RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 PDE6DO43924 150 aa6.09□□□□□ -1.43
PDLIM5-213ENST00000509357 IFNA1P01562 189 aa6.09□□□□□ -1.43
PDLIM5-213ENST00000509357 GZMBP10144 247 aa6.09□□□□□ -1.43
PDLIM5-213ENST00000509357 LINC01559Q495D7 138 aa6.09□□□□□ -1.43
PDLIM5-213ENST00000509357 C1orf134Q5TEV5 83 aa6.09□□□□□ -1.43
PDLIM5-213ENST00000509357 OCC1Q8TAD7 63 aa6.09□□□□□ -1.43
PDLIM5-213ENST00000509357 TXNDC17Q9BRA2 123 aa6.09□□□□□ -1.43
PDLIM5-213ENST00000509357 NDFIP1Q9BT67 221 aa6.09□□□□□ -1.43
PDLIM5-213ENST00000509357 TRGV11A0A075B6L2 103 aa6.08□□□□□ -1.44
PDLIM5-213ENST00000509357 FABP5P3A8MUU1 101 aa6.08□□□□□ -1.44
PDLIM5-213ENST00000509357 TMEM250H0YL14 139 aa6.08□□□□□ -1.44
PDLIM5-213ENST00000509357 SFTA3P0C7M3 94 aa6.08□□□□□ -1.44
PDLIM5-213ENST00000509357 CLLU1Q5K131 121 aa6.08□□□□□ -1.44
PDLIM5-213ENST00000509357 DNLZQ5SXM8 178 aa6.08□□□□□ -1.44
PDLIM5-213ENST00000509357 FAM162BQ5T6X4 162 aa6.08□□□□□ -1.44
PDLIM5-213ENST00000509357 PRR27Q6MZM9 219 aa6.08□□□□□ -1.44
PDLIM5-213ENST00000509357 JPT2Q9H910 190 aa6.08□□□□□ -1.44
PDLIM5-213ENST00000509357 SCRT2Q9NQ03 307 aa6.08□□□□□ -1.44
PDLIM5-213ENST00000509357 LINC00588Q9Y4M8 146 aa6.08□□□□□ -1.44
PDLIM5-213ENST00000509357 DNAH11Q96DT5 4516 aa6.07□□□□□ -1.44
PDLIM5-213ENST00000509357 B4DEV8 164 aa6.07□□□□□ -1.44
PDLIM5-213ENST00000509357 C9JCJ5 164 aa6.07□□□□□ -1.44
PDLIM5-213ENST00000509357 H3BVH4 76 aa6.07□□□□□ -1.44
PDLIM5-213ENST00000509357 PAX4O43316 350 aa6.07□□□□□ -1.44
PDLIM5-213ENST00000509357 S100A9P06702 114 aaKnown RBP6.07□□□□□ -1.44
PDLIM5-213ENST00000509357 Q6ZR54 194 aa6.07□□□□□ -1.44
PDLIM5-213ENST00000509357 ZNRF2Q8NHG8 242 aa6.07□□□□□ -1.44
PDLIM5-213ENST00000509357 RASL10AQ92737 203 aa6.07□□□□□ -1.44
PDLIM5-213ENST00000509357 VSIG2Q96IQ7 327 aa6.07□□□□□ -1.44
PDLIM5-213ENST00000509357 ZNF479Q96JC4 524 aa6.07□□□□□ -1.44
PDLIM5-213ENST00000509357 C18orf15Q96N68 181 aa6.07□□□□□ -1.44
PDLIM5-213ENST00000509357 EIF5A2Q9GZV4 153 aaKnown RBP6.07□□□□□ -1.44
PDLIM5-213ENST00000509357 RNASE7Q9H1E1 156 aaKnown RBP6.07□□□□□ -1.44
PDLIM5-213ENST00000509357 SDF2L1Q9HCN8 221 aa6.07□□□□□ -1.44
PDLIM5-213ENST00000509357 Q9UF83 564 aa6.07□□□□□ -1.44
PDLIM5-213ENST00000509357 TRGV4A0A0C4DH28 118 aa6.06□□□□□ -1.44
PDLIM5-213ENST00000509357 MUC21A0A0G2JKD1 596 aa6.06□□□□□ -1.44
PDLIM5-213ENST00000509357 NBDYA0A0U1RRE5 68 aa6.06□□□□□ -1.44
PDLIM5-213ENST00000509357 MUC21A0A140T8X8 626 aa6.06□□□□□ -1.44
PDLIM5-213ENST00000509357 H3BNG1 76 aa6.06□□□□□ -1.44
PDLIM5-213ENST00000509357 RTL8CO15255 209 aa6.06□□□□□ -1.44
PDLIM5-213ENST00000509357 NDUFS6O75380 124 aaKnown RBP6.06□□□□□ -1.44
PDLIM5-213ENST00000509357 ORM1P02763 201 aa6.06□□□□□ -1.44
PDLIM5-213ENST00000509357 MGST1P10620 155 aaKnown RBP6.06□□□□□ -1.44
PDLIM5-213ENST00000509357 ADCYAP1P18509 176 aa6.06□□□□□ -1.44
PDLIM5-213ENST00000509357 GNG4P50150 75 aa6.06□□□□□ -1.44
PDLIM5-213ENST00000509357 CEBPGP53567 150 aa6.06□□□□□ -1.44
PDLIM5-213ENST00000509357 SLAQ13239 276 aa6.06□□□□□ -1.44
PDLIM5-213ENST00000509357 FHL2Q14192 279 aa6.06□□□□□ -1.44
PDLIM5-213ENST00000509357 DMRTA1Q5VZB9 504 aa6.06□□□□□ -1.44
PDLIM5-213ENST00000509357 UFSP1Q6NVU6 142 aa6.06□□□□□ -1.44
PDLIM5-213ENST00000509357 Q6ZSN1 163 aa6.06□□□□□ -1.44
PDLIM5-213ENST00000509357 LINC01551Q86U37 167 aa6.06□□□□□ -1.44
PDLIM5-213ENST00000509357 NUDT10Q8NFP7 164 aa6.06□□□□□ -1.44
PDLIM5-213ENST00000509357 NUDT11Q96G61 164 aa6.06□□□□□ -1.44
PDLIM5-213ENST00000509357 KCNS1Q96KK3 526 aa6.06□□□□□ -1.44
PDLIM5-213ENST00000509357 SPXQ9BT56 116 aa6.06□□□□□ -1.44
PDLIM5-213ENST00000509357 SAMD10Q9BYL1 202 aa6.06□□□□□ -1.44
PDLIM5-213ENST00000509357 Q9H8V8 135 aa6.06□□□□□ -1.44
PDLIM5-213ENST00000509357 PRO0255Q9UI72 69 aa6.06□□□□□ -1.44
PDLIM5-213ENST00000509357 HHLA3Q9XRX5 114 aa6.06□□□□□ -1.44
PDLIM5-213ENST00000509357 ICOSQ9Y6W8 199 aa6.06□□□□□ -1.44
PDLIM5-213ENST00000509357 DYNC1H1Q14204 4646 aaKnown RBP6.06□□□□□ -1.44
PDLIM5-213ENST00000509357 HECTD4Q9Y4D8 3996 aa6.06□□□□□ -1.44
PDLIM5-213ENST00000509357 M0R2P5 195 aa6.05□□□□□ -1.44
PDLIM5-213ENST00000509357 SNAI2O43623 268 aa6.05□□□□□ -1.44
PDLIM5-213ENST00000509357 ARMS2P0C7Q2 107 aa6.05□□□□□ -1.44
PDLIM5-213ENST00000509357 IGLC6P0CF74 106 aa6.05□□□□□ -1.44
PDLIM5-213ENST00000509357 TAGLN2P37802 199 aaKnown RBP6.05□□□□□ -1.44
PDLIM5-213ENST00000509357 ESRGQ1W209 222 aa6.05□□□□□ -1.44
PDLIM5-213ENST00000509357 OR10AG1Q8NH19 301 aa6.05□□□□□ -1.44
PDLIM5-213ENST00000509357 SSBP4Q9BWG4 385 aaPredicted RBP6.05□□□□□ -1.44
PDLIM5-213ENST00000509357 IL36BQ9NZH7 164 aa6.05□□□□□ -1.44
PDLIM5-213ENST00000509357 A0A096LPF7 62 aa6.04□□□□□ -1.44
PDLIM5-213ENST00000509357 LOC100131303A0A0U1RQF7 123 aa6.04□□□□□ -1.44
PDLIM5-213ENST00000509357 NXPH4O95158 308 aa6.04□□□□□ -1.44
PDLIM5-213ENST00000509357 RPL23P62829 140 aaKnown RBP6.04□□□□□ -1.44
PDLIM5-213ENST00000509357 TTC32Q5I0X7 151 aa6.04□□□□□ -1.44
PDLIM5-213ENST00000509357 CFAP126Q5VTH2 177 aa6.04□□□□□ -1.44
PDLIM5-213ENST00000509357 C6orf223Q8N319 242 aa6.04□□□□□ -1.44
PDLIM5-213ENST00000509357 OR4C5Q8NGB2 326 aa6.04□□□□□ -1.44
PDLIM5-213ENST00000509357 GTSF1Q8WW33 167 aa6.04□□□□□ -1.44
PDLIM5-213ENST00000509357 SMIM12Q96EX1 92 aa6.04□□□□□ -1.44
PDLIM5-213ENST00000509357 SMIM7Q9BQ49 75 aa6.04□□□□□ -1.44
PDLIM5-213ENST00000509357 MSRB1Q9NZV6 116 aa6.04□□□□□ -1.44
PDLIM5-213ENST00000509357 RS1O15537 224 aa6.03□□□□□ -1.44
PDLIM5-213ENST00000509357 SRIP30626 198 aa6.03□□□□□ -1.44
PDLIM5-213ENST00000509357 ASIPP42127 132 aa6.03□□□□□ -1.44
PDLIM5-213ENST00000509357 CRYBA4P53673 196 aa6.03□□□□□ -1.44
PDLIM5-213ENST00000509357 MRPL23Q16540 153 aaKnown RBP6.03□□□□□ -1.44
PDLIM5-213ENST00000509357 ZNF876PQ49A33 203 aa6.03□□□□□ -1.44
PDLIM5-213ENST00000509357 PTH2Q96A98 100 aa6.03□□□□□ -1.44
PDLIM5-213ENST00000509357 ISOC2Q96AB3 205 aa6.03□□□□□ -1.44
PDLIM5-213ENST00000509357 MRPS16Q9Y3D3 137 aaKnown RBP6.03□□□□□ -1.44
PDLIM5-213ENST00000509357 IGHV3-73A0A0B4J1V6 119 aa6.02□□□□□ -1.45
PDLIM5-213ENST00000509357 TRAV4A0A0B4J268 109 aa6.02□□□□□ -1.45
PDLIM5-213ENST00000509357 ZNF727A8MUV8 499 aa6.02□□□□□ -1.45
PDLIM5-213ENST00000509357 CRYGDP07320 174 aa6.02□□□□□ -1.45
PDLIM5-213ENST00000509357 CXCL1P09341 107 aa6.02□□□□□ -1.45
PDLIM5-213ENST00000509357 S100A4P26447 101 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms