RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 COX8CQ7Z4L0 72 aa4.48□□□□□ -1.69
CD44-221ENST00000526000 FAM19A4Q96LR4 140 aa4.48□□□□□ -1.69
CD44-221ENST00000526000 AGPAT4-IT1Q9H0P7 198 aa4.48□□□□□ -1.69
CD44-221ENST00000526000 KLLNB2CW77 178 aa4.47□□□□□ -1.69
CD44-221ENST00000526000 J3QL48 77 aa4.47□□□□□ -1.69
CD44-221ENST00000526000 SFTA3P0C7M3 94 aa4.47□□□□□ -1.69
CD44-221ENST00000526000 GCSHP23434 173 aa4.47□□□□□ -1.69
CD44-221ENST00000526000 IFITM2Q01629 132 aa4.47□□□□□ -1.69
CD44-221ENST00000526000 DAZ2Q13117 558 aaKnown RBP4.47□□□□□ -1.69
CD44-221ENST00000526000 FAM74A3Q4VXF1 159 aa4.47□□□□□ -1.69
CD44-221ENST00000526000 PYGO2Q9BRQ0 406 aa4.47□□□□□ -1.69
CD44-221ENST00000526000 EIF5A2Q9GZV4 153 aaKnown RBP4.47□□□□□ -1.69
CD44-221ENST00000526000 BIN3Q9NQY0 253 aa4.47□□□□□ -1.69
CD44-221ENST00000526000 PSG8Q9UQ74 426 aa4.47□□□□□ -1.69
CD44-221ENST00000526000 HHLA3Q9XRX5 114 aa4.47□□□□□ -1.69
CD44-221ENST00000526000 ICOSQ9Y6W8 199 aa4.47□□□□□ -1.69
CD44-221ENST00000526000 DMBT1Q9UGM3 2413 aaPredicted RBP4.46□□□□□ -1.69
CD44-221ENST00000526000 IGKV2-40A0A087WW87 121 aaPredicted RBP4.46□□□□□ -1.7
CD44-221ENST00000526000 C7orf71A4D174 169 aa4.46□□□□□ -1.7
CD44-221ENST00000526000 C9JCJ5 164 aa4.46□□□□□ -1.7
CD44-221ENST00000526000 H3BNG1 76 aa4.46□□□□□ -1.7
CD44-221ENST00000526000 FAM229AH3BQW9 127 aa4.46□□□□□ -1.7
CD44-221ENST00000526000 LTAP01374 205 aa4.46□□□□□ -1.7
CD44-221ENST00000526000 IGKV2D-40P01614 121 aaPredicted RBP4.46□□□□□ -1.7
CD44-221ENST00000526000 GPX1P07203 203 aa4.46□□□□□ -1.7
CD44-221ENST00000526000 GNG5P63218 68 aa4.46□□□□□ -1.7
CD44-221ENST00000526000 ZNF415Q09FC8 603 aa4.46□□□□□ -1.7
CD44-221ENST00000526000 FHL2Q14192 279 aa4.46□□□□□ -1.7
CD44-221ENST00000526000 SMUG1Q53HV7 270 aa4.46□□□□□ -1.7
CD44-221ENST00000526000 TOR2AQ5JU69 321 aa4.46□□□□□ -1.7
CD44-221ENST00000526000 MUC21Q5SSG8 566 aa4.46□□□□□ -1.7
CD44-221ENST00000526000 Q6AWC8 147 aa4.46□□□□□ -1.7
CD44-221ENST00000526000 UQCC3Q6UW78 93 aa4.46□□□□□ -1.7
CD44-221ENST00000526000 WFDC10BQ8IUB3 73 aa4.46□□□□□ -1.7
CD44-221ENST00000526000 EIF4E3Q8N5X7 224 aaKnown RBP4.46□□□□□ -1.7
CD44-221ENST00000526000 C11orf72Q8NBR9 251 aa4.46□□□□□ -1.7
CD44-221ENST00000526000 C18orf15Q96N68 181 aa4.46□□□□□ -1.7
CD44-221ENST00000526000 VGLL1Q99990 258 aa4.46□□□□□ -1.7
CD44-221ENST00000526000 LINC00467Q9BRT7 94 aa4.46□□□□□ -1.7
CD44-221ENST00000526000 TREM1Q9NP99 234 aa4.46□□□□□ -1.7
CD44-221ENST00000526000 RPH3ALQ9UNE2 315 aa4.46□□□□□ -1.7
CD44-221ENST00000526000 LY96Q9Y6Y9 160 aa4.46□□□□□ -1.7
CD44-221ENST00000526000 HERC1Q15751 4861 aa4.46□□□□□ -1.7
CD44-221ENST00000526000 TRAV21A0A0B4J279 112 aa4.45□□□□□ -1.7
CD44-221ENST00000526000 TRGV4A0A0C4DH28 118 aa4.45□□□□□ -1.7
CD44-221ENST00000526000 SCO2A0A1W2PP80 73 aa4.45□□□□□ -1.7
CD44-221ENST00000526000 LCE2BO14633 110 aa4.45□□□□□ -1.7
CD44-221ENST00000526000 SPINK4O60575 86 aa4.45□□□□□ -1.7
CD44-221ENST00000526000 IGLV2-11P01706 119 aa4.45□□□□□ -1.7
CD44-221ENST00000526000 GYPEP15421 78 aa4.45□□□□□ -1.7
CD44-221ENST00000526000 RPL35P42766 123 aaKnown RBP4.45□□□□□ -1.7
CD44-221ENST00000526000 CRYBA4P53673 196 aa4.45□□□□□ -1.7
CD44-221ENST00000526000 MRPL23Q16540 153 aaKnown RBP4.45□□□□□ -1.7
CD44-221ENST00000526000 PRR9Q5T870 116 aa4.45□□□□□ -1.7
CD44-221ENST00000526000 PRNTQ86SH4 94 aa4.45□□□□□ -1.7
CD44-221ENST00000526000 Q86TA4 180 aa4.45□□□□□ -1.7
CD44-221ENST00000526000 BAGE2Q86Y30 109 aa4.45□□□□□ -1.7
CD44-221ENST00000526000 TMEM183AQ8IXX5 376 aa4.45□□□□□ -1.7
CD44-221ENST00000526000 ZFAND2AQ8N6M9 145 aa4.45□□□□□ -1.7
CD44-221ENST00000526000 KCNS1Q96KK3 526 aa4.45□□□□□ -1.7
CD44-221ENST00000526000 MSRB1Q9NZV6 116 aa4.45□□□□□ -1.7
CD44-221ENST00000526000 FAM30AQ9NZY2 134 aa4.45□□□□□ -1.7
CD44-221ENST00000526000 PRO0255Q9UI72 69 aa4.45□□□□□ -1.7
CD44-221ENST00000526000 FAT1Q14517 4588 aa4.45□□□□□ -1.7
CD44-221ENST00000526000 IGHV1OR15-1A0A075B7D0 117 aa4.44□□□□□ -1.7
CD44-221ENST00000526000 TRAV9-2A0A087WT02 112 aa4.44□□□□□ -1.7
CD44-221ENST00000526000 IGLV5-52A0A0A0MRZ9 124 aa4.44□□□□□ -1.7
CD44-221ENST00000526000 TRAV8-1A0A0A6YYK1 113 aa4.44□□□□□ -1.7
CD44-221ENST00000526000 IGHV3-16A0A0C4DH30 117 aa4.44□□□□□ -1.7
CD44-221ENST00000526000 LOC100131303A0A0U1RQF7 123 aa4.44□□□□□ -1.7
CD44-221ENST00000526000 LINC00862A6NCI5 91 aa4.44□□□□□ -1.7
CD44-221ENST00000526000 FABP5P3A8MUU1 101 aa4.44□□□□□ -1.7
CD44-221ENST00000526000 PSCAO43653 123 aa4.44□□□□□ -1.7
CD44-221ENST00000526000 PFN1P07737 140 aaKnown RBP4.44□□□□□ -1.7
CD44-221ENST00000526000 SRP19P09132 144 aaKnown RBP4.44□□□□□ -1.7
CD44-221ENST00000526000 GNG4P50150 75 aa4.44□□□□□ -1.7
CD44-221ENST00000526000 TCL1AP56279 114 aa4.44□□□□□ -1.7
CD44-221ENST00000526000 TDRG1Q3Y452 100 aa4.44□□□□□ -1.7
CD44-221ENST00000526000 FAM162BQ5T6X4 162 aa4.44□□□□□ -1.7
CD44-221ENST00000526000 NEGR1Q7Z3B1 354 aa4.44□□□□□ -1.7
CD44-221ENST00000526000 NFE4Q86UQ8 179 aa4.44□□□□□ -1.7
CD44-221ENST00000526000 ZNF479Q96JC4 524 aa4.44□□□□□ -1.7
CD44-221ENST00000526000 MLST8Q9BVC4 326 aa4.44□□□□□ -1.7
CD44-221ENST00000526000 Q9HAA7 133 aa4.44□□□□□ -1.7
CD44-221ENST00000526000 TRGV11A0A075B6L2 103 aa4.43□□□□□ -1.7
CD44-221ENST00000526000 TRAV34A0A0B4J273 112 aa4.43□□□□□ -1.7
CD44-221ENST00000526000 K7EQD1 137 aa4.43□□□□□ -1.7
CD44-221ENST00000526000 GCGP01275 180 aa4.43□□□□□ -1.7
CD44-221ENST00000526000 CRYGDP07320 174 aa4.43□□□□□ -1.7
CD44-221ENST00000526000 CXCL1P09341 107 aa4.43□□□□□ -1.7
CD44-221ENST00000526000 EVI2AP22794 236 aa4.43□□□□□ -1.7
CD44-221ENST00000526000 SRIP30626 198 aa4.43□□□□□ -1.7
CD44-221ENST00000526000 NDUFA5Q16718 116 aa4.43□□□□□ -1.7
CD44-221ENST00000526000 ANXA2RQ3ZCQ2 193 aa4.43□□□□□ -1.7
CD44-221ENST00000526000 CDPF1Q6NVV7 123 aa4.43□□□□□ -1.7
CD44-221ENST00000526000 Q6ZSN1 163 aa4.43□□□□□ -1.7
CD44-221ENST00000526000 Q8TAT8 98 aa4.43□□□□□ -1.7
CD44-221ENST00000526000 LINC00479Q96M42 142 aa4.43□□□□□ -1.7
CD44-221ENST00000526000 SMIM7Q9BQ49 75 aa4.43□□□□□ -1.7
CD44-221ENST00000526000 PARLQ9H300 379 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms