RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 K7EQD1 137 aa10.61□□□□□ -0.71
CCDC90B-215ENST00000529745 PAGE4O60829 102 aa10.61□□□□□ -0.71
CCDC90B-215ENST00000529745 LTAP01374 205 aa10.61□□□□□ -0.71
CCDC90B-215ENST00000529745 C1QBP02746 253 aa10.61□□□□□ -0.71
CCDC90B-215ENST00000529745 H2AFB1P0C5Y9 115 aa10.61□□□□□ -0.71
CCDC90B-215ENST00000529745 GATA1P15976 413 aaPredicted RBP10.61□□□□□ -0.71
CCDC90B-215ENST00000529745 CRIP1P50238 77 aa10.61□□□□□ -0.71
CCDC90B-215ENST00000529745 RAB5CP51148 216 aa10.61□□□□□ -0.71
CCDC90B-215ENST00000529745 UBE2G1P62253 170 aa10.61□□□□□ -0.71
CCDC90B-215ENST00000529745 CST9LP1Q5W188 147 aa10.61□□□□□ -0.71
CCDC90B-215ENST00000529745 NEGR1Q7Z3B1 354 aa10.61□□□□□ -0.71
CCDC90B-215ENST00000529745 ZC2HC1AQ96GY0 325 aa10.61□□□□□ -0.71
CCDC90B-215ENST00000529745 KRTAP1-5Q9BYS1 174 aa10.61□□□□□ -0.71
CCDC90B-215ENST00000529745 TRAV1-1A0A0B4J248 108 aa10.6□□□□□ -0.71
CCDC90B-215ENST00000529745 C9JCJ5 164 aa10.6□□□□□ -0.71
CCDC90B-215ENST00000529745 S100A9P06702 114 aaKnown RBP10.6□□□□□ -0.71
CCDC90B-215ENST00000529745 ZNF674Q2M3X9 581 aa10.6□□□□□ -0.71
CCDC90B-215ENST00000529745 ZNF506Q5JVG8 444 aa10.6□□□□□ -0.71
CCDC90B-215ENST00000529745 CFAP126Q5VTH2 177 aa10.6□□□□□ -0.71
CCDC90B-215ENST00000529745 EIF5AL1Q6IS14 154 aaKnown RBP10.6□□□□□ -0.71
CCDC90B-215ENST00000529745 LYPD5Q6UWN5 251 aa10.6□□□□□ -0.71
CCDC90B-215ENST00000529745 IL36BQ9NZH7 164 aa10.6□□□□□ -0.71
CCDC90B-215ENST00000529745 TRBV6-4A0A1B0GX49 114 aa10.59□□□□□ -0.71
CCDC90B-215ENST00000529745 PGPEP1LA6NFU8 196 aa10.59□□□□□ -0.71
CCDC90B-215ENST00000529745 SIVA1O15304 175 aa10.59□□□□□ -0.71
CCDC90B-215ENST00000529745 SRIP30626 198 aa10.59□□□□□ -0.71
CCDC90B-215ENST00000529745 AKR1C3P42330 323 aa10.59□□□□□ -0.71
CCDC90B-215ENST00000529745 SH2D6Q7Z4S9 175 aa10.59□□□□□ -0.71
CCDC90B-215ENST00000529745 PCNPQ8WW12 178 aaKnown RBP10.59□□□□□ -0.71
CCDC90B-215ENST00000529745 TXNDC17Q9BRA2 123 aa10.59□□□□□ -0.71
CCDC90B-215ENST00000529745 KRBOX1C9JBD0 128 aa10.58□□□□□ -0.72
CCDC90B-215ENST00000529745 SH2D1AO60880 128 aa10.58□□□□□ -0.72
CCDC90B-215ENST00000529745 GYPEP15421 78 aa10.58□□□□□ -0.72
CCDC90B-215ENST00000529745 ASIPP42127 132 aa10.58□□□□□ -0.72
CCDC90B-215ENST00000529745 SULT1A2P50226 295 aa10.58□□□□□ -0.72
CCDC90B-215ENST00000529745 TIRAPP58753 221 aa10.58□□□□□ -0.72
CCDC90B-215ENST00000529745 LINC01559Q495D7 138 aa10.58□□□□□ -0.72
CCDC90B-215ENST00000529745 FAM162BQ5T6X4 162 aa10.58□□□□□ -0.72
CCDC90B-215ENST00000529745 ZNF575Q86XF7 245 aa10.58□□□□□ -0.72
CCDC90B-215ENST00000529745 MLST8Q9BVC4 326 aa10.58□□□□□ -0.72
CCDC90B-215ENST00000529745 A8MWV9 139 aa10.57□□□□□ -0.72
CCDC90B-215ENST00000529745 B4DEV8 164 aa10.57□□□□□ -0.72
CCDC90B-215ENST00000529745 K7EP13 123 aa10.57□□□□□ -0.72
CCDC90B-215ENST00000529745 NXPH4O95158 308 aa10.57□□□□□ -0.72
CCDC90B-215ENST00000529745 ZFP2Q6ZN57 461 aa10.57□□□□□ -0.72
CCDC90B-215ENST00000529745 MANBALQ9NQG1 85 aa10.57□□□□□ -0.72
CCDC90B-215ENST00000529745 SCO2A0A1W2PP80 73 aa10.56□□□□□ -0.72
CCDC90B-215ENST00000529745 CXCL1P09341 107 aa10.56□□□□□ -0.72
CCDC90B-215ENST00000529745 MGST1P10620 155 aaKnown RBP10.56□□□□□ -0.72
CCDC90B-215ENST00000529745 S100A4P26447 101 aaKnown RBP10.56□□□□□ -0.72
CCDC90B-215ENST00000529745 SLC51BQ86UW2 128 aa10.56□□□□□ -0.72
CCDC90B-215ENST00000529745 SLC25A29Q8N8R3 303 aa10.56□□□□□ -0.72
CCDC90B-215ENST00000529745 C11orf52Q96A22 123 aa10.56□□□□□ -0.72
CCDC90B-215ENST00000529745 SCRT2Q9NQ03 307 aa10.56□□□□□ -0.72
CCDC90B-215ENST00000529745 TNP2Q05952 138 aa10.55□□□□□ -0.72
CCDC90B-215ENST00000529745 RHOHQ15669 191 aa10.55□□□□□ -0.72
CCDC90B-215ENST00000529745 PARLQ9H300 379 aa10.55□□□□□ -0.72
CCDC90B-215ENST00000529745 DYNC1H1Q14204 4646 aaKnown RBP10.54□□□□□ -0.72
CCDC90B-215ENST00000529745 LOC100131303A0A0U1RQF7 123 aa10.54□□□□□ -0.72
CCDC90B-215ENST00000529745 A0A1B0GV50 99 aa10.54□□□□□ -0.72
CCDC90B-215ENST00000529745 TEX46H3BTG2 121 aa10.54□□□□□ -0.72
CCDC90B-215ENST00000529745 UFSP1Q6NVU6 142 aa10.54□□□□□ -0.72
CCDC90B-215ENST00000529745 PRADC1Q9BSG0 188 aa10.54□□□□□ -0.72
CCDC90B-215ENST00000529745 H3BVH4 76 aa10.53□□□□□ -0.72
CCDC90B-215ENST00000529745 ARMS2P0C7Q2 107 aa10.53□□□□□ -0.72
CCDC90B-215ENST00000529745 DNAH10OSP0CZ25 163 aa10.53□□□□□ -0.72
CCDC90B-215ENST00000529745 CCL20P78556 96 aa10.53□□□□□ -0.72
CCDC90B-215ENST00000529745 AKAP14Q86UN6 197 aa10.53□□□□□ -0.72
CCDC90B-215ENST00000529745 DNAH11Q96DT5 4516 aa10.52□□□□□ -0.73
CCDC90B-215ENST00000529745 M0R036 132 aa10.52□□□□□ -0.73
CCDC90B-215ENST00000529745 Q6ZRN7 208 aaPredicted RBP10.52□□□□□ -0.73
CCDC90B-215ENST00000529745 BAGE2Q86Y30 109 aa10.52□□□□□ -0.73
CCDC90B-215ENST00000529745 SYT8Q8NBV8 401 aa10.52□□□□□ -0.73
CCDC90B-215ENST00000529745 RHODO00212 210 aa10.51□□□□□ -0.73
CCDC90B-215ENST00000529745 LINC00694P0DN24 101 aa10.51□□□□□ -0.73
CCDC90B-215ENST00000529745 LINC00315P59091 139 aa10.51□□□□□ -0.73
CCDC90B-215ENST00000529745 WFDC10BQ8IUB3 73 aa10.51□□□□□ -0.73
CCDC90B-215ENST00000529745 C9orf62Q8N4C0 152 aa10.51□□□□□ -0.73
CCDC90B-215ENST00000529745 SMIM12Q96EX1 92 aa10.51□□□□□ -0.73
CCDC90B-215ENST00000529745 GNG13Q9P2W3 67 aa10.51□□□□□ -0.73
CCDC90B-215ENST00000529745 LY96Q9Y6Y9 160 aa10.51□□□□□ -0.73
CCDC90B-215ENST00000529745 HSPG2P98160 4391 aa10.5□□□□□ -0.73
CCDC90B-215ENST00000529745 TRAV9-2A0A087WT02 112 aa10.5□□□□□ -0.73
CCDC90B-215ENST00000529745 GRIFINA4D1Z8 144 aa10.5□□□□□ -0.73
CCDC90B-215ENST00000529745 RPL35P42766 123 aaKnown RBP10.5□□□□□ -0.73
CCDC90B-215ENST00000529745 NHLRC2Q8NBF2 726 aa10.5□□□□□ -0.73
CCDC90B-215ENST00000529745 SFRP2Q96HF1 295 aa10.5□□□□□ -0.73
CCDC90B-215ENST00000529745 PHLDA3Q9Y5J5 127 aa10.5□□□□□ -0.73
CCDC90B-215ENST00000529745 IGHV3-73A0A0B4J1V6 119 aa10.49□□□□□ -0.73
CCDC90B-215ENST00000529745 TAGLN2P37802 199 aaKnown RBP10.49□□□□□ -0.73
CCDC90B-215ENST00000529745 MEF2BQ02080 365 aaPredicted RBP10.49□□□□□ -0.73
CCDC90B-215ENST00000529745 Q6ZSN1 163 aa10.49□□□□□ -0.73
CCDC90B-215ENST00000529745 ZFP82Q8N141 532 aa10.49□□□□□ -0.73
CCDC90B-215ENST00000529745 SSBP4Q9BWG4 385 aaPredicted RBP10.49□□□□□ -0.73
CCDC90B-215ENST00000529745 JPT2Q9H910 190 aa10.49□□□□□ -0.73
CCDC90B-215ENST00000529745 SNAI2O43623 268 aa10.48□□□□□ -0.73
CCDC90B-215ENST00000529745 PDE6DO43924 150 aa10.48□□□□□ -0.73
CCDC90B-215ENST00000529745 IFNA1P01562 189 aa10.48□□□□□ -0.73
CCDC90B-215ENST00000529745 EVI2AP22794 236 aa10.48□□□□□ -0.73
CCDC90B-215ENST00000529745 LELP1Q5T871 98 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms