RNA–Protein interactions for RNA: ENST00000509346.5

GYPA-206, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 5

Gene GYPA, Length 383 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-206ENST00000509346 CCDC171Q6TFL3 1326 aa0.52□□□□□ -2.33
GYPA-206ENST00000509346 KDM5CP41229 1560 aa0.52□□□□□ -2.33
GYPA-206ENST00000509346 HELZP42694 1942 aaKnown RBP0.52□□□□□ -2.33
GYPA-206ENST00000509346 A0A096LNT2 108 aa0.51□□□□□ -2.33
GYPA-206ENST00000509346 TEX49A0A1B0GTD5 131 aa0.51□□□□□ -2.33
GYPA-206ENST00000509346 CCDC179H3BU77 68 aa0.51□□□□□ -2.33
GYPA-206ENST00000509346 J3QLW9 94 aa0.51□□□□□ -2.33
GYPA-206ENST00000509346 PITX3O75364 302 aa0.51□□□□□ -2.33
GYPA-206ENST00000509346 PRB4P10163 310 aaPredicted RBP0.51□□□□□ -2.33
GYPA-206ENST00000509346 BLMP54132 1417 aaPredicted RBP0.51□□□□□ -2.33
GYPA-206ENST00000509346 FXYD6P3P58550 94 aa0.51□□□□□ -2.33
GYPA-206ENST00000509346 KLKP1Q107X0 134 aa0.51□□□□□ -2.33
GYPA-206ENST00000509346 ZNF56Q15929 161 aa0.51□□□□□ -2.33
GYPA-206ENST00000509346 IQCJQ1A5X6 159 aa0.51□□□□□ -2.33
GYPA-206ENST00000509346 PAIP2BQ9ULR5 123 aaKnown RBP0.51□□□□□ -2.33
GYPA-206ENST00000509346 NOTCH1P46531 2555 aa0.51□□□□□ -2.33
GYPA-206ENST00000509346 TRPM7Q96QT4 1865 aa0.5□□□□□ -2.33
GYPA-206ENST00000509346 ERCC6Q03468 1493 aa0.5□□□□□ -2.33
GYPA-206ENST00000509346 TRAV17A0A0B4J275 112 aa0.5□□□□□ -2.33
GYPA-206ENST00000509346 NPFFO15130 113 aa0.5□□□□□ -2.33
GYPA-206ENST00000509346 SLC25A6P12236 298 aa0.5□□□□□ -2.33
GYPA-206ENST00000509346 ZNF137PP52743 207 aa0.5□□□□□ -2.33
GYPA-206ENST00000509346 RPL37P61927 97 aaKnown RBP0.5□□□□□ -2.33
GYPA-206ENST00000509346 OR2T2Q6IF00 324 aa0.5□□□□□ -2.33
GYPA-206ENST00000509346 CDK12Q9NYV4 1490 aaPredicted RBP0.49□□□□□ -2.33
GYPA-206ENST00000509346 COX4I1P13073 169 aa0.49□□□□□ -2.33
GYPA-206ENST00000509346 SPINT3P49223 89 aa0.49□□□□□ -2.33
GYPA-206ENST00000509346 ARPC4P59998 168 aa0.49□□□□□ -2.33
GYPA-206ENST00000509346 RPS25P62851 125 aaKnown RBP0.49□□□□□ -2.33
GYPA-206ENST00000509346 PFDN5Q99471 154 aa0.49□□□□□ -2.33
GYPA-206ENST00000509346 TPT1P8Q9HAU6 139 aa0.49□□□□□ -2.33
GYPA-206ENST00000509346 ERG28Q9UKR5 140 aa0.49□□□□□ -2.33
GYPA-206ENST00000509346 CASZ1Q86V15 1759 aa0.49□□□□□ -2.33
GYPA-206ENST00000509346 SPTBP11277 2137 aa0.49□□□□□ -2.33
GYPA-206ENST00000509346 ADGRB1O14514 1584 aa0.49□□□□□ -2.33
GYPA-206ENST00000509346 APOC1P02654 83 aa0.48□□□□□ -2.33
GYPA-206ENST00000509346 HMGN1P05114 100 aa0.48□□□□□ -2.33
GYPA-206ENST00000509346 LINC01545Q5VT33 79 aa0.48□□□□□ -2.33
GYPA-206ENST00000509346 SPATA8Q6RVD6 105 aa0.48□□□□□ -2.33
GYPA-206ENST00000509346 SCIMPQ6UWF3 145 aa0.48□□□□□ -2.33
GYPA-206ENST00000509346 TSTD1Q8NFU3 115 aa0.48□□□□□ -2.33
GYPA-206ENST00000509346 VSTM2AQ8TAG5 236 aa0.48□□□□□ -2.33
GYPA-206ENST00000509346 TCEAL4Q96EI5 215 aa0.48□□□□□ -2.33
GYPA-206ENST00000509346 SDF2Q99470 211 aa0.48□□□□□ -2.33
GYPA-206ENST00000509346 TMEM14BQ9NUH8 114 aa0.48□□□□□ -2.33
GYPA-206ENST00000509346 CDK5RAP2Q96SN8 1893 aa0.48□□□□□ -2.33
GYPA-206ENST00000509346 PTPRMP28827 1452 aa0.48□□□□□ -2.33
GYPA-206ENST00000509346 SOGA1O94964 1423 aa0.47□□□□□ -2.33
GYPA-206ENST00000509346 DLEC1Q9Y238 1755 aa0.47□□□□□ -2.33
GYPA-206ENST00000509346 ATG2AQ2TAZ0 1938 aa0.47□□□□□ -2.33
GYPA-206ENST00000509346 TRAV12-2A0A075B6T6 113 aa0.47□□□□□ -2.33
GYPA-206ENST00000509346 ZNF670-ZNF695F2Z2N8 137 aa0.47□□□□□ -2.33
GYPA-206ENST00000509346 K7ERU9 68 aa0.47□□□□□ -2.33
GYPA-206ENST00000509346 FXYD1O00168 92 aa0.47□□□□□ -2.33
GYPA-206ENST00000509346 NDUFA2O43678 99 aa0.47□□□□□ -2.33
GYPA-206ENST00000509346 LY6G6CO95867 125 aa0.47□□□□□ -2.33
GYPA-206ENST00000509346 PYYP10082 97 aa0.47□□□□□ -2.33
GYPA-206ENST00000509346 EMX2Q04743 252 aa0.47□□□□□ -2.33
GYPA-206ENST00000509346 C6orf52Q5T4I8 152 aa0.47□□□□□ -2.33
GYPA-206ENST00000509346 MIC13Q5XKP0 118 aa0.47□□□□□ -2.33
GYPA-206ENST00000509346 IFI27L1Q96BM0 104 aa0.47□□□□□ -2.33
GYPA-206ENST00000509346 NDUFA12Q9UI09 145 aa0.47□□□□□ -2.33
GYPA-206ENST00000509346 PLXNA2O75051 1894 aa0.47□□□□□ -2.33
GYPA-206ENST00000509346 TFF1P04155 84 aa0.46□□□□□ -2.34
GYPA-206ENST00000509346 ELOF1P60002 83 aaKnown RBP0.46□□□□□ -2.34
GYPA-206ENST00000509346 COPZ1P61923 177 aa0.46□□□□□ -2.34
GYPA-206ENST00000509346 SPCS2Q15005 226 aa0.46□□□□□ -2.34
GYPA-206ENST00000509346 Q6ZUT4 128 aa0.46□□□□□ -2.34
GYPA-206ENST00000509346 TSKUQ8WUA8 353 aa0.46□□□□□ -2.34
GYPA-206ENST00000509346 PPP1R1CQ8WVI7 109 aa0.46□□□□□ -2.34
GYPA-206ENST00000509346 FAM103A1Q9BTL3 118 aaKnown RBP0.46□□□□□ -2.34
GYPA-206ENST00000509346 TMEM191AQ9H0A3 160 aa0.46□□□□□ -2.34
GYPA-206ENST00000509346 BET1LQ9NYM9 111 aa0.46□□□□□ -2.34
GYPA-206ENST00000509346 TMEM2Q9UHN6 1383 aa0.45□□□□□ -2.34
GYPA-206ENST00000509346 MEGF8Q7Z7M0 2845 aa0.45□□□□□ -2.34
GYPA-206ENST00000509346 M0R129 80 aa0.45□□□□□ -2.34
GYPA-206ENST00000509346 GUCA1AP43080 201 aaPredicted RBP0.45□□□□□ -2.34
GYPA-206ENST00000509346 CCDC58Q4VC31 144 aa0.45□□□□□ -2.34
GYPA-206ENST00000509346 SPANXN1Q5VSR9 72 aa0.45□□□□□ -2.34
GYPA-206ENST00000509346 TMEM141Q96I45 108 aa0.45□□□□□ -2.34
GYPA-206ENST00000509346 COA4Q9NYJ1 87 aa0.45□□□□□ -2.34
GYPA-206ENST00000509346 RREB1Q92766 1687 aa0.45□□□□□ -2.34
GYPA-206ENST00000509346 SPAG17Q6Q759 2223 aa0.45□□□□□ -2.34
GYPA-206ENST00000509346 ZDBF2Q9HCK1 2354 aa0.45□□□□□ -2.34
GYPA-206ENST00000509346 AFDNP55196 1824 aaKnown RBP0.44□□□□□ -2.34
GYPA-206ENST00000509346 MCRIP1C9JLW8 97 aa0.44□□□□□ -2.34
GYPA-206ENST00000509346 PIRTP0C851 137 aa0.44□□□□□ -2.34
GYPA-206ENST00000509346 NPC2P61916 151 aa0.44□□□□□ -2.34
GYPA-206ENST00000509346 RRAS2P62070 204 aaPredicted RBP0.44□□□□□ -2.34
GYPA-206ENST00000509346 SELENOWP63302 87 aa0.44□□□□□ -2.34
GYPA-206ENST00000509346 C9orf116Q5BN46 136 aaPredicted RBP0.44□□□□□ -2.34
GYPA-206ENST00000509346 DPH3Q96FX2 82 aa0.44□□□□□ -2.34
GYPA-206ENST00000509346 AHNAKQ09666 5890 aaKnown RBP0.43□□□□□ -2.34
GYPA-206ENST00000509346 FRAS1Q86XX4 4008 aa0.43□□□□□ -2.34
GYPA-206ENST00000509346 A0A087WTM6 91 aa0.43□□□□□ -2.34
GYPA-206ENST00000509346 TRAV12-3A0A0B4J271 114 aa0.43□□□□□ -2.34
GYPA-206ENST00000509346 TCRBV3S1A0A5B6 114 aa0.43□□□□□ -2.34
GYPA-206ENST00000509346 CCL3L1P16619 93 aa0.43□□□□□ -2.34
GYPA-206ENST00000509346 SPINK7P58062 85 aa0.43□□□□□ -2.34
GYPA-206ENST00000509346 SSBP1Q04837 148 aaKnown RBP0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms