RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 ROBO1Q9Y6N7 1651 aa3.97□□□□□ -1.77
SQLE-203ENST00000518931 C3orf84H3BNL1 204 aa3.97□□□□□ -1.77
SQLE-203ENST00000518931 IGHV1-46P01743 117 aa3.97□□□□□ -1.77
SQLE-203ENST00000518931 IGHV4-34P06331 123 aa3.97□□□□□ -1.77
SQLE-203ENST00000518931 CCL3P10147 92 aa3.97□□□□□ -1.77
SQLE-203ENST00000518931 S100A3P33764 101 aa3.97□□□□□ -1.77
SQLE-203ENST00000518931 Q1RN00 199 aa3.97□□□□□ -1.77
SQLE-203ENST00000518931 PSMG4Q5JS54 123 aa3.97□□□□□ -1.77
SQLE-203ENST00000518931 LINC01006Q8NI28 216 aa3.97□□□□□ -1.77
SQLE-203ENST00000518931 FAM103A1Q9BTL3 118 aaKnown RBP3.97□□□□□ -1.77
SQLE-203ENST00000518931 DOCK8Q8NF50 2099 aa3.96□□□□□ -1.77
SQLE-203ENST00000518931 PIKFYVEQ9Y2I7 2098 aa3.96□□□□□ -1.77
SQLE-203ENST00000518931 IGKV6D-41A0A0C4DH26 115 aa3.96□□□□□ -1.78
SQLE-203ENST00000518931 C17orf51A8MQB3 221 aa3.96□□□□□ -1.78
SQLE-203ENST00000518931 SLC25A20O43772 301 aa3.96□□□□□ -1.78
SQLE-203ENST00000518931 NPYP01303 97 aa3.96□□□□□ -1.78
SQLE-203ENST00000518931 IGHV1-69P01742 117 aa3.96□□□□□ -1.78
SQLE-203ENST00000518931 CD28P10747 220 aa3.96□□□□□ -1.78
SQLE-203ENST00000518931 CBLN1P23435 193 aa3.96□□□□□ -1.78
SQLE-203ENST00000518931 ZNF791Q3KP31 576 aaPredicted RBP3.96□□□□□ -1.78
SQLE-203ENST00000518931 RPS27LQ71UM5 84 aaKnown RBP3.96□□□□□ -1.78
SQLE-203ENST00000518931 FAM216BQ8N7L0 139 aa3.96□□□□□ -1.78
SQLE-203ENST00000518931 CNEP1R1Q8N9A8 125 aa3.96□□□□□ -1.78
SQLE-203ENST00000518931 TSKUQ8WUA8 353 aa3.96□□□□□ -1.78
SQLE-203ENST00000518931 SMIM7Q9BQ49 75 aa3.96□□□□□ -1.78
SQLE-203ENST00000518931 A0A0G2JMZ2 1700 aa3.95□□□□□ -1.78
SQLE-203ENST00000518931 LRRC37A2A6NM11 1700 aa3.95□□□□□ -1.78
SQLE-203ENST00000518931 LRRC37AA6NMS7 1700 aa3.95□□□□□ -1.78
SQLE-203ENST00000518931 LY75O60449 1722 aa3.95□□□□□ -1.78
SQLE-203ENST00000518931 LRP4O75096 1905 aa3.95□□□□□ -1.78
SQLE-203ENST00000518931 NYNRINQ9P2P1 1898 aaKnown RBP3.95□□□□□ -1.78
SQLE-203ENST00000518931 STRCP1A6NGW2 1772 aa3.95□□□□□ -1.78
SQLE-203ENST00000518931 TMEM223A0PJW6 202 aa3.95□□□□□ -1.78
SQLE-203ENST00000518931 C2orf70A6NJV1 201 aa3.95□□□□□ -1.78
SQLE-203ENST00000518931 SH2D1AO60880 128 aa3.95□□□□□ -1.78
SQLE-203ENST00000518931 GYPBP06028 91 aa3.95□□□□□ -1.78
SQLE-203ENST00000518931 CGB3P0DN86 165 aa3.95□□□□□ -1.78
SQLE-203ENST00000518931 CGB7P0DN87 165 aa3.95□□□□□ -1.78
SQLE-203ENST00000518931 MPV17P39210 176 aa3.95□□□□□ -1.78
SQLE-203ENST00000518931 PCBD1P61457 104 aa3.95□□□□□ -1.78
SQLE-203ENST00000518931 ZNF117Q03924 483 aa3.95□□□□□ -1.78
SQLE-203ENST00000518931 CDK5R1Q15078 307 aa3.95□□□□□ -1.78
SQLE-203ENST00000518931 ZFP2Q6ZN57 461 aa3.95□□□□□ -1.78
SQLE-203ENST00000518931 C16orf47Q6ZP98 133 aaPredicted RBP3.95□□□□□ -1.78
SQLE-203ENST00000518931 SBSPONQ8IVN8 264 aa3.95□□□□□ -1.78
SQLE-203ENST00000518931 C15orf56Q8N910 161 aa3.95□□□□□ -1.78
SQLE-203ENST00000518931 C16orf74Q96GX8 76 aa3.95□□□□□ -1.78
SQLE-203ENST00000518931 UPK3BQ9BT76 320 aa3.95□□□□□ -1.78
SQLE-203ENST00000518931 DEFB126Q9BYW3 111 aa3.95□□□□□ -1.78
SQLE-203ENST00000518931 TAS2R4Q9NYW5 299 aa3.95□□□□□ -1.78
SQLE-203ENST00000518931 ARL2-SNX15V9GYD0 113 aa3.95□□□□□ -1.78
SQLE-203ENST00000518931 DSCAMO60469 2012 aa3.95□□□□□ -1.78
SQLE-203ENST00000518931 MYLKQ15746 1914 aa3.95□□□□□ -1.78
SQLE-203ENST00000518931 NRXN3Q9Y4C0 1643 aa3.95□□□□□ -1.78
SQLE-203ENST00000518931 TRBV7-7A0A0K0K1E9 115 aa3.94□□□□□ -1.78
SQLE-203ENST00000518931 A6NED7 52 aa3.94□□□□□ -1.78
SQLE-203ENST00000518931 OOSP1A8MZH6 123 aa3.94□□□□□ -1.78
SQLE-203ENST00000518931 CPSF4O95639 269 aaKnown RBP3.94□□□□□ -1.78
SQLE-203ENST00000518931 P0C879 139 aa3.94□□□□□ -1.78
SQLE-203ENST00000518931 SAA1P0DJI8 122 aaPredicted RBP3.94□□□□□ -1.78
SQLE-203ENST00000518931 CCL4P13236 92 aa3.94□□□□□ -1.78
SQLE-203ENST00000518931 NPC2P61916 151 aa3.94□□□□□ -1.78
SQLE-203ENST00000518931 BLCAPP62952 87 aa3.94□□□□□ -1.78
SQLE-203ENST00000518931 MIAQ16674 131 aa3.94□□□□□ -1.78
SQLE-203ENST00000518931 ASB16-AS1Q495Z4 193 aa3.94□□□□□ -1.78
SQLE-203ENST00000518931 SOSTDC1Q6X4U4 206 aa3.94□□□□□ -1.78
SQLE-203ENST00000518931 NTM-AS1Q6ZSK4 140 aa3.94□□□□□ -1.78
SQLE-203ENST00000518931 OR5AS1Q8N127 324 aa3.94□□□□□ -1.78
SQLE-203ENST00000518931 TTTY13Q9BZ97 58 aa3.94□□□□□ -1.78
SQLE-203ENST00000518931 ZNRD1Q9P1U0 126 aa3.94□□□□□ -1.78
SQLE-203ENST00000518931 HIGD1BQ9P298 99 aa3.94□□□□□ -1.78
SQLE-203ENST00000518931 TMEM14AQ9Y6G1 99 aa3.94□□□□□ -1.78
SQLE-203ENST00000518931 MCM3APO60318 1980 aa3.93□□□□□ -1.78
SQLE-203ENST00000518931 SSSCA1O60232 199 aa3.93□□□□□ -1.78
SQLE-203ENST00000518931 TLX1NBP0CAT3 122 aa3.93□□□□□ -1.78
SQLE-203ENST00000518931 FUSP35637 526 aaKnown RBP eCLIP3.93□□□□□ -1.78
SQLE-203ENST00000518931 KISS1Q15726 138 aa3.93□□□□□ -1.78
SQLE-203ENST00000518931 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.93□□□□□ -1.78
SQLE-203ENST00000518931 CFAP126Q5VTH2 177 aa3.93□□□□□ -1.78
SQLE-203ENST00000518931 PATE2Q6UY27 113 aa3.93□□□□□ -1.78
SQLE-203ENST00000518931 C3orf56Q8N813 242 aa3.93□□□□□ -1.78
SQLE-203ENST00000518931 PFN4Q8NHR9 129 aa3.93□□□□□ -1.78
SQLE-203ENST00000518931 MYOZ3Q8TDC0 251 aa3.93□□□□□ -1.78
SQLE-203ENST00000518931 GNG13Q9P2W3 67 aa3.93□□□□□ -1.78
SQLE-203ENST00000518931 PTPRBP23467 1997 aa3.93□□□□□ -1.78
SQLE-203ENST00000518931 COL5A3P25940 1745 aaPredicted RBP3.92□□□□□ -1.78
SQLE-203ENST00000518931 KIF26AQ9ULI4 1882 aaPredicted RBP3.92□□□□□ -1.78
SQLE-203ENST00000518931 A6NDX4 124 aa3.92□□□□□ -1.78
SQLE-203ENST00000518931 A8MWP4 228 aa3.92□□□□□ -1.78
SQLE-203ENST00000518931 F2Z2F3 143 aa3.92□□□□□ -1.78
SQLE-203ENST00000518931 MSMBP08118 114 aa3.92□□□□□ -1.78
SQLE-203ENST00000518931 KRTAP1-4P0C5Y4 121 aa3.92□□□□□ -1.78
SQLE-203ENST00000518931 DNAH10OSP0CZ25 163 aa3.92□□□□□ -1.78
SQLE-203ENST00000518931 CCL5P13501 91 aa3.92□□□□□ -1.78
SQLE-203ENST00000518931 COX7CP15954 63 aa3.92□□□□□ -1.78
SQLE-203ENST00000518931 CIRBPQ14011 172 aaKnown RBP3.92□□□□□ -1.78
SQLE-203ENST00000518931 Q8N2B8 174 aa3.92□□□□□ -1.78
SQLE-203ENST00000518931 Q8N9W7 124 aa3.92□□□□□ -1.78
SQLE-203ENST00000518931 SMCR5Q8TEV8 140 aa3.92□□□□□ -1.78
SQLE-203ENST00000518931 FGF13Q92913 245 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms