RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 NAGKQ9UJ70 344 aa4□□□□□ -1.77
SCARNA20.4-201ENST00000516969 IGHV1OR15-1A0A075B7D0 117 aa3.99□□□□□ -1.77
SCARNA20.4-201ENST00000516969 IGHV3-16A0A0C4DH30 117 aa3.99□□□□□ -1.77
SCARNA20.4-201ENST00000516969 LINC01546A6NGU7 62 aa3.99□□□□□ -1.77
SCARNA20.4-201ENST00000516969 PRSS47A8MTI9 375 aa3.99□□□□□ -1.77
SCARNA20.4-201ENST00000516969 D6R8Y8 96 aa3.99□□□□□ -1.77
SCARNA20.4-201ENST00000516969 IGKV3-20P01619 116 aa3.99□□□□□ -1.77
SCARNA20.4-201ENST00000516969 LINC00614P0C842 121 aa3.99□□□□□ -1.77
SCARNA20.4-201ENST00000516969 RBMY1A1P0DJD3 496 aaKnown RBP3.99□□□□□ -1.77
SCARNA20.4-201ENST00000516969 RBMY1CP0DJD4 496 aa3.99□□□□□ -1.77
SCARNA20.4-201ENST00000516969 S100A4P26447 101 aaKnown RBP3.99□□□□□ -1.77
SCARNA20.4-201ENST00000516969 CMC4P56277 68 aaPredicted RBP3.99□□□□□ -1.77
SCARNA20.4-201ENST00000516969 RBMY1FQ15415 496 aaKnown RBP3.99□□□□□ -1.77
SCARNA20.4-201ENST00000516969 SPANXN1Q5VSR9 72 aa3.99□□□□□ -1.77
SCARNA20.4-201ENST00000516969 FAM159AQ6UWV7 190 aa3.99□□□□□ -1.77
SCARNA20.4-201ENST00000516969 Q6ZWC4 215 aa3.99□□□□□ -1.77
SCARNA20.4-201ENST00000516969 ORMDL3Q8N138 153 aa3.99□□□□□ -1.77
SCARNA20.4-201ENST00000516969 DEFB125Q8N687 156 aa3.99□□□□□ -1.77
SCARNA20.4-201ENST00000516969 POM121L12Q8N7R1 296 aa3.99□□□□□ -1.77
SCARNA20.4-201ENST00000516969 LINC00482Q8N8I6 264 aa3.99□□□□□ -1.77
SCARNA20.4-201ENST00000516969 C9orf85Q96MD7 179 aa3.99□□□□□ -1.77
SCARNA20.4-201ENST00000516969 PRELID3AQ96N28 172 aa3.99□□□□□ -1.77
SCARNA20.4-201ENST00000516969 CITED1Q99966 193 aa3.99□□□□□ -1.77
SCARNA20.4-201ENST00000516969 LINC00467Q9BRT7 94 aa3.99□□□□□ -1.77
SCARNA20.4-201ENST00000516969 C19orf73Q9NVV2 129 aa3.99□□□□□ -1.77
SCARNA20.4-201ENST00000516969 LAMTOR2Q9Y2Q5 125 aa3.99□□□□□ -1.77
SCARNA20.4-201ENST00000516969 TRRAPQ9Y4A5 3859 aa3.98□□□□□ -1.77
SCARNA20.4-201ENST00000516969 OR11H12B2RN74 326 aa3.98□□□□□ -1.77
SCARNA20.4-201ENST00000516969 SPRY2O43597 315 aa3.98□□□□□ -1.77
SCARNA20.4-201ENST00000516969 SAP30O75446 220 aa3.98□□□□□ -1.77
SCARNA20.4-201ENST00000516969 GAS8-AS1O95177 125 aa3.98□□□□□ -1.77
SCARNA20.4-201ENST00000516969 NPYP01303 97 aa3.98□□□□□ -1.77
SCARNA20.4-201ENST00000516969 CD7P09564 240 aa3.98□□□□□ -1.77
SCARNA20.4-201ENST00000516969 PMCHP20382 165 aa3.98□□□□□ -1.77
SCARNA20.4-201ENST00000516969 CKS2P33552 79 aa3.98□□□□□ -1.77
SCARNA20.4-201ENST00000516969 AMTP48728 403 aa3.98□□□□□ -1.77
SCARNA20.4-201ENST00000516969 LINC00315P59091 139 aa3.98□□□□□ -1.77
SCARNA20.4-201ENST00000516969 CDPF1Q6NVV7 123 aa3.98□□□□□ -1.77
SCARNA20.4-201ENST00000516969 RNASEKQ6P5S7 137 aaKnown RBP3.98□□□□□ -1.77
SCARNA20.4-201ENST00000516969 SMIM15Q7Z3B0 74 aa3.98□□□□□ -1.77
SCARNA20.4-201ENST00000516969 TRPT1Q86TN4 253 aaKnown RBP3.98□□□□□ -1.77
SCARNA20.4-201ENST00000516969 Q8N1Y9 231 aa3.98□□□□□ -1.77
SCARNA20.4-201ENST00000516969 FAM19A2Q8N3H0 131 aa3.98□□□□□ -1.77
SCARNA20.4-201ENST00000516969 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.98□□□□□ -1.77
SCARNA20.4-201ENST00000516969 C20orf144Q9BQM9 153 aa3.98□□□□□ -1.77
SCARNA20.4-201ENST00000516969 SAMD10Q9BYL1 202 aa3.98□□□□□ -1.77
SCARNA20.4-201ENST00000516969 NIT2Q9NQR4 276 aa3.98□□□□□ -1.77
SCARNA20.4-201ENST00000516969 MDFICQ9P1T7 246 aa3.98□□□□□ -1.77
SCARNA20.4-201ENST00000516969 PHLDA3Q9Y5J5 127 aa3.98□□□□□ -1.77
SCARNA20.4-201ENST00000516969 KIF25-AS1Q9Y6Z4 181 aa3.98□□□□□ -1.77
SCARNA20.4-201ENST00000516969 IGLV2-18A0A075B6J9 118 aa3.97□□□□□ -1.77
SCARNA20.4-201ENST00000516969 CYSRT1A8MQ03 144 aa3.97□□□□□ -1.77
SCARNA20.4-201ENST00000516969 SMKR1H3BMG3 65 aa3.97□□□□□ -1.77
SCARNA20.4-201ENST00000516969 M0R381 172 aa3.97□□□□□ -1.77
SCARNA20.4-201ENST00000516969 HSBP1O75506 76 aa3.97□□□□□ -1.77
SCARNA20.4-201ENST00000516969 TNFRSF6BO95407 300 aa3.97□□□□□ -1.77
SCARNA20.4-201ENST00000516969 PF4P02776 101 aa3.97□□□□□ -1.77
SCARNA20.4-201ENST00000516969 GIG44P09565 113 aaPredicted RBP3.97□□□□□ -1.77
SCARNA20.4-201ENST00000516969 GATA1P15976 413 aaPredicted RBP3.97□□□□□ -1.77
SCARNA20.4-201ENST00000516969 IFI27P40305 119 aaPredicted RBP3.97□□□□□ -1.77
SCARNA20.4-201ENST00000516969 INSL3P51460 131 aa3.97□□□□□ -1.77
SCARNA20.4-201ENST00000516969 FXYD7P58549 80 aa3.97□□□□□ -1.77
SCARNA20.4-201ENST00000516969 NRACQ8N912 160 aa3.97□□□□□ -1.77
SCARNA20.4-201ENST00000516969 PRSS3P2Q8NHM4 247 aa3.97□□□□□ -1.77
SCARNA20.4-201ENST00000516969 PTH2Q96A98 100 aa3.97□□□□□ -1.77
SCARNA20.4-201ENST00000516969 MRAP2Q96G30 205 aa3.97□□□□□ -1.77
SCARNA20.4-201ENST00000516969 DPH3P1Q9H4G8 78 aa3.97□□□□□ -1.77
SCARNA20.4-201ENST00000516969 GSN-AS1Q9NRJ2 163 aa3.97□□□□□ -1.77
SCARNA20.4-201ENST00000516969 TIMM8BQ9Y5J9 83 aaPredicted RBP3.97□□□□□ -1.77
SCARNA20.4-201ENST00000516969 STAB1Q9NY15 2570 aa3.96□□□□□ -1.78
SCARNA20.4-201ENST00000516969 TRGV11A0A075B6L2 103 aa3.96□□□□□ -1.78
SCARNA20.4-201ENST00000516969 A0A096LNJ9 63 aa3.96□□□□□ -1.78
SCARNA20.4-201ENST00000516969 IGHV1-24A0A0C4DH33 117 aa3.96□□□□□ -1.78
SCARNA20.4-201ENST00000516969 NCR2O95944 276 aa3.96□□□□□ -1.78
SCARNA20.4-201ENST00000516969 PMCHL1Q16048 86 aa3.96□□□□□ -1.78
SCARNA20.4-201ENST00000516969 PIK3CD-AS1Q5SR53 167 aa3.96□□□□□ -1.78
SCARNA20.4-201ENST00000516969 FA2HQ7L5A8 372 aa3.96□□□□□ -1.78
SCARNA20.4-201ENST00000516969 STHQ8IWL8 128 aa3.96□□□□□ -1.78
SCARNA20.4-201ENST00000516969 C14orf178Q8N769 122 aaPredicted RBP3.96□□□□□ -1.78
SCARNA20.4-201ENST00000516969 Q8N976 141 aa3.96□□□□□ -1.78
SCARNA20.4-201ENST00000516969 WFDC9Q8NEX5 89 aa3.96□□□□□ -1.78
SCARNA20.4-201ENST00000516969 SPATA3Q8NHX4 192 aa3.96□□□□□ -1.78
SCARNA20.4-201ENST00000516969 RASL10AQ92737 203 aa3.96□□□□□ -1.78
SCARNA20.4-201ENST00000516969 AP1S3Q96PC3 154 aa3.96□□□□□ -1.78
SCARNA20.4-201ENST00000516969 MAP1LC3AQ9H492 121 aa3.96□□□□□ -1.78
SCARNA20.4-201ENST00000516969 NXT2Q9NPJ8 142 aaKnown RBP3.96□□□□□ -1.78
SCARNA20.4-201ENST00000516969 AP5S1Q9NUS5 200 aa3.96□□□□□ -1.78
SCARNA20.4-201ENST00000516969 TRAV26-2A0A0B4J265 109 aa3.95□□□□□ -1.78
SCARNA20.4-201ENST00000516969 LOC389332A0A1B0GUA5 103 aa3.95□□□□□ -1.78
SCARNA20.4-201ENST00000516969 CBY3A6NI87 242 aa3.95□□□□□ -1.78
SCARNA20.4-201ENST00000516969 WIPF1O43516 503 aa3.95□□□□□ -1.78
SCARNA20.4-201ENST00000516969 SCGB1D1O95968 90 aa3.95□□□□□ -1.78
SCARNA20.4-201ENST00000516969 INSP01308 110 aa3.95□□□□□ -1.78
SCARNA20.4-201ENST00000516969 PRM2P04554 102 aa3.95□□□□□ -1.78
SCARNA20.4-201ENST00000516969 CRYGDP07320 174 aa3.95□□□□□ -1.78
SCARNA20.4-201ENST00000516969 C3orf79P0CE67 100 aa3.95□□□□□ -1.78
SCARNA20.4-201ENST00000516969 S100A12P80511 92 aa3.95□□□□□ -1.78
SCARNA20.4-201ENST00000516969 C9orf66Q5T8R8 295 aa3.95□□□□□ -1.78
SCARNA20.4-201ENST00000516969 UFSP1Q6NVU6 142 aa3.95□□□□□ -1.78
SCARNA20.4-201ENST00000516969 TEX43Q6ZNM6 134 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms