660 TSHBP01222 138 aa10.76□□□□□ -0.69
PCF11-204ENST00000530660 ZNF883P0CG24 379 aa10.76□□□□□ -0.69
PCF11-204ENST00000530660 TMEM30BQ3MIR4 351 aa10.76□□□□□ -0.69
PCF11-204ENST00000530660 CACNA1BQ00975 2339 aa10.76□□□□□ -0.69
PCF11-204ENST00000530660 LINC00526Q96FQ7 95 aa10.76□□□□□ -0.69
PCF11-204ENST00000530660 IGHV3-64A0A075B6Q5 118 aa10.76□□□□□ -0.69
PCF11-204ENST00000530660 J3QQQ9 107 aa10.76□□□□□ -0.69
PCF11-204ENST00000530660 SRSF2Q01130 221 aaKnown RBP10.76□□□□□ -0.69
PCF11-204ENST00000530660 CLEC2BQ92478 149 aa10.76□□□□□ -0.69
PCF11-204ENST00000530660 SMAD5-AS1Q9Y6J3 95 aa10.76□□□□□ -0.69
PCF11-204ENST00000530660 TRAV41A0A0B4J266 112 aa10.75□□□□□ -0.69
PCF11-204ENST00000530660 IGHV3-35A0A0C4DH35 117 aa10.75□□□□□ -0.69
PCF11-204ENST00000530660 IGHV3-23P01764 117 aa10.75□□□□□ -0.69
PCF11-204ENST00000530660 CYSTM1Q9H1C7 97 aa10.75□□□□□ -0.69
PCF11-204ENST00000530660 CACNA1GO43497 2377 aa10.75□□□□□ -0.69
PCF11-204ENST00000530660 OR13C6PQ8NH95 151 aa10.75□□□□□ -0.69
PCF11-204ENST00000530660 TMEM190Q8WZ59 177 aa10.75□□□□□ -0.69
PCF11-204ENST00000530660 METTL26Q96S19 204 aa10.75□□□□□ -0.69
PCF11-204ENST00000530660 IGLV3-9A0A075B6K5 115 aa10.74□□□□□ -0.69
PCF11-204ENST00000530660 CRYGBP07316 175 aa10.74□□□□□ -0.69
PCF11-204ENST00000530660 GFRALQ6UXV0 394 aa10.74□□□□□ -0.69
PCF11-204ENST00000530660 Q6ZSV7 163 aa10.74□□□□□ -0.69
PCF11-204ENST00000530660 A0A0B4J2C4 111 aa10.74□□□□□ -0.69
PCF11-204ENST00000530660 LGALS3P17931 250 aaKnown RBP10.74□□□□□ -0.69
PCF11-204ENST00000530660 ZNRF2Q8NHG8 242 aa10.74□□□□□ -0.69
PCF11-204ENST00000530660 IGHG3P01860 377 aa10.74□□□□□ -0.69
PCF11-204ENST00000530660 TEX36Q5VZQ5 186 aa10.74□□□□□ -0.69
PCF11-204ENST00000530660 SMCR5Q8TEV8 140 aa10.74□□□□□ -0.69
PCF11-204ENST00000530660 FAM240AA0A1B0GVK7 77 aa10.73□□□□□ -0.69
PCF11-204ENST00000530660 A0A1B0GX51 115 aa10.73□□□□□ -0.69
PCF11-204ENST00000530660 M0R381 172 aa10.73□□□□□ -0.69
PCF11-204ENST00000530660 GAGE2AQ6NT46 116 aa10.73□□□□□ -0.69
PCF11-204ENST00000530660 KIR2DL5BQ8NHK3 375 aa10.73□□□□□ -0.69
PCF11-204ENST00000530660 IGFBPL1Q8WX77 278 aa10.73□□□□□ -0.69
PCF11-204ENST00000530660 LINC01600Q96MT4 127 aa10.73□□□□□ -0.69
PCF11-204ENST00000530660 DLX6P56179 175 aa10.73□□□□□ -0.69
PCF11-204ENST00000530660 RPL39P62891 51 aaKnown RBP10.73□□□□□ -0.69
PCF11-204ENST00000530660 hADV29S1A0JD25 119 aa10.72□□□□□ -0.69
PCF11-204ENST00000530660 RNF223E7ERA6 249 aa10.72□□□□□ -0.69
PCF11-204ENST00000530660 F5H768 121 aa10.72□□□□□ -0.69
PCF11-204ENST00000530660 C4orf26Q17RF5 130 aa10.72□□□□□ -0.69
PCF11-204ENST00000530660 UBE2E1P51965 193 aa10.72□□□□□ -0.69
PCF11-204ENST00000530660 LYPD2Q6UXB3 125 aa10.72□□□□□ -0.69
PCF11-204ENST00000530660 C22orf34Q6ZV56 151 aa10.72□□□□□ -0.69
PCF11-204ENST00000530660 TRAV17A0A0B4J275 112 aa10.71□□□□□ -0.69
PCF11-204ENST00000530660 TRBV30A0A0K0K1B3 111 aa10.71□□□□□ -0.69
PCF11-204ENST00000530660 MGPP08493 103 aa10.71□□□□□ -0.69
PCF11-204ENST00000530660 TP53TG1Q9Y2A0 90 aa10.71□□□□□ -0.69
PCF11-204ENST00000530660 MSRB2Q9Y3D2 182 aa10.71□□□□□ -0.69
PCF11-204ENST00000530660 ABCA4P78363 2273 aa10.71□□□□□ -0.69
PCF11-204ENST00000530660 ZDBF2Q9HCK1 2354 aa10.71□□□□□ -0.69
PCF11-204ENST00000530660 PRRC2AP48634 2157 aaKnown RBP10.71□□□□□ -0.69
PCF11-204ENST00000530660 GPR179Q6PRD1 2367 aa10.71□□□□□ -0.69
PCF11-204ENST00000530660 C17orf100A8MU93 164 aa10.71□□□□□ -0.69
PCF11-204ENST00000530660 TMEM219Q86XT9 240 aa10.71□□□□□ -0.69
PCF11-204ENST00000530660 SLC50A1Q9BRV3 221 aa10.71□□□□□ -0.69
PCF11-204ENST00000530660 A0A0G2JNJ9 132 aa10.71□□□□□ -0.7
PCF11-204ENST00000530660 PRSS33Q8NF86 280 aa10.71□□□□□ -0.7
PCF11-204ENST00000530660 Q9UFV3 132 aa10.71□□□□□ -0.7
PCF11-204ENST00000530660 ZNF256Q9Y2P7 627 aaPredicted RBP10.71□□□□□ -0.7
PCF11-204ENST00000530660 SEM1Q6ZVN7 128 aa10.7□□□□□ -0.7
PCF11-204ENST00000530660 AGPAT4-IT1Q9H0P7 198 aa10.7□□□□□ -0.7
PCF11-204ENST00000530660 ADGRG4Q8IZF6 3080 aa10.7□□□□□ -0.7
PCF11-204ENST00000530660 ADARB2-AS1A8MUL3 147 aa10.7□□□□□ -0.7
PCF11-204ENST00000530660 ZNF580Q9UK33 172 aa10.7□□□□□ -0.7
PCF11-204ENST00000530660 NACAE9PAV3 2078 aa10.69□□□□□ -0.7
PCF11-204ENST00000530660 TMEM223A0PJW6 202 aa10.69□□□□□ -0.7
PCF11-204ENST00000530660 HRCT1Q6UXD1 115 aa10.69□□□□□ -0.7
PCF11-204ENST00000530660 ICOSQ9Y6W8 199 aa10.69□□□□□ -0.7
PCF11-204ENST00000530660 TRAV8-3A0A0A6YYJ7 113 aa10.69□□□□□ -0.7
PCF11-204ENST00000530660 H3BT86 120 aa10.69□□□□□ -0.7
PCF11-204ENST00000530660 IGHV3-66A0A0C4DH42 116 aa10.69□□□□□ -0.7
PCF11-204ENST00000530660 OXTP01178 125 aa10.69□□□□□ -0.7
PCF11-204ENST00000530660 PRSS2P07478 247 aa10.69□□□□□ -0.7
PCF11-204ENST00000530660 COX7CP15954 63 aa10.68□□□□□ -0.7
PCF11-204ENST00000530660 LINC00311Q8N616 119 aa10.68□□□□□ -0.7
PCF11-204ENST00000530660 IMUPQ9GZP8 106 aa10.68□□□□□ -0.7
PCF11-204ENST00000530660 IGHV3OR16-13A0A075B7E8 117 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 419.8 ms