RNA–Protein interactions for RNA: ENST00000530279.5

C11orf54-208, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-208ENST00000530279 SPART-AS1P0CW21 52 aa2.74□□□□□ -1.97
C11orf54-208ENST00000530279 LEPP41159 167 aa2.74□□□□□ -1.97
C11orf54-208ENST00000530279 CSN1S1P47710 185 aa2.74□□□□□ -1.97
C11orf54-208ENST00000530279 CD300CQ08708 224 aa2.74□□□□□ -1.97
C11orf54-208ENST00000530279 LAGE3Q14657 143 aa2.74□□□□□ -1.97
C11orf54-208ENST00000530279 RRN3P1Q2M238 152 aa2.74□□□□□ -1.97
C11orf54-208ENST00000530279 FAM74A1Q5RGS3 127 aa2.74□□□□□ -1.97
C11orf54-208ENST00000530279 OR4B1Q8NGF8 309 aa2.74□□□□□ -1.97
C11orf54-208ENST00000530279 SUN5Q8TC36 379 aa2.74□□□□□ -1.97
C11orf54-208ENST00000530279 PYGO2Q9BRQ0 406 aa2.74□□□□□ -1.97
C11orf54-208ENST00000530279 PAXXQ9BUH6 204 aa2.74□□□□□ -1.97
C11orf54-208ENST00000530279 RETNQ9HD89 108 aa2.74□□□□□ -1.97
C11orf54-208ENST00000530279 OTORQ9NRC9 128 aa2.74□□□□□ -1.97
C11orf54-208ENST00000530279 ZNF586Q9NXT0 402 aa2.74□□□□□ -1.97
C11orf54-208ENST00000530279 TP53TG3Q9ULZ0 132 aa2.74□□□□□ -1.97
C11orf54-208ENST00000530279 ARL2-SNX15V9GYD0 113 aa2.74□□□□□ -1.97
C11orf54-208ENST00000530279 HUWE1Q7Z6Z7 4374 aaKnown RBP2.74□□□□□ -1.97
C11orf54-208ENST00000530279 TRAV10A0A0B4J240 114 aa2.73□□□□□ -1.97
C11orf54-208ENST00000530279 A0A1W2PRE2 83 aa2.73□□□□□ -1.97
C11orf54-208ENST00000530279 KLLNB2CW77 178 aa2.73□□□□□ -1.97
C11orf54-208ENST00000530279 CRXO43186 299 aaPredicted RBP2.73□□□□□ -1.97
C11orf54-208ENST00000530279 OR7C2O60412 319 aa2.73□□□□□ -1.97
C11orf54-208ENST00000530279 STAG3L2P0CL84 134 aa2.73□□□□□ -1.97
C11orf54-208ENST00000530279 STAG3L3P0CL85 134 aa2.73□□□□□ -1.97
C11orf54-208ENST00000530279 RBMY1A1P0DJD3 496 aaKnown RBP2.73□□□□□ -1.97
C11orf54-208ENST00000530279 RBMY1CP0DJD4 496 aa2.73□□□□□ -1.97
C11orf54-208ENST00000530279 HIST1H1AQ02539 215 aaPredicted RBP2.73□□□□□ -1.97
C11orf54-208ENST00000530279 DAZ2Q13117 558 aaKnown RBP2.73□□□□□ -1.97
C11orf54-208ENST00000530279 RBMY1FQ15415 496 aaKnown RBP2.73□□□□□ -1.97
C11orf54-208ENST00000530279 GDF5OSQ5U4N7 250 aa2.73□□□□□ -1.97
C11orf54-208ENST00000530279 LGALS9CQ6DKI2 356 aa2.73□□□□□ -1.97
C11orf54-208ENST00000530279 EIF5AL1Q6IS14 154 aaKnown RBP2.73□□□□□ -1.97
C11orf54-208ENST00000530279 DPPA3Q6W0C5 159 aa2.73□□□□□ -1.97
C11orf54-208ENST00000530279 C1orf158Q8N1D5 194 aa2.73□□□□□ -1.97
C11orf54-208ENST00000530279 POM121L12Q8N7R1 296 aa2.73□□□□□ -1.97
C11orf54-208ENST00000530279 ZNF680Q8NEM1 530 aa2.73□□□□□ -1.97
C11orf54-208ENST00000530279 TMEM263Q8WUH6 116 aaKnown RBP2.73□□□□□ -1.97
C11orf54-208ENST00000530279 FXYD5Q96DB9 178 aa2.73□□□□□ -1.97
C11orf54-208ENST00000530279 C16orf74Q96GX8 76 aa2.73□□□□□ -1.97
C11orf54-208ENST00000530279 FAM19A4Q96LR4 140 aa2.73□□□□□ -1.97
C11orf54-208ENST00000530279 C18orf15Q96N68 181 aa2.73□□□□□ -1.97
C11orf54-208ENST00000530279 VGLL1Q99990 258 aa2.73□□□□□ -1.97
C11orf54-208ENST00000530279 TMEM208Q9BTX3 173 aa2.73□□□□□ -1.97
C11orf54-208ENST00000530279 SLC25A2Q9BXI2 301 aa2.73□□□□□ -1.97
C11orf54-208ENST00000530279 ACTR3CQ9C0K3 210 aaPredicted RBP2.73□□□□□ -1.97
C11orf54-208ENST00000530279 WFDC1Q9HC57 220 aa2.73□□□□□ -1.97
C11orf54-208ENST00000530279 TMEM167BQ9NRX6 74 aa2.73□□□□□ -1.97
C11orf54-208ENST00000530279 MUC4Q99102 2169 aa2.73□□□□□ -1.97
C11orf54-208ENST00000530279 CSMD3Q7Z407 3707 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 TRAV9-2A0A087WT02 112 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 FXYD6-FXYD2A0A087WZ82 144 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 TRAV5A0A0B4J249 113 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 CTXND1A0A1B0GTU2 59 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 F6UB75 175 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 G3V3Q6 166 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 H3BNG1 76 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 SLC17A3O00476 420 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 CXorf1O96002 111 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 SEC11BP0C7V7 166 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 ATP6V0CP27449 155 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 HLA-DMBP28068 263 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 CDC34P49427 236 aaPredicted RBP2.72□□□□□ -1.97
C11orf54-208ENST00000530279 RAB5CP51148 216 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 ZNF138P52744 262 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 UBE2L3P68036 154 aaKnown RBP2.72□□□□□ -1.97
C11orf54-208ENST00000530279 LGALS9BQ3B8N2 356 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 TDRG1Q3Y452 100 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 LGALSLQ3ZCW2 172 aaPredicted RBP2.72□□□□□ -1.97
C11orf54-208ENST00000530279 GCSAMLQ5JQS6 135 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 IBA57Q5T440 356 aaKnown RBP2.72□□□□□ -1.97
C11orf54-208ENST00000530279 TMEM78Q5T7P6 136 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 MIR17HGQ75NE6 70 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 TCTE3Q8IZS6 198 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 KCNRGQ8N5I3 272 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 RPP25LQ8N5L8 163 aaKnown RBP2.72□□□□□ -1.97
C11orf54-208ENST00000530279 RNF182Q8N6D2 247 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 LINC00612Q8N6U2 182 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 C5orf17Q8NAS9 161 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 OR10G4Q8NGN3 311 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 OR10G9Q8NGN4 311 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 STOML3Q8TAV4 291 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 CMTM2Q8TAZ6 248 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 TXNDC17Q9BRA2 123 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 AGPAT4-IT1Q9H0P7 198 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 SLC35B3Q9H1N7 401 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 ZNF492Q9P255 531 aa2.72□□□□□ -1.97
C11orf54-208ENST00000530279 TIMM8BQ9Y5J9 83 aaPredicted RBP2.72□□□□□ -1.97
C11orf54-208ENST00000530279 DEFB131BA0A096LNP1 70 aa2.71□□□□□ -1.98
C11orf54-208ENST00000530279 TRAV1-1A0A0B4J248 108 aa2.71□□□□□ -1.98
C11orf54-208ENST00000530279 IGKV3D-20A0A0C4DH25 116 aa2.71□□□□□ -1.98
C11orf54-208ENST00000530279 C7orf71A4D174 169 aa2.71□□□□□ -1.98
C11orf54-208ENST00000530279 M0R2Z0 102 aa2.71□□□□□ -1.98
C11orf54-208ENST00000530279 M0R3E3 92 aa2.71□□□□□ -1.98
C11orf54-208ENST00000530279 ZNF324O75467 553 aaPredicted RBP2.71□□□□□ -1.98
C11orf54-208ENST00000530279 S100A9P06702 114 aaKnown RBP2.71□□□□□ -1.98
C11orf54-208ENST00000530279 GPX1P07203 203 aa2.71□□□□□ -1.98
C11orf54-208ENST00000530279 PYYP10082 97 aa2.71□□□□□ -1.98
C11orf54-208ENST00000530279 GCHFRP30047 84 aa2.71□□□□□ -1.98
C11orf54-208ENST00000530279 RANP62826 216 aaKnown RBP2.71□□□□□ -1.98
C11orf54-208ENST00000530279 SLAQ13239 276 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms